RNA–Protein interactions for RNA: ENST00000435218.6

TMEM40-204, Transcript of transmembrane protein 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM40, Length 1,547 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-204ENST00000435218 ZNF813Q6ZN06 617 aa13.24□□□□□ -0.29
TMEM40-204ENST00000435218 Q6ZT83 130 aa13.24□□□□□ -0.29
TMEM40-204ENST00000435218 DOLPP1Q86YN1 238 aa13.24□□□□□ -0.29
TMEM40-204ENST00000435218 UBE2J2Q8N2K1 259 aa13.24□□□□□ -0.29
TMEM40-204ENST00000435218 RPL3LQ92901 407 aaKnown RBP13.24□□□□□ -0.29
TMEM40-204ENST00000435218 FBXO17Q96EF6 278 aa13.24□□□□□ -0.29
TMEM40-204ENST00000435218 BOD1Q96IK1 185 aa13.24□□□□□ -0.29
TMEM40-204ENST00000435218 SSR3Q9UNL2 185 aa13.24□□□□□ -0.29
TMEM40-204ENST00000435218 ARPC4-TTLL3A0A0A6YYG9 625 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 PNMA8CA0A1B0GUJ8 204 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 RER1O15258 196 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 SLC19A2O60779 497 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 CGAP01215 116 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 ITGA5P08648 1049 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 PSMB10P40306 273 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 GDI2P50395 445 aaKnown RBP13.23□□□□□ -0.29
TMEM40-204ENST00000435218 MMP16P51512 607 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 PER3P56645 1201 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 NANOS3P60323 173 aaKnown RBP13.23□□□□□ -0.29
TMEM40-204ENST00000435218 GRB2P62993 217 aaKnown RBP13.23□□□□□ -0.29
TMEM40-204ENST00000435218 ARF1P84077 181 aaKnown RBP13.23□□□□□ -0.29
TMEM40-204ENST00000435218 OR7E24Q6IFN5 339 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 ZNF544Q6NX49 715 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 ARL9Q6T311 187 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.23□□□□□ -0.29
TMEM40-204ENST00000435218 LRRC18Q8N456 261 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 OR2G2Q8NGZ5 317 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 GHSRQ92847 366 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 CHCHD6Q9BRQ6 235 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 PTTG2Q9NZH5 202 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 FRRS1LQ9P0K9 344 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 R4GMQ9 66 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 TMEM212A6NML5 194 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 TTLL8A6PVC2 850 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 RPP14O95059 124 aaKnown RBP13.23□□□□□ -0.29
TMEM40-204ENST00000435218 MMP7P09237 267 aaPredicted RBP13.23□□□□□ -0.29
TMEM40-204ENST00000435218 TMIGD3P0DMS9 266 aaPredicted RBP13.23□□□□□ -0.29
TMEM40-204ENST00000435218 CD8BP10966 210 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 NR4A1P22736 598 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 OTX1P32242 354 aaPredicted RBP13.23□□□□□ -0.29
TMEM40-204ENST00000435218 FOXG1P55316 489 aaPredicted RBP13.23□□□□□ -0.29
TMEM40-204ENST00000435218 FABP5Q01469 135 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 FOXF2Q12947 444 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 NFATC3Q12968 1075 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 RAB35Q15286 201 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 ZNF829Q3KNS6 432 aaPredicted RBP13.23□□□□□ -0.29
TMEM40-204ENST00000435218 CCDC92Q53HC0 331 aaPredicted RBP13.23□□□□□ -0.29
TMEM40-204ENST00000435218 ELFN2Q5R3F8 820 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 ANKRD16Q6P6B7 361 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 VWA1Q6PCB0 445 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 KLHL24Q6TFL4 600 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 SLC16A14Q7RTX9 510 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 DPPA2Q7Z7J5 298 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 CATSPERDQ86XM0 798 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 SKA3Q8IX90 412 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 CNEP1R1Q8N9A8 125 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 ST6GALNAC3Q8NDV1 305 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 OR1K1Q8NGR3 316 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 HSD17B8Q92506 261 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 C4orf45Q96LM5 186 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 ATF6BQ99941 703 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 SH3GL3Q99963 347 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 CENPOQ9BU64 300 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 HDHD2Q9H0R4 259 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 KCNN2Q9H2S1 579 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 CENPMQ9NSP4 180 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 TXNL4BQ9NX01 149 aaKnown RBP13.23□□□□□ -0.29
TMEM40-204ENST00000435218 ATPIF1Q9UII2 106 aa13.23□□□□□ -0.29
TMEM40-204ENST00000435218 OR4C45A6NMZ5 311 aa13.22□□□□□ -0.29
TMEM40-204ENST00000435218 RGS9O75916 674 aaPredicted RBP13.22□□□□□ -0.29
TMEM40-204ENST00000435218 ZFPL1O95159 310 aa13.22□□□□□ -0.29
TMEM40-204ENST00000435218 IL18BPO95998 194 aa13.22□□□□□ -0.29
TMEM40-204ENST00000435218 PNPP00491 289 aa13.22□□□□□ -0.29
TMEM40-204ENST00000435218 SPTA1P02549 2419 aa13.22□□□□□ -0.29
TMEM40-204ENST00000435218 GLI4P10075 376 aa13.22□□□□□ -0.29
TMEM40-204ENST00000435218 COX5AP20674 150 aa13.22□□□□□ -0.29
TMEM40-204ENST00000435218 UGT2B10P36537 528 aa13.22□□□□□ -0.29
TMEM40-204ENST00000435218 ATRXP46100 2492 aa13.22□□□□□ -0.29
TMEM40-204ENST00000435218 PSMA6P60900 246 aaKnown RBP13.22□□□□□ -0.29
TMEM40-204ENST00000435218 VBP1P61758 197 aa13.22□□□□□ -0.29
TMEM40-204ENST00000435218 NCS1P62166 190 aa13.22□□□□□ -0.29
TMEM40-204ENST00000435218 SLC3A1Q07837 685 aa13.22□□□□□ -0.29
TMEM40-204ENST00000435218 ECH1Q13011 328 aa13.22□□□□□ -0.29
TMEM40-204ENST00000435218 LY6DQ14210 128 aa13.22□□□□□ -0.29
TMEM40-204ENST00000435218 SPCS2Q15005 226 aa13.22□□□□□ -0.29
TMEM40-204ENST00000435218 SLC36A2Q495M3 483 aa13.22□□□□□ -0.29
TMEM40-204ENST00000435218 YIF1BQ5BJH7 314 aa13.22□□□□□ -0.29
TMEM40-204ENST00000435218 SPATC1Q76KD6 591 aa13.22□□□□□ -0.29
TMEM40-204ENST00000435218 IL17RDQ8NFM7 739 aa13.22□□□□□ -0.29
TMEM40-204ENST00000435218 STARD4Q96DR4 205 aa13.22□□□□□ -0.29
TMEM40-204ENST00000435218 TRMT61AQ96FX7 289 aaKnown RBP13.22□□□□□ -0.29
TMEM40-204ENST00000435218 TMED9Q9BVK6 235 aa13.22□□□□□ -0.29
TMEM40-204ENST00000435218 SFXN3Q9BWM7 321 aa13.22□□□□□ -0.29
TMEM40-204ENST00000435218 MOB1AQ9H8S9 216 aa13.22□□□□□ -0.29
TMEM40-204ENST00000435218 ZNF224Q9NZL3 707 aa13.22□□□□□ -0.29
TMEM40-204ENST00000435218 FBXL3Q9UKT7 428 aa13.22□□□□□ -0.29
TMEM40-204ENST00000435218 ZNF281Q9Y2X9 895 aa13.22□□□□□ -0.29
TMEM40-204ENST00000435218 TIMM10BQ9Y5J6 103 aa13.22□□□□□ -0.29
TMEM40-204ENST00000435218 USP24Q9UPU5 2620 aa13.21□□□□□ -0.29
TMEM40-204ENST00000435218 LOC100506127A0A0U1RQW1 187 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms