RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 HRASLSQ9HDD0 168 aa10.24□□□□□ -0.77
CLDN4-202ENST00000431918 ALKBH4Q9NXW9 302 aa10.24□□□□□ -0.77
CLDN4-202ENST00000431918 UBQLN2Q9UHD9 624 aa10.24□□□□□ -0.77
CLDN4-202ENST00000431918 DNAH14Q0VDD8 3507 aa10.24□□□□□ -0.77
CLDN4-202ENST00000431918 CACNA1GO43497 2377 aa10.24□□□□□ -0.77
CLDN4-202ENST00000431918 PRR32B1ATL7 298 aa10.24□□□□□ -0.77
CLDN4-202ENST00000431918 GABARAPH6UMI1 98 aa10.24□□□□□ -0.77
CLDN4-202ENST00000431918 L7N2F9 121 aa10.24□□□□□ -0.77
CLDN4-202ENST00000431918 M0QYG6 137 aa10.24□□□□□ -0.77
CLDN4-202ENST00000431918 INSM1Q01101 510 aaPredicted RBP10.24□□□□□ -0.77
CLDN4-202ENST00000431918 DEFA5Q01523 94 aa10.24□□□□□ -0.77
CLDN4-202ENST00000431918 OPN5Q6U736 354 aa10.24□□□□□ -0.77
CLDN4-202ENST00000431918 FIP1L1Q6UN15 594 aaKnown RBP10.24□□□□□ -0.77
CLDN4-202ENST00000431918 CDC20BQ86Y33 519 aa10.24□□□□□ -0.77
CLDN4-202ENST00000431918 STX12Q86Y82 276 aa10.24□□□□□ -0.77
CLDN4-202ENST00000431918 HAVCR2Q8TDQ0 301 aa10.24□□□□□ -0.77
CLDN4-202ENST00000431918 DNASE2BQ8WZ79 361 aa10.24□□□□□ -0.77
CLDN4-202ENST00000431918 OR2M2Q96R28 347 aa10.24□□□□□ -0.77
CLDN4-202ENST00000431918 MARVELD1Q9BSK0 173 aa10.24□□□□□ -0.77
CLDN4-202ENST00000431918 RANBP3Q9H6Z4 567 aaPredicted RBP10.24□□□□□ -0.77
CLDN4-202ENST00000431918 ANKUB1A6NFN9 424 aa10.24□□□□□ -0.77
CLDN4-202ENST00000431918 OR4C45A6NMZ5 311 aa10.24□□□□□ -0.77
CLDN4-202ENST00000431918 J3QRE1 110 aa10.24□□□□□ -0.77
CLDN4-202ENST00000431918 GPR171O14626 319 aa10.24□□□□□ -0.77
CLDN4-202ENST00000431918 SIX6O95475 246 aa10.24□□□□□ -0.77
CLDN4-202ENST00000431918 APOC1P02654 83 aa10.24□□□□□ -0.77
CLDN4-202ENST00000431918 APOC3P02656 99 aa10.24□□□□□ -0.77
CLDN4-202ENST00000431918 ALDOBP05062 364 aa10.24□□□□□ -0.77
CLDN4-202ENST00000431918 TRAPPC2P0DI81 140 aa10.24□□□□□ -0.77
CLDN4-202ENST00000431918 TRAPPC2BP0DI82 140 aa10.24□□□□□ -0.77
CLDN4-202ENST00000431918 TCN2P20062 427 aa10.24□□□□□ -0.77
CLDN4-202ENST00000431918 RAB3AP20336 220 aa10.24□□□□□ -0.77
CLDN4-202ENST00000431918 CSNK1A1P48729 337 aa10.24□□□□□ -0.77
CLDN4-202ENST00000431918 MMP15P51511 669 aa10.24□□□□□ -0.77
CLDN4-202ENST00000431918 C3orf33Q6P1S2 294 aa10.24□□□□□ -0.77
CLDN4-202ENST00000431918 RPS19BP1Q86WX3 136 aaKnown RBP10.24□□□□□ -0.77
CLDN4-202ENST00000431918 ARMC10Q8N2F6 343 aa10.24□□□□□ -0.77
CLDN4-202ENST00000431918 LILRB2Q8N423 598 aa10.24□□□□□ -0.77
CLDN4-202ENST00000431918 SLAMF6Q96DU3 332 aa10.24□□□□□ -0.77
CLDN4-202ENST00000431918 SLC6A7Q99884 636 aa10.24□□□□□ -0.77
CLDN4-202ENST00000431918 JAM3Q9BX67 310 aa10.24□□□□□ -0.77
CLDN4-202ENST00000431918 NIPAL2Q9H841 368 aa10.24□□□□□ -0.77
CLDN4-202ENST00000431918 ZNF208O43345 1280 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 CER1O95813 267 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 S100A6P06703 90 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 SLC6A1P30531 599 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 FOXK1P85037 733 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 C5orf46Q6UWT4 87 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 STK35Q8TDR2 534 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 ZNF285Q96NJ3 590 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 NPAS1Q99742 590 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 ADAM19Q9H013 955 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 PLEK2Q9NYT0 353 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 DNAJC13O75165 2243 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 IGKV3D-11A0A0A0MRZ8 115 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 A0A1B0GTQ1 180 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 MEGF11A6BM72 1044 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 LIMK1P53667 647 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 GMFBP60983 142 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 MFGE8Q08431 387 aaPredicted RBP10.23□□□□□ -0.77
CLDN4-202ENST00000431918 AANATQ16613 207 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 SLC22A6Q4U2R8 563 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 KCTD9Q7L273 389 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 FAM122BQ7Z309 247 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 OR1J4Q8NGS1 313 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 C11orf40Q8WZ69 217 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 SPACA9Q96E40 222 aaPredicted RBP10.23□□□□□ -0.77
CLDN4-202ENST00000431918 SFXN2Q96NB2 322 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 RAB33BQ9H082 229 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 PHF3Q92576 2039 aaKnown RBP10.23□□□□□ -0.77
CLDN4-202ENST00000431918 QDPRP09417 244 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 RAD52P43351 418 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 RPS18P62269 152 aaKnown RBP10.23□□□□□ -0.77
CLDN4-202ENST00000431918 RPS4XP62701 263 aaKnown RBP10.23□□□□□ -0.77
CLDN4-202ENST00000431918 GGTLC2Q14390 218 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 ZBTB37Q5TC79 503 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 METTL11BQ5VVY1 283 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 ZNF574Q6ZN55 896 aaPredicted RBP10.23□□□□□ -0.77
CLDN4-202ENST00000431918 PXKQ7Z7A4 578 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 YRDCQ86U90 279 aaKnown RBP10.23□□□□□ -0.77
CLDN4-202ENST00000431918 ZNF454Q8N9F8 522 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 DUSP18Q8NEJ0 188 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 RBPMSQ93062 196 aaKnown RBP10.23□□□□□ -0.77
CLDN4-202ENST00000431918 MRI1Q9BV20 369 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 POTEKPQ9BYX7 375 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 UPB1Q9UBR1 384 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 PFDN2Q9UHV9 154 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 SCP2D1Q9UJQ7 156 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 FBXL2Q9UKC9 423 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 PLEKHA6Q9Y2H5 1048 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 WIF1Q9Y5W5 379 aa10.23□□□□□ -0.77
CLDN4-202ENST00000431918 SGCEO43556 437 aa10.22□□□□□ -0.77
CLDN4-202ENST00000431918 C1QBP02746 253 aa10.22□□□□□ -0.77
CLDN4-202ENST00000431918 GLAP06280 429 aa10.22□□□□□ -0.77
CLDN4-202ENST00000431918 ZNF28P17035 718 aa10.22□□□□□ -0.77
CLDN4-202ENST00000431918 SSR4P51571 173 aa10.22□□□□□ -0.77
CLDN4-202ENST00000431918 AGFG1P52594 562 aaKnown RBP10.22□□□□□ -0.77
CLDN4-202ENST00000431918 BTN2A1Q7KYR7 527 aa10.22□□□□□ -0.77
CLDN4-202ENST00000431918 ZNF680Q8NEM1 530 aa10.22□□□□□ -0.77
CLDN4-202ENST00000431918 OR51S1Q8NGJ8 323 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms