RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 H2AFB2P0C5Z0 115 aa11.42□□□□□ -0.58
DDX56-204ENST00000431640 PGA4P0DJD7 388 aa11.42□□□□□ -0.58
DDX56-204ENST00000431640 PGA3P0DJD8 388 aa11.42□□□□□ -0.58
DDX56-204ENST00000431640 GIFP27352 417 aa11.42□□□□□ -0.58
DDX56-204ENST00000431640 ERP29P30040 261 aaKnown RBP11.42□□□□□ -0.58
DDX56-204ENST00000431640 PLA2G5P39877 138 aa11.42□□□□□ -0.58
DDX56-204ENST00000431640 DNASE1L1P49184 302 aa11.42□□□□□ -0.58
DDX56-204ENST00000431640 P2RY4P51582 365 aa11.42□□□□□ -0.58
DDX56-204ENST00000431640 NKX2-5P52952 324 aaPredicted RBP11.42□□□□□ -0.58
DDX56-204ENST00000431640 CD83Q01151 205 aa11.42□□□□□ -0.58
DDX56-204ENST00000431640 FOXC1Q12948 553 aa11.42□□□□□ -0.58
DDX56-204ENST00000431640 SSPNQ14714 243 aa11.42□□□□□ -0.58
DDX56-204ENST00000431640 INPP5JQ15735 1006 aaPredicted RBP11.42□□□□□ -0.58
DDX56-204ENST00000431640 NDUFA5Q16718 116 aa11.42□□□□□ -0.58
DDX56-204ENST00000431640 PRAMEF20Q5VT98 475 aa11.42□□□□□ -0.58
DDX56-204ENST00000431640 ANKRD16Q6P6B7 361 aa11.42□□□□□ -0.58
DDX56-204ENST00000431640 C6orf15Q6UXA7 325 aaPredicted RBP11.42□□□□□ -0.58
DDX56-204ENST00000431640 IZUMO1Q8IYV9 350 aa11.42□□□□□ -0.58
DDX56-204ENST00000431640 NOXO1Q8NFA2 376 aa11.42□□□□□ -0.58
DDX56-204ENST00000431640 OR56B4Q8NH76 319 aa11.42□□□□□ -0.58
DDX56-204ENST00000431640 CAPSLQ8WWF8 208 aa11.42□□□□□ -0.58
DDX56-204ENST00000431640 SCMH1Q96GD3 660 aa11.42□□□□□ -0.58
DDX56-204ENST00000431640 OR2M2Q96R28 347 aa11.42□□□□□ -0.58
DDX56-204ENST00000431640 NAA11Q9BSU3 229 aaPredicted RBP11.42□□□□□ -0.58
DDX56-204ENST00000431640 EMC6Q9BV81 110 aa11.42□□□□□ -0.58
DDX56-204ENST00000431640 MED28Q9H204 178 aa11.42□□□□□ -0.58
DDX56-204ENST00000431640 SH2D2AQ9NP31 389 aa11.42□□□□□ -0.58
DDX56-204ENST00000431640 G6PC2Q9NQR9 355 aa11.42□□□□□ -0.58
DDX56-204ENST00000431640 CENPMQ9NSP4 180 aa11.42□□□□□ -0.58
DDX56-204ENST00000431640 HPF1Q9NWY4 346 aa11.42□□□□□ -0.58
DDX56-204ENST00000431640 TAS2R8Q9NYW2 309 aa11.42□□□□□ -0.58
DDX56-204ENST00000431640 EMC3Q9P0I2 261 aa11.42□□□□□ -0.58
DDX56-204ENST00000431640 EMC9Q9Y3B6 208 aa11.42□□□□□ -0.58
DDX56-204ENST00000431640 HRH3Q9Y5N1 445 aa11.42□□□□□ -0.58
DDX56-204ENST00000431640 LOC100289279A0A1B0GTE1 492 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 LOC101059948A0A1B0GTJ6 334 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 A0A1W2PNR3 127 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 GJE1A6NN92 205 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 GLSO94925 669 aaPredicted RBP11.41□□□□□ -0.58
DDX56-204ENST00000431640 ADRB1P08588 477 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 LIFP15018 202 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 ZNF17P17021 662 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 IGFBP3P17936 291 aaPredicted RBP11.41□□□□□ -0.58
DDX56-204ENST00000431640 CDK2P24941 298 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 TAS2R20P59543 309 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 MFGE8Q08431 387 aaPredicted RBP11.41□□□□□ -0.58
DDX56-204ENST00000431640 CHAF1BQ13112 559 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 SRSF6Q13247 344 aaKnown RBP11.41□□□□□ -0.58
DDX56-204ENST00000431640 MAB21L1Q13394 359 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 KCNMB1Q16558 191 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 C2orf76Q3KRA6 126 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 ELFN2Q5R3F8 820 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 BCL2L15Q5TBC7 163 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 SLC25A47Q6Q0C1 308 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 IGF2-ASQ6U949 168 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 DNM1P46Q6ZS02 220 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 GPAT4Q86UL3 456 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 LINC00346Q8IVM7 164 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 SERPINA12Q8IW75 414 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 DNAAF1Q8NEP3 725 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 OR5M1Q8NGP8 315 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 OR13C3Q8NGS6 347 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 OR52I2Q8NH67 350 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 FAM3DQ96BQ1 224 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 SLAMF6Q96DU3 332 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 TMEM41AQ96HV5 264 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 DMRTB1Q96MA1 342 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 ZNF160Q9HCG1 818 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 NUDT15Q9NV35 164 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 STMN3Q9NZ72 180 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 MRPS18BQ9Y676 258 aaKnown RBP11.41□□□□□ -0.58
DDX56-204ENST00000431640 CFAP47Q6ZTR5 3102 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 PIEZO1Q92508 2521 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 A0A0A6YYJ9 748 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 IGKV1D-43A0A0B4J1Z2 117 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 A0A1W2PPL8 197 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 ANKRD20A5PA0PJZ0 165 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 A8MV72 311 aaPredicted RBP11.41□□□□□ -0.58
DDX56-204ENST00000431640 RGS13O14921 159 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 TRAF3IP2O43734 574 aaPredicted RBP11.41□□□□□ -0.58
DDX56-204ENST00000431640 RAD1O60671 282 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 RBBP9O75884 186 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 CELA2AP08217 269 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 SFTPDP35247 375 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 GUCA1AP43080 201 aaPredicted RBP11.41□□□□□ -0.58
DDX56-204ENST00000431640 CSNK2A1P68400 391 aaPredicted RBP11.41□□□□□ -0.58
DDX56-204ENST00000431640 CAMK2DQ13557 499 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 TGIF1Q15583 401 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 HIST3H3Q16695 136 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 RNASE12Q5GAN4 147 aaKnown RBP11.41□□□□□ -0.58
DDX56-204ENST00000431640 OTPQ5XKR4 325 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 CD276Q5ZPR3 534 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 FAM166AQ6J272 317 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 MDGA2Q7Z553 956 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 DTX1Q86Y01 620 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 NKAIN3Q8N8D7 197 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 PPP1R14AQ96A00 147 aa11.41□□□□□ -0.58
DDX56-204ENST00000431640 FYTTD1Q96QD9 318 aaKnown RBP11.41□□□□□ -0.58
DDX56-204ENST00000431640 TP63Q9H3D4 680 aaPredicted RBP11.41□□□□□ -0.58
DDX56-204ENST00000431640 TMEM185BQ9H7F4 350 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms