RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 GADD45AP24522 165 aa16.01■□□□□ 0.15
HMGN1-206ENST00000431390 TIMP3P35625 211 aa16.01■□□□□ 0.15
HMGN1-206ENST00000431390 KIR2DL2P43627 348 aaPredicted RBP16.01■□□□□ 0.15
HMGN1-206ENST00000431390 RIDAP52758 137 aaKnown RBP16.01■□□□□ 0.15
HMGN1-206ENST00000431390 RBPJQ06330 500 aa16.01■□□□□ 0.15
HMGN1-206ENST00000431390 CTF1Q16619 201 aa16.01■□□□□ 0.15
HMGN1-206ENST00000431390 LRRN1Q6UXK5 716 aa16.01■□□□□ 0.15
HMGN1-206ENST00000431390 SEM1Q6ZVN7 128 aa16.01■□□□□ 0.15
HMGN1-206ENST00000431390 UBE2J2Q8N2K1 259 aa16.01■□□□□ 0.15
HMGN1-206ENST00000431390 SLAMF6Q96DU3 332 aa16.01■□□□□ 0.15
HMGN1-206ENST00000431390 ELOVL3Q9HB03 270 aa16.01■□□□□ 0.15
HMGN1-206ENST00000431390 PRSS50Q9UI38 385 aa16.01■□□□□ 0.15
HMGN1-206ENST00000431390 STUB1Q9UNE7 303 aa16.01■□□□□ 0.15
HMGN1-206ENST00000431390 SIRT4Q9Y6E7 314 aaPredicted RBP16.01■□□□□ 0.15
HMGN1-206ENST00000431390 NCOA6Q14686 2063 aaPredicted RBP16.01■□□□□ 0.15
HMGN1-206ENST00000431390 MYO9AB2RTY4 2548 aa16.01■□□□□ 0.15
HMGN1-206ENST00000431390 UNC79Q9P2D8 2635 aa16.01■□□□□ 0.15
HMGN1-206ENST00000431390 PNMA8CA0A1B0GUJ8 204 aa16■□□□□ 0.15
HMGN1-206ENST00000431390 AIREO43918 545 aa16■□□□□ 0.15
HMGN1-206ENST00000431390 OPRL1P41146 370 aa16■□□□□ 0.15
HMGN1-206ENST00000431390 PER3P56645 1201 aa16■□□□□ 0.15
HMGN1-206ENST00000431390 HIST1H3AP68431 136 aa16■□□□□ 0.15
HMGN1-206ENST00000431390 FAPQ12884 760 aa16■□□□□ 0.15
HMGN1-206ENST00000431390 CDK5R1Q15078 307 aa16■□□□□ 0.15
HMGN1-206ENST00000431390 HIST2H3PS2Q5TEC6 136 aa16■□□□□ 0.15
HMGN1-206ENST00000431390 DMKNQ6E0U4 476 aaPredicted RBP16■□□□□ 0.15
HMGN1-206ENST00000431390 TFAP2EQ6VUC0 442 aa16■□□□□ 0.15
HMGN1-206ENST00000431390 GDPGP1Q6ZNW5 385 aa16■□□□□ 0.15
HMGN1-206ENST00000431390 HIST2H3AQ71DI3 136 aa16■□□□□ 0.15
HMGN1-206ENST00000431390 SYT9Q86SS6 491 aa16■□□□□ 0.15
HMGN1-206ENST00000431390 SLC22A24Q8N4F4 322 aa16■□□□□ 0.15
HMGN1-206ENST00000431390 GJC3Q8NFK1 279 aa16■□□□□ 0.15
HMGN1-206ENST00000431390 RPS4Y2Q8TD47 263 aa16■□□□□ 0.15
HMGN1-206ENST00000431390 HTRA1Q92743 480 aa16■□□□□ 0.15
HMGN1-206ENST00000431390 SMIM19Q96E16 107 aa16■□□□□ 0.15
HMGN1-206ENST00000431390 GRIP1Q9Y3R0 1128 aa16■□□□□ 0.15
HMGN1-206ENST00000431390 LRP12Q9Y561 859 aa16■□□□□ 0.15
HMGN1-206ENST00000431390 ZNF878C9JN71 531 aa16■□□□□ 0.15
HMGN1-206ENST00000431390 SLC19A2O60779 497 aa16■□□□□ 0.15
HMGN1-206ENST00000431390 FARS2O95363 451 aaKnown RBP16■□□□□ 0.15
HMGN1-206ENST00000431390 WNT11O96014 354 aa16■□□□□ 0.15
HMGN1-206ENST00000431390 B4GALT1P15291 398 aa16■□□□□ 0.15
HMGN1-206ENST00000431390 MPGP29372 298 aa16■□□□□ 0.15
HMGN1-206ENST00000431390 DCTDP32321 178 aa16■□□□□ 0.15
HMGN1-206ENST00000431390 SH3BGRP55822 239 aaPredicted RBP16■□□□□ 0.15
HMGN1-206ENST00000431390 TRAM1Q15629 374 aa16■□□□□ 0.15
HMGN1-206ENST00000431390 FDX2Q6P4F2 183 aa16■□□□□ 0.15
HMGN1-206ENST00000431390 ZNF813Q6ZN06 617 aa16■□□□□ 0.15
HMGN1-206ENST00000431390 CFAP77Q6ZQR2 320 aa16■□□□□ 0.15
HMGN1-206ENST00000431390 LRRC18Q8N456 261 aa16■□□□□ 0.15
HMGN1-206ENST00000431390 OR10S1Q8NGN2 331 aa16■□□□□ 0.15
HMGN1-206ENST00000431390 RNF166Q96A37 237 aaPredicted RBP16■□□□□ 0.15
HMGN1-206ENST00000431390 OR51E2Q9H255 320 aa16■□□□□ 0.15
HMGN1-206ENST00000431390 RP1L1Q8IWN7 2480 aaPredicted RBP15.99■□□□□ 0.15
HMGN1-206ENST00000431390 TRIM64BA6NI03 449 aa15.99■□□□□ 0.15
HMGN1-206ENST00000431390 SLC22A1O15245 554 aa15.99■□□□□ 0.15
HMGN1-206ENST00000431390 RPP14O95059 124 aaKnown RBP15.99■□□□□ 0.15
HMGN1-206ENST00000431390 IL2RAP01589 272 aa15.99■□□□□ 0.15
HMGN1-206ENST00000431390 H2BFMP0C1H6 154 aa15.99■□□□□ 0.15
HMGN1-206ENST00000431390 TMIGD3P0DMS9 266 aaPredicted RBP15.99■□□□□ 0.15
HMGN1-206ENST00000431390 NR4A1P22736 598 aa15.99■□□□□ 0.15
HMGN1-206ENST00000431390 PSMB10P40306 273 aa15.99■□□□□ 0.15
HMGN1-206ENST00000431390 RPS25P62851 125 aaKnown RBP15.99■□□□□ 0.15
HMGN1-206ENST00000431390 ARF1P84077 181 aaKnown RBP15.99■□□□□ 0.15
HMGN1-206ENST00000431390 CNPY1Q3B7I2 92 aa15.99■□□□□ 0.15
HMGN1-206ENST00000431390 CD200R1LQ6Q8B3 271 aa15.99■□□□□ 0.15
HMGN1-206ENST00000431390 ARL9Q6T311 187 aa15.99■□□□□ 0.15
HMGN1-206ENST00000431390 DOLPP1Q86YN1 238 aa15.99■□□□□ 0.15
HMGN1-206ENST00000431390 CNEP1R1Q8N9A8 125 aa15.99■□□□□ 0.15
HMGN1-206ENST00000431390 RPL3LQ92901 407 aaKnown RBP15.99■□□□□ 0.15
HMGN1-206ENST00000431390 FBXO17Q96EF6 278 aa15.99■□□□□ 0.15
HMGN1-206ENST00000431390 PGLYRP3Q96LB9 341 aa15.99■□□□□ 0.15
HMGN1-206ENST00000431390 COQ7Q99807 217 aa15.99■□□□□ 0.15
HMGN1-206ENST00000431390 NIPAL2Q9H841 368 aa15.99■□□□□ 0.15
HMGN1-206ENST00000431390 PNRC2Q9NPJ4 139 aaKnown RBP15.99■□□□□ 0.15
HMGN1-206ENST00000431390 PLSCR4Q9NRQ2 329 aa15.99■□□□□ 0.15
HMGN1-206ENST00000431390 CENPMQ9NSP4 180 aa15.99■□□□□ 0.15
HMGN1-206ENST00000431390 CACNA1CQ13936 2221 aa15.99■□□□□ 0.15
HMGN1-206ENST00000431390 TRBV2A0A0J9YWF9 115 aa15.98■□□□□ 0.15
HMGN1-206ENST00000431390 RER1O15258 196 aa15.98■□□□□ 0.15
HMGN1-206ENST00000431390 TNFSF13O75888 250 aa15.98■□□□□ 0.15
HMGN1-206ENST00000431390 TOXO94900 526 aa15.98■□□□□ 0.15
HMGN1-206ENST00000431390 HLA-DPB1P04440 258 aa15.98■□□□□ 0.15
HMGN1-206ENST00000431390 GALP22466 123 aa15.98■□□□□ 0.15
HMGN1-206ENST00000431390 CEACAM8P31997 349 aaPredicted RBP15.98■□□□□ 0.15
HMGN1-206ENST00000431390 CRYBB2P43320 205 aa15.98■□□□□ 0.15
HMGN1-206ENST00000431390 PCBD1P61457 104 aa15.98■□□□□ 0.15
HMGN1-206ENST00000431390 ALKBH1Q13686 389 aaKnown RBP15.98■□□□□ 0.15
HMGN1-206ENST00000431390 OR7E24Q6IFN5 339 aa15.98■□□□□ 0.15
HMGN1-206ENST00000431390 VWA1Q6PCB0 445 aa15.98■□□□□ 0.15
HMGN1-206ENST00000431390 KLHL24Q6TFL4 600 aa15.98■□□□□ 0.15
HMGN1-206ENST00000431390 SPATC1Q76KD6 591 aa15.98■□□□□ 0.15
HMGN1-206ENST00000431390 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.98■□□□□ 0.15
HMGN1-206ENST00000431390 SH3GL3Q99963 347 aa15.98■□□□□ 0.15
HMGN1-206ENST00000431390 CHCHD6Q9BRQ6 235 aa15.98■□□□□ 0.15
HMGN1-206ENST00000431390 KCNN2Q9H2S1 579 aa15.98■□□□□ 0.15
HMGN1-206ENST00000431390 DDX28Q9NUL7 540 aaKnown RBP15.98■□□□□ 0.15
HMGN1-206ENST00000431390 SSR3Q9UNL2 185 aa15.98■□□□□ 0.15
HMGN1-206ENST00000431390 ZGRF1Q86YA3 2104 aa15.98■□□□□ 0.15
HMGN1-206ENST00000431390 HIVEP3Q5T1R4 2406 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms