RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 LOXL1Q08397 574 aaPredicted RBP14.58□□□□□ -0.08
UBE3D-204ENST00000430071 NRN1LQ496H8 165 aa14.58□□□□□ -0.08
UBE3D-204ENST00000430071 OGFRL1Q5TC84 451 aaPredicted RBP14.58□□□□□ -0.08
UBE3D-204ENST00000430071 DNM1P34Q6PK57 102 aa14.58□□□□□ -0.08
UBE3D-204ENST00000430071 UGT2A3Q6UWM9 527 aa14.58□□□□□ -0.08
UBE3D-204ENST00000430071 LRP11Q86VZ4 500 aa14.58□□□□□ -0.08
UBE3D-204ENST00000430071 GLB1L2Q8IW92 636 aa14.58□□□□□ -0.08
UBE3D-204ENST00000430071 CCDC36Q8IYA8 594 aa14.58□□□□□ -0.08
UBE3D-204ENST00000430071 LRRC18Q8N456 261 aa14.58□□□□□ -0.08
UBE3D-204ENST00000430071 GALNT4Q8N4A0 578 aa14.58□□□□□ -0.08
UBE3D-204ENST00000430071 PTP4A1Q93096 173 aa14.58□□□□□ -0.08
UBE3D-204ENST00000430071 RACGAP1Q9H0H5 632 aa14.58□□□□□ -0.08
UBE3D-204ENST00000430071 TOR3AQ9H497 397 aa14.58□□□□□ -0.08
UBE3D-204ENST00000430071 ZNF442Q9H7R0 627 aa14.58□□□□□ -0.08
UBE3D-204ENST00000430071 SIAEQ9HAT2 523 aa14.58□□□□□ -0.08
UBE3D-204ENST00000430071 POLE4Q9NR33 117 aa14.58□□□□□ -0.08
UBE3D-204ENST00000430071 FZR1Q9UM11 496 aa14.58□□□□□ -0.08
UBE3D-204ENST00000430071 ORC6Q9Y5N6 252 aa14.58□□□□□ -0.08
UBE3D-204ENST00000430071 WNK2Q9Y3S1 2297 aa14.57□□□□□ -0.08
UBE3D-204ENST00000430071 ARHGAP32A7KAX9 2087 aa14.57□□□□□ -0.08
UBE3D-204ENST00000430071 SVEP1Q4LDE5 3571 aa14.57□□□□□ -0.08
UBE3D-204ENST00000430071 PRKYO43930 277 aa14.57□□□□□ -0.08
UBE3D-204ENST00000430071 SNAP29O95721 258 aa14.57□□□□□ -0.08
UBE3D-204ENST00000430071 GYPBP06028 91 aa14.57□□□□□ -0.08
UBE3D-204ENST00000430071 GAAP10253 952 aa14.57□□□□□ -0.08
UBE3D-204ENST00000430071 CCL2P13500 99 aa14.57□□□□□ -0.08
UBE3D-204ENST00000430071 LAP3P28838 519 aa14.57□□□□□ -0.08
UBE3D-204ENST00000430071 SLC25A1P53007 311 aa14.57□□□□□ -0.08
UBE3D-204ENST00000430071 DSCR9P59020 149 aa14.57□□□□□ -0.08
UBE3D-204ENST00000430071 ENDOGQ14249 297 aaKnown RBP14.57□□□□□ -0.08
UBE3D-204ENST00000430071 SNAPC1Q16533 368 aa14.57□□□□□ -0.08
UBE3D-204ENST00000430071 CARTPTQ16568 116 aa14.57□□□□□ -0.08
UBE3D-204ENST00000430071 FAM27BQ5VT28 67 aa14.57□□□□□ -0.08
UBE3D-204ENST00000430071 PAQR4Q8N4S7 273 aaPredicted RBP14.57□□□□□ -0.08
UBE3D-204ENST00000430071 OR51L1Q8NGJ5 315 aa14.57□□□□□ -0.08
UBE3D-204ENST00000430071 MRPL37Q9BZE1 423 aaKnown RBP14.57□□□□□ -0.08
UBE3D-204ENST00000430071 EMC7Q9NPA0 242 aa14.57□□□□□ -0.08
UBE3D-204ENST00000430071 HINT3Q9NQE9 182 aaKnown RBP14.57□□□□□ -0.08
UBE3D-204ENST00000430071 MYEF2Q9P2K5 600 aaKnown RBP14.57□□□□□ -0.08
UBE3D-204ENST00000430071 RRP15Q9Y3B9 282 aaKnown RBP14.57□□□□□ -0.08
UBE3D-204ENST00000430071 LYNX1G3V0Z9 82 aa14.56□□□□□ -0.08
UBE3D-204ENST00000430071 FARS2O95363 451 aaKnown RBP14.56□□□□□ -0.08
UBE3D-204ENST00000430071 IGHV4-31P0DP07 118 aa14.56□□□□□ -0.08
UBE3D-204ENST00000430071 LYNX1P0DP58 116 aa14.56□□□□□ -0.08
UBE3D-204ENST00000430071 BMP4P12644 408 aa14.56□□□□□ -0.08
UBE3D-204ENST00000430071 SLC25A16P16260 332 aa14.56□□□□□ -0.08
UBE3D-204ENST00000430071 SPI1P17947 270 aa14.56□□□□□ -0.08
UBE3D-204ENST00000430071 MSR1P21757 451 aa14.56□□□□□ -0.08
UBE3D-204ENST00000430071 CENPAP49450 140 aa14.56□□□□□ -0.08
UBE3D-204ENST00000430071 EFNB1P98172 346 aa14.56□□□□□ -0.08
UBE3D-204ENST00000430071 MEP1BQ16820 701 aa14.56□□□□□ -0.08
UBE3D-204ENST00000430071 PLBD1Q6P4A8 553 aa14.56□□□□□ -0.08
UBE3D-204ENST00000430071 LYPD4Q6UWN0 246 aa14.56□□□□□ -0.08
UBE3D-204ENST00000430071 CPOQ8IVL8 374 aa14.56□□□□□ -0.08
UBE3D-204ENST00000430071 SLC26A10Q8NG04 563 aa14.56□□□□□ -0.08
UBE3D-204ENST00000430071 OR2T4Q8NH00 348 aa14.56□□□□□ -0.08
UBE3D-204ENST00000430071 NRG4Q8WWG1 115 aa14.56□□□□□ -0.08
UBE3D-204ENST00000430071 C11orf40Q8WZ69 217 aa14.56□□□□□ -0.08
UBE3D-204ENST00000430071 OTULINQ96BN8 352 aa14.56□□□□□ -0.08
UBE3D-204ENST00000430071 PLEKHA8Q96JA3 519 aa14.56□□□□□ -0.08
UBE3D-204ENST00000430071 TEX12Q9BXU0 123 aa14.56□□□□□ -0.08
UBE3D-204ENST00000430071 TPK1Q9H3S4 243 aa14.56□□□□□ -0.08
UBE3D-204ENST00000430071 IGHV4-61A0A0C4DH41 118 aa14.55□□□□□ -0.08
UBE3D-204ENST00000430071 PRR23D1E9PI22 279 aaPredicted RBP14.55□□□□□ -0.08
UBE3D-204ENST00000430071 TFP02787 698 aa14.55□□□□□ -0.08
UBE3D-204ENST00000430071 MMP7P09237 267 aaPredicted RBP14.55□□□□□ -0.08
UBE3D-204ENST00000430071 PRR23D2P0DMB1 279 aaPredicted RBP14.55□□□□□ -0.08
UBE3D-204ENST00000430071 GUCA1AP43080 201 aaPredicted RBP14.55□□□□□ -0.08
UBE3D-204ENST00000430071 PPOXP50336 477 aa14.55□□□□□ -0.08
UBE3D-204ENST00000430071 PDLIM4P50479 330 aa14.55□□□□□ -0.08
UBE3D-204ENST00000430071 RIPK1Q13546 671 aa14.55□□□□□ -0.08
UBE3D-204ENST00000430071 GGTLC2Q14390 218 aa14.55□□□□□ -0.08
UBE3D-204ENST00000430071 KCNMB1Q16558 191 aa14.55□□□□□ -0.08
UBE3D-204ENST00000430071 C6orf52Q5T4I8 152 aa14.55□□□□□ -0.08
UBE3D-204ENST00000430071 SLC16A14Q7RTX9 510 aa14.55□□□□□ -0.08
UBE3D-204ENST00000430071 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.55□□□□□ -0.08
UBE3D-204ENST00000430071 PACRGLQ8N7B6 248 aa14.55□□□□□ -0.08
UBE3D-204ENST00000430071 PROKR2Q8NFJ6 384 aa14.55□□□□□ -0.08
UBE3D-204ENST00000430071 BBS1Q8NFJ9 593 aa14.55□□□□□ -0.08
UBE3D-204ENST00000430071 SYT3Q9BQG1 590 aa14.55□□□□□ -0.08
UBE3D-204ENST00000430071 SOX7Q9BT81 388 aa14.55□□□□□ -0.08
UBE3D-204ENST00000430071 ZNF416Q9BWM5 594 aa14.55□□□□□ -0.08
UBE3D-204ENST00000430071 MOV10Q9HCE1 1003 aaKnown RBP14.55□□□□□ -0.08
UBE3D-204ENST00000430071 MRPL22Q9NWU5 206 aaKnown RBP14.55□□□□□ -0.08
UBE3D-204ENST00000430071 TLX2O43763 284 aaPredicted RBP14.54□□□□□ -0.08
UBE3D-204ENST00000430071 UBL3O95164 117 aa14.54□□□□□ -0.08
UBE3D-204ENST00000430071 ATP6V1G2O95670 118 aa14.54□□□□□ -0.08
UBE3D-204ENST00000430071 RAB36O95755 333 aa14.54□□□□□ -0.08
UBE3D-204ENST00000430071 ADRA2AP08913 450 aa14.54□□□□□ -0.08
UBE3D-204ENST00000430071 CST2P09228 141 aa14.54□□□□□ -0.08
UBE3D-204ENST00000430071 ZNF16P17020 682 aaPredicted RBP14.54□□□□□ -0.08
UBE3D-204ENST00000430071 PAICSP22234 425 aaKnown RBP14.54□□□□□ -0.08
UBE3D-204ENST00000430071 USF1P22415 310 aaPredicted RBP14.54□□□□□ -0.08
UBE3D-204ENST00000430071 GGT2P36268 569 aa14.54□□□□□ -0.08
UBE3D-204ENST00000430071 NR4A2P43354 598 aa14.54□□□□□ -0.08
UBE3D-204ENST00000430071 HSF2Q03933 536 aa14.54□□□□□ -0.08
UBE3D-204ENST00000430071 GLO1Q04760 184 aa14.54□□□□□ -0.08
UBE3D-204ENST00000430071 MAD2L1BPQ15013 274 aaPredicted RBP14.54□□□□□ -0.08
UBE3D-204ENST00000430071 LINC01590Q5TEZ4 76 aa14.54□□□□□ -0.08
UBE3D-204ENST00000430071 CXXC5Q7LFL8 322 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms