RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 NDUFB2O95178 105 aa6.91□□□□□ -1.3
SYNPO2-202ENST00000429713 PPP1CBP62140 327 aa6.91□□□□□ -1.3
SYNPO2-202ENST00000429713 LTBQ06643 244 aa6.91□□□□□ -1.3
SYNPO2-202ENST00000429713 BTLAQ7Z6A9 289 aa6.91□□□□□ -1.3
SYNPO2-202ENST00000429713 OR51T1Q8NGJ9 327 aa6.91□□□□□ -1.3
SYNPO2-202ENST00000429713 TINAGL1Q9GZM7 467 aaPredicted RBP6.91□□□□□ -1.3
SYNPO2-202ENST00000429713 ZNF230Q9UIE0 474 aaPredicted RBP6.91□□□□□ -1.3
SYNPO2-202ENST00000429713 WASF3Q9UPY6 502 aa6.91□□□□□ -1.3
SYNPO2-202ENST00000429713 SIRPB1O00241 398 aa6.91□□□□□ -1.3
SYNPO2-202ENST00000429713 MMP2P08253 660 aa6.91□□□□□ -1.3
SYNPO2-202ENST00000429713 PRR35P0CG20 571 aa6.91□□□□□ -1.3
SYNPO2-202ENST00000429713 SRMP19623 302 aa6.91□□□□□ -1.3
SYNPO2-202ENST00000429713 FAM3AP98173 230 aa6.91□□□□□ -1.3
SYNPO2-202ENST00000429713 ACY1Q03154 408 aa6.91□□□□□ -1.3
SYNPO2-202ENST00000429713 PDE7AQ13946 482 aa6.91□□□□□ -1.3
SYNPO2-202ENST00000429713 TMEM64Q6YI46 380 aa6.91□□□□□ -1.3
SYNPO2-202ENST00000429713 CMTM8Q8IZV2 173 aa6.91□□□□□ -1.3
SYNPO2-202ENST00000429713 PNKDQ8N490 385 aa6.91□□□□□ -1.3
SYNPO2-202ENST00000429713 POFUT1Q9H488 388 aa6.91□□□□□ -1.3
SYNPO2-202ENST00000429713 MANBALQ9NQG1 85 aa6.91□□□□□ -1.3
SYNPO2-202ENST00000429713 ACACAQ13085 2346 aa6.91□□□□□ -1.3
SYNPO2-202ENST00000429713 M0R1X1 148 aa6.91□□□□□ -1.3
SYNPO2-202ENST00000429713 FZD9O00144 591 aa6.91□□□□□ -1.3
SYNPO2-202ENST00000429713 GFRA2O00451 464 aa6.91□□□□□ -1.3
SYNPO2-202ENST00000429713 NDUFS6O75380 124 aaKnown RBP6.91□□□□□ -1.3
SYNPO2-202ENST00000429713 SERPINE2P07093 398 aa6.91□□□□□ -1.3
SYNPO2-202ENST00000429713 MELTFP08582 738 aa6.91□□□□□ -1.3
SYNPO2-202ENST00000429713 EPHA2P29317 976 aa6.91□□□□□ -1.3
SYNPO2-202ENST00000429713 RPS25P62851 125 aaKnown RBP6.91□□□□□ -1.3
SYNPO2-202ENST00000429713 PSRC1Q6PGN9 363 aaPredicted RBP6.91□□□□□ -1.3
SYNPO2-202ENST00000429713 STXBP6Q8NFX7 210 aa6.91□□□□□ -1.3
SYNPO2-202ENST00000429713 ASB11Q8WXH4 323 aa6.91□□□□□ -1.3
SYNPO2-202ENST00000429713 MS4A3Q96HJ5 214 aa6.91□□□□□ -1.3
SYNPO2-202ENST00000429713 NMNAT2Q9BZQ4 307 aa6.91□□□□□ -1.3
SYNPO2-202ENST00000429713 OR51B6Q9H340 312 aa6.91□□□□□ -1.3
SYNPO2-202ENST00000429713 FAM206AQ9NX38 181 aa6.91□□□□□ -1.3
SYNPO2-202ENST00000429713 HHLA2Q9UM44 414 aa6.91□□□□□ -1.3
SYNPO2-202ENST00000429713 A0A1B0GVT2 93 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 TSPAN6O43657 245 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 GLCEO94923 617 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 PDGFBP01127 241 aaPredicted RBP6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 DBIP07108 87 aaKnown RBP6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 LIMS3P0CW19 117 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 LIMS4P0CW20 117 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 KIAA0895LQ68EN5 471 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 C22orf39Q6P5X5 142 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 CDIPTO14735 213 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 ADAP1O75689 374 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 CBR3O75828 277 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 GSTP1P09211 210 aaKnown RBP6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 CLEC2LP0C7M8 214 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 C8orf89P0DMQ9 161 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 TNFSF4P23510 183 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 SP3Q02447 781 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 KHDC3LQ587J8 217 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 TXNDC8Q6A555 127 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 SFRP4Q6FHJ7 346 aaPredicted RBP6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 SLC16A13Q7RTY0 426 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 NUP43Q8NFH3 380 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 KCND3Q9UK17 655 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 F6UZH7 168 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 RTCAO00442 366 aaKnown RBP6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 LEFTY1O75610 366 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 HOXB9P17482 250 aaPredicted RBP6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 CEBPBP17676 345 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 SPINT3P49223 89 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 PCBP4P57723 403 aaKnown RBP6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 LCTLQ6UWM7 567 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 OR5M1Q8NGP8 315 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 OR14C36Q8NHC7 312 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 LINC01599Q8WXQ3 324 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 SLC46A1Q96NT5 459 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 KCNK12Q9HB15 430 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 NUTF2P61970 127 aaKnown RBP6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 HSF1Q00613 529 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 ODF4Q2M2E3 257 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 LRRC37A5PQ49AS3 106 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 EMC4Q5J8M3 183 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 RGMBQ6NW40 437 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 TCTN2Q96GX1 697 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 OR52D1Q9H346 318 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 PPP1R3EQ9H7J1 279 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 FKBP11Q9NYL4 201 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 PRODH2Q9UF12 536 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 WIPI2Q9Y4P8 454 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 DENND4CQ5VZ89 1909 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 TNS1Q9HBL0 1735 aaKnown RBP6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 TBXA2RP21731 343 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 AWAT1Q58HT5 328 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 PHYHD1Q5SRE7 291 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 RPUSD3Q6P087 351 aaKnown RBP6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 CASTOR1Q8WTX7 329 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 HOXB13Q92826 284 aaPredicted RBP6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 LMF1Q96S06 567 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 COL25A1Q9BXS0 654 aaPredicted RBP6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 ZNF286AQ9HBT8 521 aa6.9□□□□□ -1.3
SYNPO2-202ENST00000429713 FEZF1A0PJY2 475 aa6.9□□□□□ -1.31
SYNPO2-202ENST00000429713 PTGESO14684 152 aa6.9□□□□□ -1.31
SYNPO2-202ENST00000429713 SMAD9O15198 467 aaKnown RBP6.9□□□□□ -1.31
SYNPO2-202ENST00000429713 ELAVL4P26378 380 aaKnown RBP6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms