RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 ELSPBP1Q96BH3 223 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 ZNF775Q96BV0 537 aaPredicted RBP11.22□□□□□ -0.61
CDH3-202ENST00000429102 DPYSL5Q9BPU6 564 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 ST6GALNAC5Q9BVH7 336 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 VSX1Q9NZR4 365 aaPredicted RBP11.22□□□□□ -0.61
CDH3-202ENST00000429102 KLK13Q9UKR3 277 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 HIF3AQ9Y2N7 669 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 CPED1A4D0V7 1026 aa11.21□□□□□ -0.61
CDH3-202ENST00000429102 ABHD16AO95870 558 aa11.21□□□□□ -0.61
CDH3-202ENST00000429102 KNG1P01042 644 aa11.21□□□□□ -0.61
CDH3-202ENST00000429102 HOXB5P09067 269 aa11.21□□□□□ -0.61
CDH3-202ENST00000429102 INSM1Q01101 510 aaPredicted RBP11.21□□□□□ -0.61
CDH3-202ENST00000429102 POU3F1Q03052 451 aaPredicted RBP11.21□□□□□ -0.61
CDH3-202ENST00000429102 GGTLC2Q14390 218 aa11.21□□□□□ -0.61
CDH3-202ENST00000429102 LINC00114Q6XXX2 140 aa11.21□□□□□ -0.61
CDH3-202ENST00000429102 ASB5Q8WWX0 329 aa11.21□□□□□ -0.61
CDH3-202ENST00000429102 ARL5BQ96KC2 179 aa11.21□□□□□ -0.61
CDH3-202ENST00000429102 DUSP15Q9H1R2 295 aaPredicted RBP11.21□□□□□ -0.61
CDH3-202ENST00000429102 C12orf10Q9HB07 376 aa11.21□□□□□ -0.61
CDH3-202ENST00000429102 EDARQ9UNE0 448 aa11.21□□□□□ -0.61
CDH3-202ENST00000429102 VSIG4Q9Y279 399 aa11.21□□□□□ -0.61
CDH3-202ENST00000429102 AUP1Q9Y679 476 aa11.21□□□□□ -0.61
CDH3-202ENST00000429102 FANCMQ8IYD8 2048 aa11.21□□□□□ -0.61
CDH3-202ENST00000429102 TNFSF14O43557 240 aa11.21□□□□□ -0.61
CDH3-202ENST00000429102 SFTPBP07988 381 aa11.21□□□□□ -0.61
CDH3-202ENST00000429102 GP1BBP13224 206 aa11.21□□□□□ -0.61
CDH3-202ENST00000429102 LY6G6FQ5SQ64 297 aa11.21□□□□□ -0.61
CDH3-202ENST00000429102 CLVS2Q5SYC1 327 aa11.21□□□□□ -0.61
CDH3-202ENST00000429102 ASPHD2Q6ICH7 369 aa11.21□□□□□ -0.61
CDH3-202ENST00000429102 PAPD4Q6PIY7 484 aaKnown RBP11.21□□□□□ -0.61
CDH3-202ENST00000429102 BATF2Q8N1L9 274 aa11.21□□□□□ -0.61
CDH3-202ENST00000429102 GTPBP8Q8N3Z3 284 aaPredicted RBP11.21□□□□□ -0.61
CDH3-202ENST00000429102 OR52N4Q8NGI2 321 aa11.21□□□□□ -0.61
CDH3-202ENST00000429102 MRPL22Q9NWU5 206 aaKnown RBP11.21□□□□□ -0.61
CDH3-202ENST00000429102 TAS2R8Q9NYW2 309 aa11.21□□□□□ -0.61
CDH3-202ENST00000429102 TMEM200CA6NKL6 621 aa11.21□□□□□ -0.62
CDH3-202ENST00000429102 TO15178 435 aa11.21□□□□□ -0.62
CDH3-202ENST00000429102 MRPS10P82664 201 aaKnown RBP11.21□□□□□ -0.62
CDH3-202ENST00000429102 RASGEF1BQ0VAM2 473 aa11.21□□□□□ -0.62
CDH3-202ENST00000429102 ZNF141Q15928 474 aa11.21□□□□□ -0.62
CDH3-202ENST00000429102 ESX1Q8N693 406 aa11.21□□□□□ -0.62
CDH3-202ENST00000429102 FBXO17Q96EF6 278 aa11.21□□□□□ -0.62
CDH3-202ENST00000429102 NICN1Q9BSH3 213 aa11.21□□□□□ -0.62
CDH3-202ENST00000429102 NKX6-2Q9C056 277 aaPredicted RBP11.21□□□□□ -0.62
CDH3-202ENST00000429102 UPB1Q9UBR1 384 aa11.21□□□□□ -0.62
CDH3-202ENST00000429102 ETV7Q9Y603 341 aa11.21□□□□□ -0.62
CDH3-202ENST00000429102 EPOPA6NHQ4 379 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 MPTX1A8MV57 137 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 TMEM150CB9EJG8 249 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 SLC33A1O00400 549 aaPredicted RBP11.2□□□□□ -0.62
CDH3-202ENST00000429102 SLC17A2O00624 439 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 ZNF254O75437 659 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 H2BFMP0C1H6 154 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 PNMTP11086 282 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 NFYBP25208 207 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 CDAP32320 146 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 CD96P40200 585 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 ACTBP60709 375 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 ACTG1P63261 375 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 ARFRP1Q13795 201 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 CCINQ13939 588 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 ZNF615Q8N8J6 731 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 ZNF248Q8NDW4 579 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 OR8B4Q96RC9 309 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 METTL8Q9H825 291 aaKnown RBP11.2□□□□□ -0.62
CDH3-202ENST00000429102 TMEM14AQ9Y6G1 99 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 IGKV1D-43A0A0B4J1Z2 117 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 A6NCN8 305 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 RFPL4AA6NLU0 287 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 OR6C76A6NM76 312 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 RFPL4AL1F8VTS6 287 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 ZNF208O43345 1280 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 STK17BO94768 372 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 ABOP16442 354 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 NAGAP17050 411 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 ID4P47928 161 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 ZNF684Q5T5D7 378 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 AWAT2Q6E213 333 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 LANCL3Q6ZV70 420 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 ZNF679Q8IYX0 411 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 LMF2Q9BU23 707 aaKnown RBP11.2□□□□□ -0.62
CDH3-202ENST00000429102 CNTD2Q9H8S5 307 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 GPN3Q9UHW5 284 aaPredicted RBP11.2□□□□□ -0.62
CDH3-202ENST00000429102 CSAG2Q9Y5P2 127 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 A0A1W2PPC1 479 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 PRSS37A4D1T9 235 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 A8MXK9 166 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 B3GALNT1O75752 331 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 SCGB1D2O95969 90 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 SERPINF1P36955 418 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 AIMP2Q13155 320 aaKnown RBP11.2□□□□□ -0.62
CDH3-202ENST00000429102 SKP2Q13309 424 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 PRTGQ2VWP7 1150 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 MANEAQ5SRI9 462 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 EEF1A1P5Q5VTE0 462 aa11.2□□□□□ -0.62
CDH3-202ENST00000429102 HPP00738 406 aa11.19□□□□□ -0.62
CDH3-202ENST00000429102 FGF2P09038 288 aa11.19□□□□□ -0.62
CDH3-202ENST00000429102 ASAH2BP0C7U1 165 aa11.19□□□□□ -0.62
CDH3-202ENST00000429102 CAPZA2P47755 286 aa11.19□□□□□ -0.62
CDH3-202ENST00000429102 SNTB1Q13884 538 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms