RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 J3QRE1 110 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 IL18BPO95998 194 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 ITGA5P08648 1049 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 CELA3BP08861 270 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 GAAP10253 952 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 FAM27E3Q08E93 113 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 STK11Q15831 433 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 BCL2A1Q16548 175 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 PDSS1Q5T2R2 415 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 SLC25A47Q6Q0C1 308 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 SKA3Q8IX90 412 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 SLC35F2Q8IXU6 374 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 C20orf196Q8IYI0 205 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 POC5Q8NA72 575 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 OR2T4Q8NH00 348 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 OR6S1Q8NH40 331 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 NABP1Q96AH0 204 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 APH1AQ96BI3 265 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 RBP7Q96R05 134 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 TEX12Q9BXU0 123 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 ERVK13-1Q9NX77 482 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 SLCO1C1Q9NYB5 712 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 ZNF224Q9NZL3 707 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 KLHL21Q9UJP4 597 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 GNG8Q9UK08 70 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 NKX2-6A6NCS4 301 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 TMEM8BA6NDV4 472 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 DHHO43323 396 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 GPX5O75715 221 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 C1QL1O75973 258 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 PNPP00491 289 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 RNF224P0DH78 156 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 APEHP13798 732 aaKnown RBP8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 SOX6P35712 828 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 LIPKQ5VXJ0 399 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 ZNF474Q6S9Z5 364 aaPredicted RBP8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 GDPGP1Q6ZNW5 385 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 FAM214BQ7L5A3 538 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 GPR137CQ8N3F9 429 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 OR52N5Q8NH56 324 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 TRMT61AQ96FX7 289 aaKnown RBP8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 TMEM80Q96HE8 168 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 CNN2Q99439 309 aaKnown RBP8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 SDHCQ99643 169 aaPredicted RBP8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 TM9SF2Q99805 663 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 ALG8Q9BVK2 526 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 SLCO5A1Q9H2Y9 848 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 BCO1Q9HAY6 547 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 FANCFQ9NPI8 374 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 UPB1Q9UBR1 384 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 TUBD1Q9UJT1 453 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 IKZF2Q9UKS7 526 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 POLR1DQ9Y2S0 133 aa8.35□□□□□ -1.07
HMGCLL1-206ENST00000428842 LOC110117498-PIK3R3F6TDL0 507 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 PRRG2O14669 202 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 FZD7O75084 574 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 VAMP5O95183 116 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 SPNP16150 400 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 CCNOP22674 350 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 IGHV1-2P23083 117 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 PRKXP51817 358 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 NANOS3P60323 173 aaKnown RBP8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 HGFACQ04756 655 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 GLO1Q04760 184 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 MFGE8Q08431 387 aaPredicted RBP8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 EIF2B1Q14232 305 aaKnown RBP8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 GFOD2Q3B7J2 385 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 FAM27D1Q5T7N8 215 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 NSUN5P2Q63ZY6 315 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 ZNF774Q6NX45 483 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 ADPRHL1Q8NDY3 354 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 OR10AC1Q8NH08 325 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 TMEM54Q969K7 222 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 RNF166Q96A37 237 aaPredicted RBP8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 ZC3HAV1LQ96H79 300 aaKnown RBP8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 ADAD1Q96M93 576 aaKnown RBP8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 INTS14Q96SY0 518 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 PDCD1LG2Q9BQ51 273 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 ABHD6Q9BV23 337 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 NELFAQ9H3P2 528 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 SIAEQ9HAT2 523 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 ITGB1BP2Q9UKP3 347 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 BAIAP2Q9UQB8 552 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 PTPN13Q12923 2485 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 IGKV3D-15A0A087WSY6 115 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 SLC22A31A6NKX4 558 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 LINC01387J3KSC0 135 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 CCL21O00585 134 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 IDH3BO43837 385 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 SLC43A1O75387 559 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 RAB36O95755 333 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 TMIGD3P0DMS9 266 aaPredicted RBP8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 FKBP2P26885 142 aaKnown RBP8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 HSF2Q03933 536 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 ENDOGQ14249 297 aaKnown RBP8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 POU4F3Q15319 338 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 KRTCAP3Q53RY4 240 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 C1orf185Q5T7R7 199 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 TFAP2EQ6VUC0 442 aa8.34□□□□□ -1.07
HMGCLL1-206ENST00000428842 ZNF813Q6ZN06 617 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms