RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 KCNK15Q9H427 330 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 AUNIPQ9H7T9 357 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 GLTPQ9NZD2 209 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 PCDHGA1Q9Y5H4 931 aa9.23□□□□□ -0.93
HDAC9-210ENST00000428307 PHF3Q92576 2039 aaKnown RBP9.23□□□□□ -0.93
HDAC9-210ENST00000428307 LOC400499M0QZD8 3231 aa9.22□□□□□ -0.93
HDAC9-210ENST00000428307 DCDC2BA2VCK2 349 aa9.22□□□□□ -0.93
HDAC9-210ENST00000428307 STMND1H3BQB6 276 aa9.22□□□□□ -0.93
HDAC9-210ENST00000428307 TERTO14746 1132 aaKnown RBP9.22□□□□□ -0.93
HDAC9-210ENST00000428307 FAM157BP0CG42 384 aa9.22□□□□□ -0.93
HDAC9-210ENST00000428307 CALCBP10092 127 aa9.22□□□□□ -0.93
HDAC9-210ENST00000428307 DDOSTP39656 456 aa9.22□□□□□ -0.93
HDAC9-210ENST00000428307 CSNK1A1P48729 337 aa9.22□□□□□ -0.93
HDAC9-210ENST00000428307 MMP16P51512 607 aa9.22□□□□□ -0.93
HDAC9-210ENST00000428307 NKX2-5P52952 324 aaPredicted RBP9.22□□□□□ -0.93
HDAC9-210ENST00000428307 ART1P52961 327 aa9.22□□□□□ -0.93
HDAC9-210ENST00000428307 CARD18P57730 90 aa9.22□□□□□ -0.93
HDAC9-210ENST00000428307 GABREP78334 506 aa9.22□□□□□ -0.93
HDAC9-210ENST00000428307 TAF13Q15543 124 aa9.22□□□□□ -0.93
HDAC9-210ENST00000428307 TGIF1Q15583 401 aa9.22□□□□□ -0.93
HDAC9-210ENST00000428307 SIAH3Q8IW03 269 aa9.22□□□□□ -0.93
HDAC9-210ENST00000428307 DEFB124Q8NES8 71 aa9.22□□□□□ -0.93
HDAC9-210ENST00000428307 ROBO4Q8WZ75 1007 aa9.22□□□□□ -0.93
HDAC9-210ENST00000428307 NAA11Q9BSU3 229 aaPredicted RBP9.22□□□□□ -0.93
HDAC9-210ENST00000428307 RBM24Q9BX46 236 aaKnown RBP9.22□□□□□ -0.93
HDAC9-210ENST00000428307 FAM206AQ9NX38 181 aa9.22□□□□□ -0.93
HDAC9-210ENST00000428307 MRPL15Q9P015 296 aaKnown RBP9.22□□□□□ -0.93
HDAC9-210ENST00000428307 CKLFQ9UBR5 152 aa9.22□□□□□ -0.93
HDAC9-210ENST00000428307 STEAP1Q9UHE8 339 aa9.22□□□□□ -0.93
HDAC9-210ENST00000428307 CNOT1A5YKK6 2376 aaKnown RBP9.22□□□□□ -0.93
HDAC9-210ENST00000428307 RTTNQ86VV8 2226 aa9.22□□□□□ -0.93
HDAC9-210ENST00000428307 URB1O60287 2271 aaKnown RBP9.22□□□□□ -0.93
HDAC9-210ENST00000428307 GJE1A6NN92 205 aa9.22□□□□□ -0.93
HDAC9-210ENST00000428307 SMAD9O15198 467 aaKnown RBP9.22□□□□□ -0.93
HDAC9-210ENST00000428307 CXCL13O43927 109 aa9.22□□□□□ -0.93
HDAC9-210ENST00000428307 NEURL1O76050 574 aa9.22□□□□□ -0.93
HDAC9-210ENST00000428307 VAMP5O95183 116 aa9.22□□□□□ -0.93
HDAC9-210ENST00000428307 SDHBP21912 280 aa9.22□□□□□ -0.93
HDAC9-210ENST00000428307 CDK2P24941 298 aa9.22□□□□□ -0.93
HDAC9-210ENST00000428307 HSD11B1P28845 292 aa9.22□□□□□ -0.93
HDAC9-210ENST00000428307 GUCA1AP43080 201 aaPredicted RBP9.22□□□□□ -0.93
HDAC9-210ENST00000428307 NR4A2P43354 598 aa9.22□□□□□ -0.93
HDAC9-210ENST00000428307 SUCLG1P53597 346 aaKnown RBP9.22□□□□□ -0.93
HDAC9-210ENST00000428307 RAC3P60763 192 aa9.22□□□□□ -0.93
HDAC9-210ENST00000428307 GALK2Q01415 458 aa9.22□□□□□ -0.93
HDAC9-210ENST00000428307 SPOCK1Q08629 439 aa9.22□□□□□ -0.93
HDAC9-210ENST00000428307 TATDN3Q17R31 274 aa9.22□□□□□ -0.93
HDAC9-210ENST00000428307 ATP1A1-AS1Q5TC04 95 aa9.22□□□□□ -0.93
HDAC9-210ENST00000428307 ZNF704Q6ZNC4 412 aaPredicted RBP9.22□□□□□ -0.93
HDAC9-210ENST00000428307 LRRC18Q8N456 261 aa9.22□□□□□ -0.93
HDAC9-210ENST00000428307 ZIC4Q8N9L1 334 aa9.22□□□□□ -0.93
HDAC9-210ENST00000428307 OR2M2Q96R28 347 aa9.22□□□□□ -0.93
HDAC9-210ENST00000428307 ZFP64Q9NPA5 681 aa9.22□□□□□ -0.93
HDAC9-210ENST00000428307 DDX28Q9NUL7 540 aaKnown RBP9.22□□□□□ -0.93
HDAC9-210ENST00000428307 POU2F3Q9UKI9 436 aa9.22□□□□□ -0.93
HDAC9-210ENST00000428307 CACNG2Q9Y698 323 aa9.22□□□□□ -0.93
HDAC9-210ENST00000428307 SPAARA0A1B0GVQ0 90 aa9.21□□□□□ -0.93
HDAC9-210ENST00000428307 A6NL46 340 aa9.21□□□□□ -0.93
HDAC9-210ENST00000428307 TTRP02766 147 aa9.21□□□□□ -0.93
HDAC9-210ENST00000428307 ACSM4P0C7M7 580 aa9.21□□□□□ -0.93
HDAC9-210ENST00000428307 CNR1P21554 472 aa9.21□□□□□ -0.93
HDAC9-210ENST00000428307 SLC6A1P30531 599 aa9.21□□□□□ -0.93
HDAC9-210ENST00000428307 EFNB2P52799 333 aa9.21□□□□□ -0.93
HDAC9-210ENST00000428307 FOXO1Q12778 655 aa9.21□□□□□ -0.93
HDAC9-210ENST00000428307 TMEM69Q5SWH9 247 aa9.21□□□□□ -0.93
HDAC9-210ENST00000428307 TMEM244Q5VVB8 128 aa9.21□□□□□ -0.93
HDAC9-210ENST00000428307 GGNQ86UU5 652 aa9.21□□□□□ -0.93
HDAC9-210ENST00000428307 THRSPQ92748 146 aa9.21□□□□□ -0.93
HDAC9-210ENST00000428307 FGGYQ96C11 551 aa9.21□□□□□ -0.93
HDAC9-210ENST00000428307 ITPKCQ96DU7 683 aa9.21□□□□□ -0.93
HDAC9-210ENST00000428307 ZNF837Q96EG3 531 aaPredicted RBP9.21□□□□□ -0.93
HDAC9-210ENST00000428307 ZC3HAV1LQ96H79 300 aaKnown RBP9.21□□□□□ -0.93
HDAC9-210ENST00000428307 CMTM3Q96MX0 182 aa9.21□□□□□ -0.93
HDAC9-210ENST00000428307 GAL3ST1Q99999 423 aa9.21□□□□□ -0.93
HDAC9-210ENST00000428307 UTP23Q9BRU9 249 aaKnown RBP9.21□□□□□ -0.93
HDAC9-210ENST00000428307 ZNF416Q9BWM5 594 aa9.21□□□□□ -0.93
HDAC9-210ENST00000428307 PBOV1Q9GZY1 135 aa9.21□□□□□ -0.93
HDAC9-210ENST00000428307 MYEF2Q9P2K5 600 aaKnown RBP9.21□□□□□ -0.93
HDAC9-210ENST00000428307 KLK11Q9UBX7 282 aa9.21□□□□□ -0.93
HDAC9-210ENST00000428307 CGGBP1Q9UFW8 167 aaPredicted RBP9.21□□□□□ -0.93
HDAC9-210ENST00000428307 NUFIP1Q9UHK0 495 aaKnown RBP9.21□□□□□ -0.93
HDAC9-210ENST00000428307 FOXJ3Q9UPW0 622 aa9.21□□□□□ -0.93
HDAC9-210ENST00000428307 ORC5O43913 435 aa9.21□□□□□ -0.94
HDAC9-210ENST00000428307 ISG15P05161 165 aa9.21□□□□□ -0.94
HDAC9-210ENST00000428307 ANOS1P23352 680 aa9.21□□□□□ -0.94
HDAC9-210ENST00000428307 NTF4P34130 210 aa9.21□□□□□ -0.94
HDAC9-210ENST00000428307 GNALP38405 381 aa9.21□□□□□ -0.94
HDAC9-210ENST00000428307 PTH2RP49190 550 aa9.21□□□□□ -0.94
HDAC9-210ENST00000428307 POU3F4P49335 361 aa9.21□□□□□ -0.94
HDAC9-210ENST00000428307 CLDN15P56746 228 aa9.21□□□□□ -0.94
HDAC9-210ENST00000428307 C2orf76Q3KRA6 126 aa9.21□□□□□ -0.94
HDAC9-210ENST00000428307 GLYATL3Q5SZD4 288 aa9.21□□□□□ -0.94
HDAC9-210ENST00000428307 JAGN1Q8N5M9 183 aa9.21□□□□□ -0.94
HDAC9-210ENST00000428307 OR52I2Q8NH67 350 aa9.21□□□□□ -0.94
HDAC9-210ENST00000428307 OR10D3Q8NH80 312 aa9.21□□□□□ -0.94
HDAC9-210ENST00000428307 ADAMTS17Q8TE56 1095 aa9.21□□□□□ -0.94
HDAC9-210ENST00000428307 SMIM4Q8WVI0 70 aa9.21□□□□□ -0.94
HDAC9-210ENST00000428307 NKD1Q969G9 470 aa9.21□□□□□ -0.94
HDAC9-210ENST00000428307 FAM3DQ96BQ1 224 aa9.21□□□□□ -0.94
HDAC9-210ENST00000428307 HAVCR1Q96D42 359 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms