RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 OLIG3Q7RTU3 272 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 CD163Q86VB7 1156 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 LRRTM4Q86VH4 590 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 PIGQQ9BRB3 760 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 CERS4Q9HA82 394 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 STEAP1Q9UHE8 339 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 MRM2Q9UI43 246 aaKnown RBP4.63□□□□□ -1.67
RIF1-203ENST00000428287 TBC1D3DA0A087WVF3 549 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 TBC1D3IA0A087WXS9 549 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 TRBV23-1A0A0A0MS06 115 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 CPSF4LA6NMK7 179 aaKnown RBP4.62□□□□□ -1.67
RIF1-203ENST00000428287 TBC1D3LB9A6J9 549 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 LRP3O75074 770 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 ISG15P05161 165 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 GYPBP06028 91 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 TBC1D3HP0C7X1 549 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 SMIM10L1P0DMW3 83 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 RPS23P62266 143 aaKnown RBP4.62□□□□□ -1.67
RIF1-203ENST00000428287 RNASE10Q5GAN6 216 aaKnown RBP4.62□□□□□ -1.67
RIF1-203ENST00000428287 HIST2H3PS2Q5TEC6 136 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 TBC1D3CQ6IPX1 549 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 TMEM184AQ6ZMB5 413 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 TBC1D3Q8IZP1 549 aaPredicted RBP4.62□□□□□ -1.67
RIF1-203ENST00000428287 ZNF433Q8N7K0 673 aaPredicted RBP4.62□□□□□ -1.67
RIF1-203ENST00000428287 SNIP1Q8TAD8 396 aaKnown RBP4.62□□□□□ -1.67
RIF1-203ENST00000428287 ASB5Q8WWX0 329 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 OIT3Q8WWZ8 545 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 FAM3DQ96BQ1 224 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 ZMYND19Q96E35 227 aaPredicted RBP4.62□□□□□ -1.67
RIF1-203ENST00000428287 SMIM10Q96HG1 83 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 SLC5A7Q9GZV3 580 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 MRPS30Q9NP92 439 aaKnown RBP4.62□□□□□ -1.67
RIF1-203ENST00000428287 TRBV24-1A0A075B6N3 115 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 TBL1XO60907 577 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 TXNDC12O95881 172 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 CSTBP04080 98 aaKnown RBP4.62□□□□□ -1.67
RIF1-203ENST00000428287 RBP2P50120 134 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 MAP2K5Q13163 448 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 SLC9A5Q14940 896 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 MESTQ5EB52 335 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 LINC01555Q8NAE3 123 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 OR51D1Q8NGF3 324 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 ZNF563Q8TA94 476 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 SNX33Q8WV41 574 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 MYLIPQ8WY64 445 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 ADGRG7Q96K78 797 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 MICU1Q9BPX6 476 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 FN3KRPQ9HA64 309 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 PIEZO1Q92508 2521 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 GOSR2O14653 212 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 OR10H2O60403 315 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 OR8U9P0C7N5 309 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 DANCRP0C864 163 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 ADRB3P13945 408 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 ZNF14P17017 642 aaPredicted RBP4.62□□□□□ -1.67
RIF1-203ENST00000428287 CRABP1P29762 137 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 DLSTP36957 453 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 RND2P52198 227 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 ADAM8P78325 824 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 GAGE1Q13065 139 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 OR1Q1Q15612 314 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 BPIFB2Q8N4F0 458 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 OR8G5Q8NG78 346 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 OR8U1Q8NH10 309 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 PAQR8Q8TEZ7 354 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 MS4A6EQ96DS6 147 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 GALNT14Q96FL9 552 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 SEC22AQ96IW7 307 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 TBX5Q99593 518 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 ZNF443Q9Y2A4 671 aaPredicted RBP4.62□□□□□ -1.67
RIF1-203ENST00000428287 NOP16Q9Y3C1 178 aaKnown RBP4.62□□□□□ -1.67
RIF1-203ENST00000428287 ZNF264O43296 627 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 CST4P01036 141 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 IFNA17P01571 189 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 DBIP07108 87 aaKnown RBP4.62□□□□□ -1.67
RIF1-203ENST00000428287 SLC6A6P31641 620 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 MC3RP41968 323 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 GAMTQ14353 236 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 RBM39Q14498 530 aaKnown RBP4.62□□□□□ -1.67
RIF1-203ENST00000428287 EMC4Q5J8M3 183 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 YOD1Q5VVQ6 348 aaPredicted RBP4.62□□□□□ -1.67
RIF1-203ENST00000428287 TMEM220Q6QAJ8 160 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 OR2L5Q8NG80 312 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 TERB2Q8NHR7 220 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 SMOC1Q9H4F8 434 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 GDF2Q9UK05 429 aaPredicted RBP4.62□□□□□ -1.67
RIF1-203ENST00000428287 PKD1L2Q7Z442 2459 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 CENPVL1A0A0U1RR11 272 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 STK17BO94768 372 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 XPAP23025 273 aaPredicted RBP4.62□□□□□ -1.67
RIF1-203ENST00000428287 SSR2P43308 183 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 EFNB2P52799 333 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 C9orf64Q5T6V5 341 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 CDK20Q8IZL9 346 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 HIST3H2BBQ8N257 126 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 OR2L2Q8NH16 312 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 ZNRF4Q8WWF5 429 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 RSC1A1Q92681 617 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 SLC6A7Q99884 636 aa4.62□□□□□ -1.67
RIF1-203ENST00000428287 PRG3Q9Y2Y8 225 aaPredicted RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms