RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 NAT2P11245 290 aa14.28□□□□□ -0.12
VRK2-204ENST00000428021 SLC25A16P16260 332 aa14.28□□□□□ -0.12
VRK2-204ENST00000428021 GGT2P36268 569 aa14.28□□□□□ -0.12
VRK2-204ENST00000428021 MPV17P39210 176 aa14.28□□□□□ -0.12
VRK2-204ENST00000428021 PDLIM4P50479 330 aa14.28□□□□□ -0.12
VRK2-204ENST00000428021 PPP1CBP62140 327 aa14.28□□□□□ -0.12
VRK2-204ENST00000428021 CCNIQ14094 377 aa14.28□□□□□ -0.12
VRK2-204ENST00000428021 CRMP1Q14194 572 aa14.28□□□□□ -0.12
VRK2-204ENST00000428021 ALKBH6Q3KRA9 238 aa14.28□□□□□ -0.12
VRK2-204ENST00000428021 SLC18B1Q6NT16 456 aa14.28□□□□□ -0.12
VRK2-204ENST00000428021 IQCF1Q8N6M8 205 aa14.28□□□□□ -0.12
VRK2-204ENST00000428021 OR1F12Q8NHA8 337 aa14.28□□□□□ -0.12
VRK2-204ENST00000428021 ABHD4Q8TB40 342 aa14.28□□□□□ -0.12
VRK2-204ENST00000428021 OR2J1Q9GZK6 312 aa14.28□□□□□ -0.12
VRK2-204ENST00000428021 MYOZ1Q9NP98 299 aaPredicted RBP14.28□□□□□ -0.12
VRK2-204ENST00000428021 KLHL21Q9UJP4 597 aa14.28□□□□□ -0.12
VRK2-204ENST00000428021 POLR1DQ9Y2S0 133 aa14.28□□□□□ -0.12
VRK2-204ENST00000428021 FN1P02751 2386 aaKnown RBP14.27□□□□□ -0.12
VRK2-204ENST00000428021 LOC390937A0A1W2PQ73 354 aa14.27□□□□□ -0.13
VRK2-204ENST00000428021 DBHP09172 617 aa14.27□□□□□ -0.13
VRK2-204ENST00000428021 DAOP14920 347 aa14.27□□□□□ -0.13
VRK2-204ENST00000428021 SLC25A1P53007 311 aa14.27□□□□□ -0.13
VRK2-204ENST00000428021 SELENOVP59797 346 aa14.27□□□□□ -0.13
VRK2-204ENST00000428021 RSPO1Q2MKA7 263 aaPredicted RBP14.27□□□□□ -0.13
VRK2-204ENST00000428021 ZNF718Q3SXZ3 478 aa14.27□□□□□ -0.13
VRK2-204ENST00000428021 C1orf146Q5VVC0 180 aa14.27□□□□□ -0.13
VRK2-204ENST00000428021 MBNL2Q5VZF2 373 aaKnown RBP14.27□□□□□ -0.13
VRK2-204ENST00000428021 ACSM5Q6NUN0 579 aa14.27□□□□□ -0.13
VRK2-204ENST00000428021 SHQ1Q6PI26 577 aaKnown RBP14.27□□□□□ -0.13
VRK2-204ENST00000428021 LYPD4Q6UWN0 246 aa14.27□□□□□ -0.13
VRK2-204ENST00000428021 LINC00346Q8IVM7 164 aa14.27□□□□□ -0.13
VRK2-204ENST00000428021 C1orf174Q8IYL3 243 aa14.27□□□□□ -0.13
VRK2-204ENST00000428021 GJC3Q8NFK1 279 aa14.27□□□□□ -0.13
VRK2-204ENST00000428021 OR51L1Q8NGJ5 315 aa14.27□□□□□ -0.13
VRK2-204ENST00000428021 OR9Q1Q8NGQ5 310 aa14.27□□□□□ -0.13
VRK2-204ENST00000428021 OR2T4Q8NH00 348 aa14.27□□□□□ -0.13
VRK2-204ENST00000428021 TEX47Q8TBZ9 253 aa14.27□□□□□ -0.13
VRK2-204ENST00000428021 KLF14Q8TD94 323 aaPredicted RBP14.27□□□□□ -0.13
VRK2-204ENST00000428021 NRBF2Q96F24 287 aa14.27□□□□□ -0.13
VRK2-204ENST00000428021 DUS3LQ96G46 650 aaKnown RBP14.27□□□□□ -0.13
VRK2-204ENST00000428021 POFUT1Q9H488 388 aa14.27□□□□□ -0.13
VRK2-204ENST00000428021 ELOVL3Q9HB03 270 aa14.27□□□□□ -0.13
VRK2-204ENST00000428021 TBCCD1Q9NVR7 557 aa14.27□□□□□ -0.13
VRK2-204ENST00000428021 SLCO1C1Q9NYB5 712 aa14.27□□□□□ -0.13
VRK2-204ENST00000428021 CYB5R1Q9UHQ9 305 aa14.27□□□□□ -0.13
VRK2-204ENST00000428021 ATPIF1Q9UII2 106 aa14.27□□□□□ -0.13
VRK2-204ENST00000428021 ANK3Q12955 4377 aaKnown RBP14.27□□□□□ -0.13
VRK2-204ENST00000428021 LYNX1G3V0Z9 82 aa14.26□□□□□ -0.13
VRK2-204ENST00000428021 H3BN98 237 aa14.26□□□□□ -0.13
VRK2-204ENST00000428021 NDUFS8O00217 210 aa14.26□□□□□ -0.13
VRK2-204ENST00000428021 DEAF1O75398 565 aaPredicted RBP14.26□□□□□ -0.13
VRK2-204ENST00000428021 ABHD16AO95870 558 aa14.26□□□□□ -0.13
VRK2-204ENST00000428021 HPXP02790 462 aa14.26□□□□□ -0.13
VRK2-204ENST00000428021 ERCC1P07992 297 aaPredicted RBP14.26□□□□□ -0.13
VRK2-204ENST00000428021 LYNX1P0DP58 116 aa14.26□□□□□ -0.13
VRK2-204ENST00000428021 OSMP13725 252 aa14.26□□□□□ -0.13
VRK2-204ENST00000428021 ANXA8P13928 327 aa14.26□□□□□ -0.13
VRK2-204ENST00000428021 GRK5P34947 590 aa14.26□□□□□ -0.13
VRK2-204ENST00000428021 LOXL1Q08397 574 aaPredicted RBP14.26□□□□□ -0.13
VRK2-204ENST00000428021 NKPD1Q17RQ9 610 aa14.26□□□□□ -0.13
VRK2-204ENST00000428021 KRTAP27-1Q3LI81 207 aa14.26□□□□□ -0.13
VRK2-204ENST00000428021 ELFN2Q5R3F8 820 aa14.26□□□□□ -0.13
VRK2-204ENST00000428021 UNQ6126/PRO20091Q6UXV3 157 aa14.26□□□□□ -0.13
VRK2-204ENST00000428021 CFAP77Q6ZQR2 320 aa14.26□□□□□ -0.13
VRK2-204ENST00000428021 ZNF786Q8N393 782 aa14.26□□□□□ -0.13
VRK2-204ENST00000428021 PROKR2Q8NFJ6 384 aa14.26□□□□□ -0.13
VRK2-204ENST00000428021 UBASH3BQ8TF42 649 aa14.26□□□□□ -0.13
VRK2-204ENST00000428021 IPCEF1Q8WWN9 437 aaPredicted RBP14.26□□□□□ -0.13
VRK2-204ENST00000428021 GTF3AQ92664 365 aaKnown RBP14.26□□□□□ -0.13
VRK2-204ENST00000428021 COQ7Q99807 217 aa14.26□□□□□ -0.13
VRK2-204ENST00000428021 PNRC2Q9NPJ4 139 aaKnown RBP14.26□□□□□ -0.13
VRK2-204ENST00000428021 HINT3Q9NQE9 182 aaKnown RBP14.26□□□□□ -0.13
VRK2-204ENST00000428021 CMC2Q9NRP2 79 aa14.26□□□□□ -0.13
VRK2-204ENST00000428021 STARD10Q9Y365 291 aa14.26□□□□□ -0.13
VRK2-204ENST00000428021 GRIP1Q9Y3R0 1128 aa14.26□□□□□ -0.13
VRK2-204ENST00000428021 TVP23AA6NH52 213 aa14.25□□□□□ -0.13
VRK2-204ENST00000428021 C17orf100A8MU93 164 aa14.25□□□□□ -0.13
VRK2-204ENST00000428021 H3BSA7 217 aa14.25□□□□□ -0.13
VRK2-204ENST00000428021 NCR1O76036 304 aa14.25□□□□□ -0.13
VRK2-204ENST00000428021 IFNGP01579 166 aa14.25□□□□□ -0.13
VRK2-204ENST00000428021 HLA-DQA2P01906 255 aa14.25□□□□□ -0.13
VRK2-204ENST00000428021 GYPBP06028 91 aa14.25□□□□□ -0.13
VRK2-204ENST00000428021 CLUP10909 449 aa14.25□□□□□ -0.13
VRK2-204ENST00000428021 PSKH1P11801 424 aa14.25□□□□□ -0.13
VRK2-204ENST00000428021 SPI1P17947 270 aa14.25□□□□□ -0.13
VRK2-204ENST00000428021 GIFP27352 417 aa14.25□□□□□ -0.13
VRK2-204ENST00000428021 NR4A2P43354 598 aa14.25□□□□□ -0.13
VRK2-204ENST00000428021 ARHGDIAP52565 204 aa14.25□□□□□ -0.13
VRK2-204ENST00000428021 RIPPLY3P57055 190 aa14.25□□□□□ -0.13
VRK2-204ENST00000428021 CDK5Q00535 292 aa14.25□□□□□ -0.13
VRK2-204ENST00000428021 GINS1Q14691 196 aa14.25□□□□□ -0.13
VRK2-204ENST00000428021 ATP6AP1Q15904 470 aa14.25□□□□□ -0.13
VRK2-204ENST00000428021 CARTPTQ16568 116 aa14.25□□□□□ -0.13
VRK2-204ENST00000428021 SLC27A4Q6P1M0 643 aa14.25□□□□□ -0.13
VRK2-204ENST00000428021 FAHD1Q6P587 224 aa14.25□□□□□ -0.13
VRK2-204ENST00000428021 ARL9Q6T311 187 aa14.25□□□□□ -0.13
VRK2-204ENST00000428021 MAP6Q96JE9 813 aa14.25□□□□□ -0.13
VRK2-204ENST00000428021 HCAR1Q9BXC0 346 aa14.25□□□□□ -0.13
VRK2-204ENST00000428021 HDHD2Q9H0R4 259 aa14.25□□□□□ -0.13
VRK2-204ENST00000428021 GPR160Q9UJ42 338 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms