RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 OR2AJ1Q8NGZ0 328 aa12.44□□□□□ -0.42
APOBEC3D-202ENST00000427494 FAM3DQ96BQ1 224 aa12.44□□□□□ -0.42
APOBEC3D-202ENST00000427494 LOXL4Q96JB6 756 aa12.44□□□□□ -0.42
APOBEC3D-202ENST00000427494 PHF3Q92576 2039 aaKnown RBP12.44□□□□□ -0.42
APOBEC3D-202ENST00000427494 DMDP11532 3685 aa12.44□□□□□ -0.42
APOBEC3D-202ENST00000427494 IGHV3-15A0A0B4J1V0 119 aa12.43□□□□□ -0.42
APOBEC3D-202ENST00000427494 ACOT7O00154 380 aa12.43□□□□□ -0.42
APOBEC3D-202ENST00000427494 XRCC3O43542 346 aa12.43□□□□□ -0.42
APOBEC3D-202ENST00000427494 TLX3O43711 291 aaPredicted RBP12.43□□□□□ -0.42
APOBEC3D-202ENST00000427494 LMX1BO60663 402 aa12.43□□□□□ -0.42
APOBEC3D-202ENST00000427494 CBR3O75828 277 aa12.43□□□□□ -0.42
APOBEC3D-202ENST00000427494 P04436 131 aa12.43□□□□□ -0.42
APOBEC3D-202ENST00000427494 ZNF17P17021 662 aa12.43□□□□□ -0.42
APOBEC3D-202ENST00000427494 C2orf76Q3KRA6 126 aa12.43□□□□□ -0.42
APOBEC3D-202ENST00000427494 PLA2G2CQ5R387 149 aa12.43□□□□□ -0.42
APOBEC3D-202ENST00000427494 TCTE3Q8IZS6 198 aa12.43□□□□□ -0.42
APOBEC3D-202ENST00000427494 SGCZQ96LD1 299 aa12.43□□□□□ -0.42
APOBEC3D-202ENST00000427494 DDA1Q9BW61 102 aa12.43□□□□□ -0.42
APOBEC3D-202ENST00000427494 TP63Q9H3D4 680 aaPredicted RBP12.43□□□□□ -0.42
APOBEC3D-202ENST00000427494 HRASLSQ9HDD0 168 aa12.43□□□□□ -0.42
APOBEC3D-202ENST00000427494 KLK11Q9UBX7 282 aa12.43□□□□□ -0.42
APOBEC3D-202ENST00000427494 MED12Q93074 2177 aa12.43□□□□□ -0.42
APOBEC3D-202ENST00000427494 A0A0G2JMM0 328 aa12.43□□□□□ -0.42
APOBEC3D-202ENST00000427494 LOC100289279A0A1B0GTE1 492 aa12.43□□□□□ -0.42
APOBEC3D-202ENST00000427494 A0A1W2PPB8 328 aa12.43□□□□□ -0.42
APOBEC3D-202ENST00000427494 A0A1W2PRS3 328 aa12.43□□□□□ -0.42
APOBEC3D-202ENST00000427494 KIR3DP1A8MWS1 328 aa12.43□□□□□ -0.42
APOBEC3D-202ENST00000427494 CTAG2O75638 210 aa12.43□□□□□ -0.42
APOBEC3D-202ENST00000427494 GSTT2BP0CG30 244 aa12.43□□□□□ -0.42
APOBEC3D-202ENST00000427494 CD59P13987 128 aa12.43□□□□□ -0.42
APOBEC3D-202ENST00000427494 HSD11B1P28845 292 aa12.43□□□□□ -0.42
APOBEC3D-202ENST00000427494 H3F3AP84243 136 aa12.43□□□□□ -0.42
APOBEC3D-202ENST00000427494 SPOCK1Q08629 439 aa12.43□□□□□ -0.42
APOBEC3D-202ENST00000427494 HIST3H3Q16695 136 aa12.43□□□□□ -0.42
APOBEC3D-202ENST00000427494 FAM166AQ6J272 317 aa12.43□□□□□ -0.42
APOBEC3D-202ENST00000427494 ANKRD16Q6P6B7 361 aa12.43□□□□□ -0.42
APOBEC3D-202ENST00000427494 BTN2A1Q7KYR7 527 aa12.43□□□□□ -0.42
APOBEC3D-202ENST00000427494 NOXA1Q86UR1 476 aa12.43□□□□□ -0.42
APOBEC3D-202ENST00000427494 NAXDQ8IW45 347 aa12.43□□□□□ -0.42
APOBEC3D-202ENST00000427494 ESX1Q8N693 406 aa12.43□□□□□ -0.42
APOBEC3D-202ENST00000427494 OR51A2Q8NGJ7 313 aa12.43□□□□□ -0.42
APOBEC3D-202ENST00000427494 PIGQQ9BRB3 760 aa12.43□□□□□ -0.42
APOBEC3D-202ENST00000427494 PBOV1Q9GZY1 135 aa12.43□□□□□ -0.42
APOBEC3D-202ENST00000427494 ING3Q9NXR8 418 aa12.43□□□□□ -0.42
APOBEC3D-202ENST00000427494 PCSK5Q92824 1860 aa12.42□□□□□ -0.42
APOBEC3D-202ENST00000427494 TMEM272A0A1B0GTI8 110 aa12.42□□□□□ -0.42
APOBEC3D-202ENST00000427494 C7orf66A4D0T2 115 aa12.42□□□□□ -0.42
APOBEC3D-202ENST00000427494 C9orf172C9J069 976 aa12.42□□□□□ -0.42
APOBEC3D-202ENST00000427494 ZNF878C9JN71 531 aa12.42□□□□□ -0.42
APOBEC3D-202ENST00000427494 EIF1BO60739 113 aaKnown RBP12.42□□□□□ -0.42
APOBEC3D-202ENST00000427494 TPPPO94811 219 aa12.42□□□□□ -0.42
APOBEC3D-202ENST00000427494 TTRP02766 147 aa12.42□□□□□ -0.42
APOBEC3D-202ENST00000427494 H2AFB2P0C5Z0 115 aa12.42□□□□□ -0.42
APOBEC3D-202ENST00000427494 ACSM4P0C7M7 580 aa12.42□□□□□ -0.42
APOBEC3D-202ENST00000427494 SDHBP21912 280 aa12.42□□□□□ -0.42
APOBEC3D-202ENST00000427494 HTR2CP28335 458 aa12.42□□□□□ -0.42
APOBEC3D-202ENST00000427494 DCTDP32321 178 aa12.42□□□□□ -0.42
APOBEC3D-202ENST00000427494 CSNK2A1P68400 391 aaPredicted RBP12.42□□□□□ -0.42
APOBEC3D-202ENST00000427494 IFITM2Q01629 132 aa12.42□□□□□ -0.42
APOBEC3D-202ENST00000427494 TAF13Q15543 124 aa12.42□□□□□ -0.42
APOBEC3D-202ENST00000427494 LUZP2Q86TE4 346 aa12.42□□□□□ -0.42
APOBEC3D-202ENST00000427494 ELMOD2Q8IZ81 293 aa12.42□□□□□ -0.42
APOBEC3D-202ENST00000427494 SCMH1Q96GD3 660 aa12.42□□□□□ -0.42
APOBEC3D-202ENST00000427494 RNF170Q96K19 258 aa12.42□□□□□ -0.42
APOBEC3D-202ENST00000427494 NAA11Q9BSU3 229 aaPredicted RBP12.42□□□□□ -0.42
APOBEC3D-202ENST00000427494 MED28Q9H204 178 aa12.42□□□□□ -0.42
APOBEC3D-202ENST00000427494 DIABLOQ9NR28 239 aa12.42□□□□□ -0.42
APOBEC3D-202ENST00000427494 CGGBP1Q9UFW8 167 aaPredicted RBP12.42□□□□□ -0.42
APOBEC3D-202ENST00000427494 KIAA1549Q9HCM3 1950 aa12.42□□□□□ -0.42
APOBEC3D-202ENST00000427494 ANKRD20A5PA0PJZ0 165 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 DCDC2BA2VCK2 349 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 MEGF11A6BM72 1044 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 NAP1L6A6NFF2 107 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 GGT3PA6NGU5 568 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 NPIPA2E9PIF3 369 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 NPIPA3F8WFD2 350 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 TNFSF11O14788 317 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 GMDSO60547 372 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 YES1P07947 543 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 NR2C1P13056 603 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 CSNK1A1P48729 337 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 GABREP78334 506 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 TMEM255AQ5JRV8 349 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 GLYATL3Q5SZD4 288 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 SFRP4Q6FHJ7 346 aaPredicted RBP12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 JAGN1Q8N5M9 183 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 SLC25A28Q96A46 364 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 PHF21AQ96BD5 680 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 FGGYQ96C11 551 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 LIN37Q96GY3 246 aaPredicted RBP12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 UCN2Q96RP3 112 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 SLC17A5Q9NRA2 495 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 P4HTMQ9NXG6 502 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 GLTPQ9NZD2 209 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 ASH2LQ9UBL3 628 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 R4GN57 208 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 A0A0J9YW62 118 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 GJE1A6NN92 205 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 SYT7O43581 403 aa12.41□□□□□ -0.42
APOBEC3D-202ENST00000427494 WDPCPO95876 746 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms