RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 OR5AP2Q8NGF4 316 aa13.65□□□□□ -0.22
C9orf3-204ENST00000424143 ARL11Q969Q4 196 aa13.65□□□□□ -0.22
C9orf3-204ENST00000424143 ADIPOR1Q96A54 375 aa13.65□□□□□ -0.22
C9orf3-204ENST00000424143 PIK3IP1Q96FE7 263 aa13.65□□□□□ -0.22
C9orf3-204ENST00000424143 LMF1Q96S06 567 aa13.65□□□□□ -0.22
C9orf3-204ENST00000424143 G6PC2Q9NQR9 355 aa13.65□□□□□ -0.22
C9orf3-204ENST00000424143 LRP12Q9Y561 859 aa13.65□□□□□ -0.22
C9orf3-204ENST00000424143 A8MVM7 634 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 C17orf105B2RV13 164 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 EFSO43281 561 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 OR2T1O43869 369 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 KLF8O95600 359 aaPredicted RBP13.64□□□□□ -0.23
C9orf3-204ENST00000424143 IGKV3-11P04433 115 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 CRHP06850 196 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 FBXO45P0C2W1 286 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 PSMB6P28072 239 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 SLC6A9P48067 706 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 CCR5P51681 352 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 POLR2HP52434 150 aaKnown RBP13.64□□□□□ -0.23
C9orf3-204ENST00000424143 GPR85P60893 370 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 MFGE8Q08431 387 aaPredicted RBP13.64□□□□□ -0.23
C9orf3-204ENST00000424143 FAM189A2Q15884 450 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 HFEQ30201 348 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 RAB11FIP2Q7L804 512 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 SPRED2Q7Z698 418 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 ELP5Q8TE02 316 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 PTPMT1Q8WUK0 201 aaPredicted RBP13.64□□□□□ -0.23
C9orf3-204ENST00000424143 PATE1Q8WXA2 126 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 MRGPRX1Q96LB2 322 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 KXD1Q9BQD3 176 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 NXF5Q9H1B4 397 aaKnown RBP13.64□□□□□ -0.23
C9orf3-204ENST00000424143 OR52A1Q9UKL2 312 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 PCDHB10Q9UN67 800 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 CPAMD8Q8IZJ3 1885 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 COL5A1P20908 1838 aaPredicted RBP13.64□□□□□ -0.23
C9orf3-204ENST00000424143 F5H0A9 414 aaPredicted RBP13.64□□□□□ -0.23
C9orf3-204ENST00000424143 PRAMEF26H0Y7S4 382 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 PLPP3O14495 311 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 NUPL2O15504 423 aaKnown RBP13.64□□□□□ -0.23
C9orf3-204ENST00000424143 SLC16A7O60669 478 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 SLC25A12O75746 678 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 HLA-DQA2P01906 255 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 CHRM2P08172 466 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 SPARCP09486 303 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 MAOAP21397 527 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 VEGFBP49765 207 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 MMP16P51512 607 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 ATP1B3P54709 279 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 IL13RA1P78552 427 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 ZNF117Q03924 483 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 SCRN3Q0VDG4 424 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 PPP1R1AQ13522 171 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 EIF2B1Q14232 305 aaKnown RBP13.64□□□□□ -0.23
C9orf3-204ENST00000424143 NNATQ16517 81 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 ZNF529Q6P280 563 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 FJX1Q86VR8 437 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 OR13C3Q8NGS6 347 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 RNF141Q8WVD5 230 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 BADQ92934 168 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 MRGPRFQ96AM1 343 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 ZNF524Q96C55 264 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 SAT2Q96F10 170 aaPredicted RBP13.64□□□□□ -0.23
C9orf3-204ENST00000424143 TSNAXQ99598 290 aaKnown RBP13.64□□□□□ -0.23
C9orf3-204ENST00000424143 CMKLR1Q99788 373 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 CST11Q9H112 138 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 MTIF3Q9H2K0 278 aaKnown RBP13.64□□□□□ -0.23
C9orf3-204ENST00000424143 MMP26Q9NRE1 261 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 LANCL2Q9NS86 450 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 PISDQ9UG56 409 aa13.64□□□□□ -0.23
C9orf3-204ENST00000424143 ATG2AQ2TAZ0 1938 aa13.63□□□□□ -0.23
C9orf3-204ENST00000424143 TSPAN2O60636 221 aa13.63□□□□□ -0.23
C9orf3-204ENST00000424143 STK17BO94768 372 aa13.63□□□□□ -0.23
C9orf3-204ENST00000424143 CTSBP07858 339 aa13.63□□□□□ -0.23
C9orf3-204ENST00000424143 ZNF28P17035 718 aa13.63□□□□□ -0.23
C9orf3-204ENST00000424143 BDKRB2P30411 391 aa13.63□□□□□ -0.23
C9orf3-204ENST00000424143 PPP1CAP62136 330 aa13.63□□□□□ -0.23
C9orf3-204ENST00000424143 HHEXQ03014 270 aa13.63□□□□□ -0.23
C9orf3-204ENST00000424143 EIF3IQ13347 325 aaKnown RBP13.63□□□□□ -0.23
C9orf3-204ENST00000424143 TDGQ13569 410 aa13.63□□□□□ -0.23
C9orf3-204ENST00000424143 FAM74A1Q5RGS3 127 aa13.63□□□□□ -0.23
C9orf3-204ENST00000424143 VAX1Q5SQQ9 334 aa13.63□□□□□ -0.23
C9orf3-204ENST00000424143 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.63□□□□□ -0.23
C9orf3-204ENST00000424143 CORO6Q6QEF8 472 aa13.63□□□□□ -0.23
C9orf3-204ENST00000424143 HOGA1Q86XE5 327 aa13.63□□□□□ -0.23
C9orf3-204ENST00000424143 SPAG16Q8N0X2 631 aa13.63□□□□□ -0.23
C9orf3-204ENST00000424143 GTPBP8Q8N3Z3 284 aaPredicted RBP13.63□□□□□ -0.23
C9orf3-204ENST00000424143 FAM160A2Q8N612 972 aaPredicted RBP13.63□□□□□ -0.23
C9orf3-204ENST00000424143 GATSQ8NAP1 163 aa13.63□□□□□ -0.23
C9orf3-204ENST00000424143 OR1S2Q8NGQ3 325 aa13.63□□□□□ -0.23
C9orf3-204ENST00000424143 ZNF75AQ96N20 296 aa13.63□□□□□ -0.23
C9orf3-204ENST00000424143 SCGB3A2Q96PL1 93 aa13.63□□□□□ -0.23
C9orf3-204ENST00000424143 SEC11CQ9BY50 192 aa13.63□□□□□ -0.23
C9orf3-204ENST00000424143 KCNK15Q9H427 330 aa13.63□□□□□ -0.23
C9orf3-204ENST00000424143 ZNF629Q9UEG4 869 aaPredicted RBP13.63□□□□□ -0.23
C9orf3-204ENST00000424143 IGKV3D-11A0A0A0MRZ8 115 aa13.62□□□□□ -0.23
C9orf3-204ENST00000424143 LOC107986453A0A1B0GWG9 222 aa13.62□□□□□ -0.23
C9orf3-204ENST00000424143 OR2AT4A6NND4 320 aa13.62□□□□□ -0.23
C9orf3-204ENST00000424143 ZNF208O43345 1280 aa13.62□□□□□ -0.23
C9orf3-204ENST00000424143 PLATP00750 562 aa13.62□□□□□ -0.23
C9orf3-204ENST00000424143 GSTP1P09211 210 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms