RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 SPNS1Q9H2V7 528 aa2.02□□□□□ -2.09
LINC00397-201ENST00000422074 TMEM185BQ9H7F4 350 aa2.02□□□□□ -2.09
LINC00397-201ENST00000422074 ZNF430Q9H8G1 570 aaPredicted RBP2.02□□□□□ -2.09
LINC00397-201ENST00000422074 WIF1Q9Y5W5 379 aa2.02□□□□□ -2.09
LINC00397-201ENST00000422074 CAMTA1Q9Y6Y1 1673 aa2.02□□□□□ -2.09
LINC00397-201ENST00000422074 TUBGCP6Q96RT7 1819 aa2.01□□□□□ -2.09
LINC00397-201ENST00000422074 SMKR1H3BMG3 65 aa2.01□□□□□ -2.09
LINC00397-201ENST00000422074 EIF3HO15372 352 aaKnown RBP eCLIP2.01□□□□□ -2.09
LINC00397-201ENST00000422074 RBFOX2O43251 390 aaKnown RBP eCLIP2.01□□□□□ -2.09
LINC00397-201ENST00000422074 CLDN11O75508 207 aa2.01□□□□□ -2.09
LINC00397-201ENST00000422074 EIF4EP06730 217 aaKnown RBP2.01□□□□□ -2.09
LINC00397-201ENST00000422074 TPM2P07951 284 aa2.01□□□□□ -2.09
LINC00397-201ENST00000422074 ZNF286BP0CG31 522 aa2.01□□□□□ -2.09
LINC00397-201ENST00000422074 HMOX2P30519 316 aa2.01□□□□□ -2.09
LINC00397-201ENST00000422074 SSTR5P35346 364 aa2.01□□□□□ -2.09
LINC00397-201ENST00000422074 HCAR3P49019 387 aa2.01□□□□□ -2.09
LINC00397-201ENST00000422074 ZNF138P52744 262 aa2.01□□□□□ -2.09
LINC00397-201ENST00000422074 ESRRGP62508 458 aa2.01□□□□□ -2.09
LINC00397-201ENST00000422074 LIPEQ05469 1076 aa2.01□□□□□ -2.09
LINC00397-201ENST00000422074 IFT88Q13099 833 aa2.01□□□□□ -2.09
LINC00397-201ENST00000422074 SELENBP1Q13228 472 aa2.01□□□□□ -2.09
LINC00397-201ENST00000422074 IDI1Q13907 227 aa2.01□□□□□ -2.09
LINC00397-201ENST00000422074 RCAN2Q14206 197 aa2.01□□□□□ -2.09
LINC00397-201ENST00000422074 IRF4Q15306 451 aa2.01□□□□□ -2.09
LINC00397-201ENST00000422074 CHRNA6Q15825 494 aa2.01□□□□□ -2.09
LINC00397-201ENST00000422074 SMUG1Q53HV7 270 aa2.01□□□□□ -2.09
LINC00397-201ENST00000422074 GPR107Q5VW38 600 aa2.01□□□□□ -2.09
LINC00397-201ENST00000422074 DUX4L9Q6RFH8 374 aaPredicted RBP2.01□□□□□ -2.09
LINC00397-201ENST00000422074 C12orf54Q6X4T0 127 aa2.01□□□□□ -2.09
LINC00397-201ENST00000422074 BZW1Q7L1Q6 419 aaKnown RBP2.01□□□□□ -2.09
LINC00397-201ENST00000422074 EIF3MQ7L2H7 374 aaKnown RBP2.01□□□□□ -2.09
LINC00397-201ENST00000422074 SNX20Q7Z614 316 aa2.01□□□□□ -2.09
LINC00397-201ENST00000422074 CBR4Q8N4T8 237 aa2.01□□□□□ -2.09
LINC00397-201ENST00000422074 ZFP41Q8N8Y5 198 aa2.01□□□□□ -2.09
LINC00397-201ENST00000422074 PHF10Q8WUB8 498 aaKnown RBP2.01□□□□□ -2.09
LINC00397-201ENST00000422074 CAPSLQ8WWF8 208 aa2.01□□□□□ -2.09
LINC00397-201ENST00000422074 TMEM230Q96A57 120 aa2.01□□□□□ -2.09
LINC00397-201ENST00000422074 LINC00477Q96M19 166 aa2.01□□□□□ -2.09
LINC00397-201ENST00000422074 RNF157Q96PX1 679 aa2.01□□□□□ -2.09
LINC00397-201ENST00000422074 LZTS2Q9BRK4 669 aa2.01□□□□□ -2.09
LINC00397-201ENST00000422074 EDA2RQ9HAV5 297 aa2.01□□□□□ -2.09
LINC00397-201ENST00000422074 C12orf10Q9HB07 376 aa2.01□□□□□ -2.09
LINC00397-201ENST00000422074 PTTG3PQ9NZH4 202 aa2.01□□□□□ -2.09
LINC00397-201ENST00000422074 GCNT4Q9P109 453 aa2.01□□□□□ -2.09
LINC00397-201ENST00000422074 VANGL2Q9ULK5 521 aa2.01□□□□□ -2.09
LINC00397-201ENST00000422074 KCNE3Q9Y6H6 103 aa2.01□□□□□ -2.09
LINC00397-201ENST00000422074 IGSF9BQ9UPX0 1349 aa2□□□□□ -2.09
LINC00397-201ENST00000422074 TRAV19A0A0A6YYK7 116 aa2□□□□□ -2.09
LINC00397-201ENST00000422074 OR2AG2A6NM03 316 aa2□□□□□ -2.09
LINC00397-201ENST00000422074 L7N2F9 121 aa2□□□□□ -2.09
LINC00397-201ENST00000422074 EIF4E2O60573 245 aaKnown RBP2□□□□□ -2.09
LINC00397-201ENST00000422074 CCNB2O95067 398 aa2□□□□□ -2.09
LINC00397-201ENST00000422074 ARG1P05089 322 aa2□□□□□ -2.09
LINC00397-201ENST00000422074 CD3GP09693 182 aa2□□□□□ -2.09
LINC00397-201ENST00000422074 BCKDHBP21953 392 aa2□□□□□ -2.09
LINC00397-201ENST00000422074 PRRX1P54821 245 aa2□□□□□ -2.09
LINC00397-201ENST00000422074 CDKN2DP55273 166 aa2□□□□□ -2.09
LINC00397-201ENST00000422074 RPS15P62841 145 aaKnown RBP2□□□□□ -2.09
LINC00397-201ENST00000422074 BEX3Q00994 111 aa2□□□□□ -2.09
LINC00397-201ENST00000422074 SP4Q02446 784 aa2□□□□□ -2.09
LINC00397-201ENST00000422074 CUL2Q13617 745 aa2□□□□□ -2.09
LINC00397-201ENST00000422074 TRAM2Q15035 370 aa2□□□□□ -2.09
LINC00397-201ENST00000422074 PON2Q15165 354 aa2□□□□□ -2.09
LINC00397-201ENST00000422074 ALKBH6Q3KRA9 238 aa2□□□□□ -2.09
LINC00397-201ENST00000422074 ZNF684Q5T5D7 378 aa2□□□□□ -2.09
LINC00397-201ENST00000422074 TWF2Q6IBS0 349 aaKnown RBP2□□□□□ -2.09
LINC00397-201ENST00000422074 CEMP1Q6PRD7 247 aaPredicted RBP2□□□□□ -2.09
LINC00397-201ENST00000422074 FBXW12Q6X9E4 464 aa2□□□□□ -2.09
LINC00397-201ENST00000422074 SSX9Q7RTT3 188 aa2□□□□□ -2.09
LINC00397-201ENST00000422074 ZNF615Q8N8J6 731 aa2□□□□□ -2.09
LINC00397-201ENST00000422074 C15orf56Q8N910 161 aa2□□□□□ -2.09
LINC00397-201ENST00000422074 SNX31Q8N9S9 440 aa2□□□□□ -2.09
LINC00397-201ENST00000422074 TTC29Q8NA56 475 aaPredicted RBP2□□□□□ -2.09
LINC00397-201ENST00000422074 CHST4Q8NCG5 386 aa2□□□□□ -2.09
LINC00397-201ENST00000422074 PIFOQ8TCI5 191 aa2□□□□□ -2.09
LINC00397-201ENST00000422074 APH1BQ8WW43 257 aa2□□□□□ -2.09
LINC00397-201ENST00000422074 SEH1LQ96EE3 360 aa2□□□□□ -2.09
LINC00397-201ENST00000422074 GALNT14Q96FL9 552 aa2□□□□□ -2.09
LINC00397-201ENST00000422074 DUS3LQ96G46 650 aaKnown RBP2□□□□□ -2.09
LINC00397-201ENST00000422074 PANX1Q96RD7 426 aa2□□□□□ -2.09
LINC00397-201ENST00000422074 TGS1Q96RS0 853 aaKnown RBP2□□□□□ -2.09
LINC00397-201ENST00000422074 CAMK2N2Q96S95 79 aa2□□□□□ -2.09
LINC00397-201ENST00000422074 SAV1Q9H4B6 383 aaPredicted RBP2□□□□□ -2.09
LINC00397-201ENST00000422074 UBE2ZQ9H832 354 aaPredicted RBP2□□□□□ -2.09
LINC00397-201ENST00000422074 VPS37BQ9H9H4 285 aa2□□□□□ -2.09
LINC00397-201ENST00000422074 MRM3Q9HC36 420 aaKnown RBP2□□□□□ -2.09
LINC00397-201ENST00000422074 CCNB1IP1Q9NPC3 277 aa2□□□□□ -2.09
LINC00397-201ENST00000422074 ZDHHC4Q9NPG8 344 aa2□□□□□ -2.09
LINC00397-201ENST00000422074 LYARQ9NX58 379 aaKnown RBP2□□□□□ -2.09
LINC00397-201ENST00000422074 SLC17A4Q9Y2C5 497 aa2□□□□□ -2.09
LINC00397-201ENST00000422074 COL5A1P20908 1838 aaPredicted RBP1.99□□□□□ -2.09
LINC00397-201ENST00000422074 A0A1B0GW55 424 aa1.99□□□□□ -2.09
LINC00397-201ENST00000422074 TMEM223A0PJW6 202 aa1.99□□□□□ -2.09
LINC00397-201ENST00000422074 C7orf66A4D0T2 115 aa1.99□□□□□ -2.09
LINC00397-201ENST00000422074 SYCE1LA8MT33 242 aa1.99□□□□□ -2.09
LINC00397-201ENST00000422074 RP2O75695 350 aa1.99□□□□□ -2.09
LINC00397-201ENST00000422074 LSM8O95777 96 aaKnown RBP1.99□□□□□ -2.09
LINC00397-201ENST00000422074 DUX4L2P0CJ85 424 aa1.99□□□□□ -2.09
LINC00397-201ENST00000422074 DUX4L3P0CJ86 424 aa1.99□□□□□ -2.09
LINC00397-201ENST00000422074 DUX4L5P0CJ88 424 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms