RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 STON2Q8WXE9 905 aa10.75□□□□□ -0.69
LINC00339-203ENST00000420503 PKP2Q99959 881 aa10.75□□□□□ -0.69
LINC00339-203ENST00000420503 TMEM246Q9BRR3 403 aa10.75□□□□□ -0.69
LINC00339-203ENST00000420503 ALG12Q9BV10 488 aa10.75□□□□□ -0.69
LINC00339-203ENST00000420503 SSBP3Q9BWW4 388 aaPredicted RBP10.75□□□□□ -0.69
LINC00339-203ENST00000420503 CHIAQ9BZP6 476 aa10.75□□□□□ -0.69
LINC00339-203ENST00000420503 SLITRK2Q9H156 845 aa10.75□□□□□ -0.69
LINC00339-203ENST00000420503 ZMAT3Q9HA38 289 aaKnown RBP10.75□□□□□ -0.69
LINC00339-203ENST00000420503 PTTG3PQ9NZH4 202 aa10.75□□□□□ -0.69
LINC00339-203ENST00000420503 ADAM18Q9Y3Q7 739 aa10.75□□□□□ -0.69
LINC00339-203ENST00000420503 SNX13Q9Y5W8 968 aa10.75□□□□□ -0.69
LINC00339-203ENST00000420503 A0A0G2JK05 382 aa10.74□□□□□ -0.69
LINC00339-203ENST00000420503 F5H5P2 479 aa10.74□□□□□ -0.69
LINC00339-203ENST00000420503 H3BSA7 217 aa10.74□□□□□ -0.69
LINC00339-203ENST00000420503 J3KTA2 159 aa10.74□□□□□ -0.69
LINC00339-203ENST00000420503 ANGPT2O15123 496 aa10.74□□□□□ -0.69
LINC00339-203ENST00000420503 MLNRO43193 412 aa10.74□□□□□ -0.69
LINC00339-203ENST00000420503 OR5F1O95221 314 aa10.74□□□□□ -0.69
LINC00339-203ENST00000420503 SFTPBP07988 381 aa10.74□□□□□ -0.69
LINC00339-203ENST00000420503 LIPAP38571 399 aa10.74□□□□□ -0.69
LINC00339-203ENST00000420503 MDH1P40925 334 aaKnown RBP10.74□□□□□ -0.69
LINC00339-203ENST00000420503 RBM34P42696 430 aaKnown RBP10.74□□□□□ -0.69
LINC00339-203ENST00000420503 ARHGDIAP52565 204 aa10.74□□□□□ -0.69
LINC00339-203ENST00000420503 RAG2P55895 527 aa10.74□□□□□ -0.69
LINC00339-203ENST00000420503 FGF12P61328 243 aa10.74□□□□□ -0.69
LINC00339-203ENST00000420503 HIST2H2BDQ6DRA6 164 aa10.74□□□□□ -0.69
LINC00339-203ENST00000420503 OR2T2Q6IF00 324 aa10.74□□□□□ -0.69
LINC00339-203ENST00000420503 FIP1L1Q6UN15 594 aaKnown RBP10.74□□□□□ -0.69
LINC00339-203ENST00000420503 CCDC80Q76M96 950 aa10.74□□□□□ -0.69
LINC00339-203ENST00000420503 HDDC2Q7Z4H3 204 aa10.74□□□□□ -0.69
LINC00339-203ENST00000420503 MOGAT3Q86VF5 341 aa10.74□□□□□ -0.69
LINC00339-203ENST00000420503 MEGF10Q96KG7 1140 aa10.74□□□□□ -0.69
LINC00339-203ENST00000420503 WDR76Q9H967 626 aa10.74□□□□□ -0.69
LINC00339-203ENST00000420503 ELOVL3Q9HB03 270 aa10.74□□□□□ -0.69
LINC00339-203ENST00000420503 MAN2C1Q9NTJ4 1040 aa10.74□□□□□ -0.69
LINC00339-203ENST00000420503 C1RLQ9NZP8 487 aa10.74□□□□□ -0.69
LINC00339-203ENST00000420503 CGGBP1Q9UFW8 167 aaPredicted RBP10.74□□□□□ -0.69
LINC00339-203ENST00000420503 A4GNTQ9UNA3 340 aa10.74□□□□□ -0.69
LINC00339-203ENST00000420503 MED31Q9Y3C7 131 aa10.74□□□□□ -0.69
LINC00339-203ENST00000420503 NPIPB13A6NJU9 1138 aa10.73□□□□□ -0.69
LINC00339-203ENST00000420503 NPIPB4C9JG80 1138 aa10.73□□□□□ -0.69
LINC00339-203ENST00000420503 KNG1P01042 644 aa10.73□□□□□ -0.69
LINC00339-203ENST00000420503 HLA-DPB1P04440 258 aa10.73□□□□□ -0.69
LINC00339-203ENST00000420503 CTLA4P16410 223 aa10.73□□□□□ -0.69
LINC00339-203ENST00000420503 TNFRSF1AP19438 455 aa10.73□□□□□ -0.69
LINC00339-203ENST00000420503 GSTM3P21266 225 aa10.73□□□□□ -0.69
LINC00339-203ENST00000420503 ANOS1P23352 680 aa10.73□□□□□ -0.69
LINC00339-203ENST00000420503 MTNR1AP48039 350 aa10.73□□□□□ -0.69
LINC00339-203ENST00000420503 CCDC92Q53HC0 331 aaPredicted RBP10.73□□□□□ -0.69
LINC00339-203ENST00000420503 MESTQ5EB52 335 aa10.73□□□□□ -0.69
LINC00339-203ENST00000420503 ZMAT1Q5H9K5 638 aa10.73□□□□□ -0.69
LINC00339-203ENST00000420503 NANOGP8Q6NSW7 305 aa10.73□□□□□ -0.69
LINC00339-203ENST00000420503 CGB2Q6NT52 195 aa10.73□□□□□ -0.69
LINC00339-203ENST00000420503 TBPL2Q6SJ96 375 aa10.73□□□□□ -0.69
LINC00339-203ENST00000420503 CALHM3Q86XJ0 350 aa10.73□□□□□ -0.69
LINC00339-203ENST00000420503 SLC30A8Q8IWU4 369 aa10.73□□□□□ -0.69
LINC00339-203ENST00000420503 NRMQ8IXM6 262 aa10.73□□□□□ -0.69
LINC00339-203ENST00000420503 ALDH16A1Q8IZ83 802 aa10.73□□□□□ -0.69
LINC00339-203ENST00000420503 ATG16L2Q8NAA4 619 aa10.73□□□□□ -0.69
LINC00339-203ENST00000420503 BHLHE23Q8NDY6 225 aa10.73□□□□□ -0.69
LINC00339-203ENST00000420503 RAB40AQ8WXH6 277 aa10.73□□□□□ -0.69
LINC00339-203ENST00000420503 HAVCR1Q96D42 359 aa10.73□□□□□ -0.69
LINC00339-203ENST00000420503 BPIFA2Q96DR5 249 aa10.73□□□□□ -0.69
LINC00339-203ENST00000420503 Q96M85 177 aa10.73□□□□□ -0.69
LINC00339-203ENST00000420503 RBP7Q96R05 134 aa10.73□□□□□ -0.69
LINC00339-203ENST00000420503 TBCCD1Q9NVR7 557 aa10.73□□□□□ -0.69
LINC00339-203ENST00000420503 IL19Q9UHD0 177 aa10.73□□□□□ -0.69
LINC00339-203ENST00000420503 LRCH1Q9Y2L9 728 aa10.73□□□□□ -0.69
LINC00339-203ENST00000420503 SRRM5B3KS81 715 aa10.72□□□□□ -0.69
LINC00339-203ENST00000420503 CDC42EP2O14613 210 aa10.72□□□□□ -0.69
LINC00339-203ENST00000420503 FFAR1O14842 300 aa10.72□□□□□ -0.69
LINC00339-203ENST00000420503 RER1O15258 196 aa10.72□□□□□ -0.69
LINC00339-203ENST00000420503 SGCEO43556 437 aa10.72□□□□□ -0.69
LINC00339-203ENST00000420503 FCN3O75636 299 aa10.72□□□□□ -0.69
LINC00339-203ENST00000420503 TSPAN15O95858 294 aa10.72□□□□□ -0.69
LINC00339-203ENST00000420503 TNFSF4P23510 183 aa10.72□□□□□ -0.69
LINC00339-203ENST00000420503 GPR4P46093 362 aa10.72□□□□□ -0.69
LINC00339-203ENST00000420503 GNB2P62879 340 aa10.72□□□□□ -0.69
LINC00339-203ENST00000420503 SF3A3Q12874 501 aaKnown RBP eCLIP10.72□□□□□ -0.69
LINC00339-203ENST00000420503 LRRC23Q53EV4 343 aaPredicted RBP10.72□□□□□ -0.69
LINC00339-203ENST00000420503 CYBRD1Q53TN4 286 aa10.72□□□□□ -0.69
LINC00339-203ENST00000420503 SLC27A4Q6P1M0 643 aa10.72□□□□□ -0.69
LINC00339-203ENST00000420503 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.72□□□□□ -0.69
LINC00339-203ENST00000420503 FITM2Q8N6M3 262 aa10.72□□□□□ -0.69
LINC00339-203ENST00000420503 NPEPL1Q8NDH3 523 aa10.72□□□□□ -0.69
LINC00339-203ENST00000420503 C10orf82Q8WW14 230 aa10.72□□□□□ -0.69
LINC00339-203ENST00000420503 RASD2Q96D21 266 aa10.72□□□□□ -0.69
LINC00339-203ENST00000420503 CCT8L2Q96SF2 557 aa10.72□□□□□ -0.69
LINC00339-203ENST00000420503 CITED1Q99966 193 aa10.72□□□□□ -0.69
LINC00339-203ENST00000420503 NUDT16L1Q9BRJ7 211 aaKnown RBP10.72□□□□□ -0.69
LINC00339-203ENST00000420503 SIKE1Q9BRV8 207 aa10.72□□□□□ -0.69
LINC00339-203ENST00000420503 FGFR1OP2Q9NVK5 253 aa10.72□□□□□ -0.69
LINC00339-203ENST00000420503 STX18Q9P2W9 335 aaKnown RBP10.72□□□□□ -0.69
LINC00339-203ENST00000420503 CTSZQ9UBR2 303 aa10.72□□□□□ -0.69
LINC00339-203ENST00000420503 NDRG4Q9ULP0 352 aaKnown RBP10.72□□□□□ -0.69
LINC00339-203ENST00000420503 MMP24Q9Y5R2 645 aa10.72□□□□□ -0.69
LINC00339-203ENST00000420503 OR6C6A6NF89 314 aa10.71□□□□□ -0.69
LINC00339-203ENST00000420503 C12orf71A8MTZ7 269 aa10.71□□□□□ -0.69
LINC00339-203ENST00000420503 IGF2P01344 180 aa10.71□□□□□ -0.69
LINC00339-203ENST00000420503 MELTFP08582 738 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms