RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 CENPOQ9BU64 300 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 ZNF416Q9BWM5 594 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 SLITRK2Q9H156 845 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 C12orf49Q9H741 205 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 ELOVL3Q9HB03 270 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 CRLF2Q9HC73 371 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 GPR35Q9HC97 309 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 CENPMQ9NSP4 180 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 TXNL4BQ9NX01 149 aaKnown RBP5.26□□□□□ -1.57
HMGB3-202ENST00000419110 SLCO1C1Q9NYB5 712 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 MALT1Q9UDY8 824 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 CYB5R1Q9UHQ9 305 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 ATPIF1Q9UII2 106 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 ING1Q9UK53 422 aaPredicted RBP5.26□□□□□ -1.57
HMGB3-202ENST00000419110 CLEC4AQ9UMR7 237 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 ZNF281Q9Y2X9 895 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 LHFPL6Q9Y693 200 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 R4GMQ9 66 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 DCHS1Q96JQ0 3298 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 CHD8Q9HCK8 2581 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 SHANK1Q9Y566 2161 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 ARPC4-TTLL3A0A0A6YYG9 625 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 A0A1B0GTH9 108 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 LOC107986453A0A1B0GWG9 222 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 TRIM64BA6NI03 449 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 PRR32B1ATL7 298 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 C1QTNF9BB2RNN3 333 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 OGG1O15527 345 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 UPK3AO75631 287 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 GPX5O75715 221 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 GATBO75879 557 aaKnown RBP5.25□□□□□ -1.57
HMGB3-202ENST00000419110 CLPXO76031 633 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 MPZL1O95297 269 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 IL1AP01583 271 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 C1QTNF9P0C862 333 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 ZNF182P17025 639 aaPredicted RBP5.25□□□□□ -1.57
HMGB3-202ENST00000419110 ACHEP22303 614 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 CFL1P23528 166 aaKnown RBP5.25□□□□□ -1.57
HMGB3-202ENST00000419110 CALRP27797 417 aaKnown RBP5.25□□□□□ -1.57
HMGB3-202ENST00000419110 PCSK6P29122 969 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 CDAP32320 146 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 DCTDP32321 178 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 PEX19P40855 299 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 OPRL1P41146 370 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 CRYBB2P43320 205 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 OR3A2P47893 321 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 HTR5AP47898 357 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 SLC6A9P48067 706 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 CX3CR1P49238 355 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 MTNR1BP49286 362 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 CCR9P51686 369 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 HCCSP53701 268 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 FABP5Q01469 135 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 MFGE8Q08431 387 aaPredicted RBP5.25□□□□□ -1.57
HMGB3-202ENST00000419110 ECH1Q13011 328 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 HNRNPA0Q13151 305 aaKnown RBP5.25□□□□□ -1.57
HMGB3-202ENST00000419110 ENDOGQ14249 297 aaKnown RBP5.25□□□□□ -1.57
HMGB3-202ENST00000419110 SLC36A2Q495M3 483 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 HSD17B12Q53GQ0 312 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 KRTCAP3Q53RY4 240 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 WDR38Q5JTN6 314 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 PHYHD1Q5SRE7 291 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 ZNF684Q5T5D7 378 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 TSPO2Q5TGU0 170 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 OTPQ5XKR4 325 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 NSUN5P2Q63ZY6 315 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 TMEM53Q6P2H8 277 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 ZNF585AQ6P3V2 769 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 FDX2Q6P4F2 183 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 LRFN4Q6PJG9 635 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 CORO6Q6QEF8 472 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 ZNF704Q6ZNC4 412 aaPredicted RBP5.25□□□□□ -1.57
HMGB3-202ENST00000419110 RHOUQ7L0Q8 258 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 SLC16A14Q7RTX9 510 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.25□□□□□ -1.57
HMGB3-202ENST00000419110 DPPA2Q7Z7J5 298 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 ADGRE4PQ86SQ3 457 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 TUSC5Q8IXB3 177 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 GCNT2Q8N0V5 402 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 ZNF283Q8N7M2 679 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 CNEP1R1Q8N9A8 125 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 OR5M9Q8NGP3 310 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 OR2G2Q8NGZ5 317 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 MCFD2Q8NI22 146 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 DYNC2LI1Q8TCX1 351 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 GPR148Q8TDV2 347 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 PHYHIPQ92561 330 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 GHSRQ92847 366 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 SPTSSAQ969W0 71 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 AMELYQ99218 206 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 WACQ9BTA9 647 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 TP63Q9H3D4 680 aaPredicted RBP5.25□□□□□ -1.57
HMGB3-202ENST00000419110 SIAEQ9HAT2 523 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 PLEKHA1Q9HB21 404 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 SMURF1Q9HCE7 757 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 ZNF71Q9NQZ8 489 aaPredicted RBP5.25□□□□□ -1.57
HMGB3-202ENST00000419110 DDX28Q9NUL7 540 aaKnown RBP5.25□□□□□ -1.57
HMGB3-202ENST00000419110 PLEK2Q9NYT0 353 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 CKLFQ9UBR5 152 aa5.25□□□□□ -1.57
HMGB3-202ENST00000419110 MAP1BP46821 2468 aaKnown RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms