RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 RP2O75695 350 aa17.59■□□□□ 0.41
PKNOX1-202ENST00000418336 TACSTD2P09758 323 aa17.59■□□□□ 0.41
PKNOX1-202ENST00000418336 GUCA1AP43080 201 aaPredicted RBP17.59■□□□□ 0.41
PKNOX1-202ENST00000418336 COX10Q12887 443 aa17.59■□□□□ 0.41
PKNOX1-202ENST00000418336 GK3PQ14409 553 aa17.59■□□□□ 0.41
PKNOX1-202ENST00000418336 RPL13AP3Q6NVV1 102 aa17.59■□□□□ 0.41
PKNOX1-202ENST00000418336 JAZF1Q86VZ6 243 aa17.59■□□□□ 0.41
PKNOX1-202ENST00000418336 UBASH3BQ8TF42 649 aa17.59■□□□□ 0.41
PKNOX1-202ENST00000418336 LRGUKQ96M69 825 aa17.59■□□□□ 0.41
PKNOX1-202ENST00000418336 RBM4Q9BWF3 364 aaKnown RBP17.59■□□□□ 0.41
PKNOX1-202ENST00000418336 PNRC2Q9NPJ4 139 aaKnown RBP17.59■□□□□ 0.41
PKNOX1-202ENST00000418336 HINT3Q9NQE9 182 aaKnown RBP17.59■□□□□ 0.41
PKNOX1-202ENST00000418336 ARMC1Q9NVT9 282 aa17.59■□□□□ 0.41
PKNOX1-202ENST00000418336 ATPIF1Q9UII2 106 aa17.59■□□□□ 0.41
PKNOX1-202ENST00000418336 NDRG4Q9ULP0 352 aaKnown RBP17.59■□□□□ 0.41
PKNOX1-202ENST00000418336 MALRD1Q5VYJ5 2156 aa17.58■□□□□ 0.4
PKNOX1-202ENST00000418336 A0A1W2PPW3 197 aa17.58■□□□□ 0.4
PKNOX1-202ENST00000418336 LILRA1O75019 489 aa17.58■□□□□ 0.4
PKNOX1-202ENST00000418336 CST1P01037 141 aa17.58■□□□□ 0.4
PKNOX1-202ENST00000418336 DBHP09172 617 aa17.58■□□□□ 0.4
PKNOX1-202ENST00000418336 HTR5AP47898 357 aa17.58■□□□□ 0.4
PKNOX1-202ENST00000418336 PPP1CBP62140 327 aa17.58■□□□□ 0.4
PKNOX1-202ENST00000418336 C6orf52Q5T4I8 152 aa17.58■□□□□ 0.4
PKNOX1-202ENST00000418336 SLC18B1Q6NT16 456 aa17.58■□□□□ 0.4
PKNOX1-202ENST00000418336 CORO6Q6QEF8 472 aa17.58■□□□□ 0.4
PKNOX1-202ENST00000418336 SLC37A3Q8NCC5 494 aa17.58■□□□□ 0.4
PKNOX1-202ENST00000418336 OR10G2Q8NGC3 310 aa17.58■□□□□ 0.4
PKNOX1-202ENST00000418336 ABHD4Q8TB40 342 aa17.58■□□□□ 0.4
PKNOX1-202ENST00000418336 TBCCD1Q9NVR7 557 aa17.58■□□□□ 0.4
PKNOX1-202ENST00000418336 NKIRAS2Q9NYR9 191 aa17.58■□□□□ 0.4
PKNOX1-202ENST00000418336 H3BSA7 217 aa17.57■□□□□ 0.4
PKNOX1-202ENST00000418336 SOX14O95416 240 aa17.57■□□□□ 0.4
PKNOX1-202ENST00000418336 RENP00797 406 aa17.57■□□□□ 0.4
PKNOX1-202ENST00000418336 IL2RGP31785 369 aa17.57■□□□□ 0.4
PKNOX1-202ENST00000418336 MRPS11P82912 194 aaKnown RBP17.57■□□□□ 0.4
PKNOX1-202ENST00000418336 TEKQ02763 1124 aa17.57■□□□□ 0.4
PKNOX1-202ENST00000418336 FLOT2Q14254 428 aa17.57■□□□□ 0.4
PKNOX1-202ENST00000418336 TRIP10Q15642 601 aa17.57■□□□□ 0.4
PKNOX1-202ENST00000418336 DNM1P34Q6PK57 102 aa17.57■□□□□ 0.4
PKNOX1-202ENST00000418336 LYPD4Q6UWN0 246 aa17.57■□□□□ 0.4
PKNOX1-202ENST00000418336 CFAP77Q6ZQR2 320 aa17.57■□□□□ 0.4
PKNOX1-202ENST00000418336 PRIMA1Q86XR5 153 aa17.57■□□□□ 0.4
PKNOX1-202ENST00000418336 HS3ST5Q8IZT8 346 aa17.57■□□□□ 0.4
PKNOX1-202ENST00000418336 CYB561A3Q8NBI2 242 aa17.57■□□□□ 0.4
PKNOX1-202ENST00000418336 OR10S1Q8NGN2 331 aa17.57■□□□□ 0.4
PKNOX1-202ENST00000418336 OR1F12Q8NHA8 337 aa17.57■□□□□ 0.4
PKNOX1-202ENST00000418336 FEVQ99581 238 aa17.57■□□□□ 0.4
PKNOX1-202ENST00000418336 NTN4Q9HB63 628 aa17.57■□□□□ 0.4
PKNOX1-202ENST00000418336 SLCO1C1Q9NYB5 712 aa17.57■□□□□ 0.4
PKNOX1-202ENST00000418336 PLEK2Q9NYT0 353 aa17.57■□□□□ 0.4
PKNOX1-202ENST00000418336 EIF3KQ9UBQ5 218 aaKnown RBP17.57■□□□□ 0.4
PKNOX1-202ENST00000418336 CYB5R1Q9UHQ9 305 aa17.57■□□□□ 0.4
PKNOX1-202ENST00000418336 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.56■□□□□ 0.4
PKNOX1-202ENST00000418336 JMJD1CQ15652 2540 aa17.56■□□□□ 0.4
PKNOX1-202ENST00000418336 ZSCAN5BA6NJL1 495 aa17.56■□□□□ 0.4
PKNOX1-202ENST00000418336 TLX2O43763 284 aaPredicted RBP17.56■□□□□ 0.4
PKNOX1-202ENST00000418336 FKBP6O75344 327 aa17.56■□□□□ 0.4
PKNOX1-202ENST00000418336 ADH4P08319 380 aa17.56■□□□□ 0.4
PKNOX1-202ENST00000418336 ZNF23P17027 643 aa17.56■□□□□ 0.4
PKNOX1-202ENST00000418336 GSTM3P21266 225 aa17.56■□□□□ 0.4
PKNOX1-202ENST00000418336 ANOS1P23352 680 aa17.56■□□□□ 0.4
PKNOX1-202ENST00000418336 NOS3P29474 1203 aa17.56■□□□□ 0.4
PKNOX1-202ENST00000418336 ERFP50548 548 aa17.56■□□□□ 0.4
PKNOX1-202ENST00000418336 GLO1Q04760 184 aa17.56■□□□□ 0.4
PKNOX1-202ENST00000418336 PSG7Q13046 419 aa17.56■□□□□ 0.4
PKNOX1-202ENST00000418336 GGTLC2Q14390 218 aa17.56■□□□□ 0.4
PKNOX1-202ENST00000418336 SPRNQ5BIV9 151 aa17.56■□□□□ 0.4
PKNOX1-202ENST00000418336 COLCA1Q6ZS62 124 aa17.56■□□□□ 0.4
PKNOX1-202ENST00000418336 C1orf174Q8IYL3 243 aa17.56■□□□□ 0.4
PKNOX1-202ENST00000418336 ICA1LQ8NDH6 482 aa17.56■□□□□ 0.4
PKNOX1-202ENST00000418336 OR52L1Q8NGH7 329 aa17.56■□□□□ 0.4
PKNOX1-202ENST00000418336 GIPC3Q8TF64 312 aa17.56■□□□□ 0.4
PKNOX1-202ENST00000418336 C1orf159Q96HA4 380 aa17.56■□□□□ 0.4
PKNOX1-202ENST00000418336 TSSK6Q9BXA6 273 aa17.56■□□□□ 0.4
PKNOX1-202ENST00000418336 STARD10Q9Y365 291 aa17.56■□□□□ 0.4
PKNOX1-202ENST00000418336 CRLF1O75462 422 aa17.55■□□□□ 0.4
PKNOX1-202ENST00000418336 IGHV1-46P01743 117 aa17.55■□□□□ 0.4
PKNOX1-202ENST00000418336 ERCC1P07992 297 aaPredicted RBP17.55■□□□□ 0.4
PKNOX1-202ENST00000418336 CRMP1Q14194 572 aa17.55■□□□□ 0.4
PKNOX1-202ENST00000418336 CARTPTQ16568 116 aa17.55■□□□□ 0.4
PKNOX1-202ENST00000418336 NKPD1Q17RQ9 610 aa17.55■□□□□ 0.4
PKNOX1-202ENST00000418336 ZNF718Q3SXZ3 478 aa17.55■□□□□ 0.4
PKNOX1-202ENST00000418336 LINC00346Q8IVM7 164 aa17.55■□□□□ 0.4
PKNOX1-202ENST00000418336 RDH5Q92781 318 aa17.55■□□□□ 0.4
PKNOX1-202ENST00000418336 MAP6Q96JE9 813 aa17.55■□□□□ 0.4
PKNOX1-202ENST00000418336 COQ7Q99807 217 aa17.55■□□□□ 0.4
PKNOX1-202ENST00000418336 ZNF275Q9NSD4 429 aaPredicted RBP17.55■□□□□ 0.4
PKNOX1-202ENST00000418336 TBC1D23Q9NUY8 699 aa17.55■□□□□ 0.4
PKNOX1-202ENST00000418336 LRP5LA4QPB2 252 aa17.54■□□□□ 0.4
PKNOX1-202ENST00000418336 ABHD16AO95870 558 aa17.54■□□□□ 0.4
PKNOX1-202ENST00000418336 CLUP10909 449 aa17.54■□□□□ 0.4
PKNOX1-202ENST00000418336 ACHEP22303 614 aa17.54■□□□□ 0.4
PKNOX1-202ENST00000418336 PYCR1P32322 319 aa17.54■□□□□ 0.4
PKNOX1-202ENST00000418336 PCK2Q16822 640 aa17.54■□□□□ 0.4
PKNOX1-202ENST00000418336 LINC01590Q5TEZ4 76 aa17.54■□□□□ 0.4
PKNOX1-202ENST00000418336 Q6ZR03 302 aa17.54■□□□□ 0.4
PKNOX1-202ENST00000418336 GJC3Q8NFK1 279 aa17.54■□□□□ 0.4
PKNOX1-202ENST00000418336 UTP4Q969X6 686 aaKnown RBP17.54■□□□□ 0.4
PKNOX1-202ENST00000418336 MSI2Q96DH6 328 aaKnown RBP17.54■□□□□ 0.4
PKNOX1-202ENST00000418336 HCAR1Q9BXC0 346 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms