RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 RIPPLY2Q5TAB7 128 aa14.92□□□□□ -0.02
CALD1-204ENST00000417172 KLHL24Q6TFL4 600 aa14.92□□□□□ -0.02
CALD1-204ENST00000417172 CATSPERDQ86XM0 798 aa14.92□□□□□ -0.02
CALD1-204ENST00000417172 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.92□□□□□ -0.02
CALD1-204ENST00000417172 ZNF676Q8N7Q3 588 aa14.92□□□□□ -0.02
CALD1-204ENST00000417172 FGFBP3Q8TAT2 258 aa14.92□□□□□ -0.02
CALD1-204ENST00000417172 SLC7A6Q92536 515 aa14.92□□□□□ -0.02
CALD1-204ENST00000417172 SLC25A46Q96AG3 418 aa14.92□□□□□ -0.02
CALD1-204ENST00000417172 SARAFQ96BY9 339 aa14.92□□□□□ -0.02
CALD1-204ENST00000417172 KCNN2Q9H2S1 579 aa14.92□□□□□ -0.02
CALD1-204ENST00000417172 B3GAT2Q9NPZ5 323 aa14.92□□□□□ -0.02
CALD1-204ENST00000417172 SLC5A6Q9Y289 635 aa14.92□□□□□ -0.02
CALD1-204ENST00000417172 R4GMQ9 66 aa14.92□□□□□ -0.02
CALD1-204ENST00000417172 TLN1Q9Y490 2541 aaKnown RBP14.92□□□□□ -0.02
CALD1-204ENST00000417172 ANKRD61A6NGH8 418 aa14.92□□□□□ -0.02
CALD1-204ENST00000417172 ZNF878C9JN71 531 aa14.92□□□□□ -0.02
CALD1-204ENST00000417172 PIN1P1O15428 100 aa14.92□□□□□ -0.02
CALD1-204ENST00000417172 GPRIN2O60269 458 aa14.92□□□□□ -0.02
CALD1-204ENST00000417172 CD1AP06126 327 aa14.92□□□□□ -0.02
CALD1-204ENST00000417172 SLC2A1P11166 492 aa14.92□□□□□ -0.02
CALD1-204ENST00000417172 PRKXP51817 358 aa14.92□□□□□ -0.02
CALD1-204ENST00000417172 OR10A3P58181 314 aa14.92□□□□□ -0.02
CALD1-204ENST00000417172 LINC00303Q3SY05 128 aa14.92□□□□□ -0.02
CALD1-204ENST00000417172 ZNF585AQ6P3V2 769 aa14.92□□□□□ -0.02
CALD1-204ENST00000417172 FDX2Q6P4F2 183 aa14.92□□□□□ -0.02
CALD1-204ENST00000417172 APH1AQ96BI3 265 aa14.92□□□□□ -0.02
CALD1-204ENST00000417172 DACH2Q96NX9 599 aa14.92□□□□□ -0.02
CALD1-204ENST00000417172 NOX4Q9NPH5 578 aa14.92□□□□□ -0.02
CALD1-204ENST00000417172 G6PC2Q9NQR9 355 aa14.92□□□□□ -0.02
CALD1-204ENST00000417172 ZNF175Q9Y473 711 aa14.92□□□□□ -0.02
CALD1-204ENST00000417172 TMEM269A0A1B0GVZ9 245 aa14.91□□□□□ -0.02
CALD1-204ENST00000417172 HSPB2A8KAH6 182 aa14.91□□□□□ -0.02
CALD1-204ENST00000417172 LOC110117498-PIK3R3F6TDL0 507 aa14.91□□□□□ -0.02
CALD1-204ENST00000417172 FAPQ12884 760 aa14.91□□□□□ -0.02
CALD1-204ENST00000417172 MRPL28Q13084 256 aaKnown RBP14.91□□□□□ -0.02
CALD1-204ENST00000417172 HSPB2Q16082 182 aa14.91□□□□□ -0.02
CALD1-204ENST00000417172 YIF1BQ5BJH7 314 aa14.91□□□□□ -0.02
CALD1-204ENST00000417172 FAM27BQ5VT28 67 aa14.91□□□□□ -0.02
CALD1-204ENST00000417172 RPUSD3Q6P087 351 aaKnown RBP14.91□□□□□ -0.02
CALD1-204ENST00000417172 UBE2J2Q8N2K1 259 aa14.91□□□□□ -0.02
CALD1-204ENST00000417172 C9orf106Q8NAJ2 232 aa14.91□□□□□ -0.02
CALD1-204ENST00000417172 NXF2Q9GZY0 626 aaKnown RBP14.91□□□□□ -0.02
CALD1-204ENST00000417172 SIAEQ9HAT2 523 aa14.91□□□□□ -0.02
CALD1-204ENST00000417172 PARPBPQ9NWS1 579 aa14.91□□□□□ -0.02
CALD1-204ENST00000417172 FAM206AQ9NX38 181 aa14.91□□□□□ -0.02
CALD1-204ENST00000417172 PLEKHB1Q9UF11 243 aaPredicted RBP14.91□□□□□ -0.02
CALD1-204ENST00000417172 N6AMT1Q9Y5N5 214 aa14.91□□□□□ -0.02
CALD1-204ENST00000417172 TMEM212A6NML5 194 aa14.9□□□□□ -0.02
CALD1-204ENST00000417172 ZNF879B4DU55 563 aa14.9□□□□□ -0.02
CALD1-204ENST00000417172 ZNF254O75437 659 aa14.9□□□□□ -0.02
CALD1-204ENST00000417172 INHBBP09529 407 aa14.9□□□□□ -0.02
CALD1-204ENST00000417172 SOX6P35712 828 aa14.9□□□□□ -0.02
CALD1-204ENST00000417172 RORCP51449 518 aa14.9□□□□□ -0.02
CALD1-204ENST00000417172 UCNP55089 124 aa14.9□□□□□ -0.02
CALD1-204ENST00000417172 CCDC92Q53HC0 331 aaPredicted RBP14.9□□□□□ -0.02
CALD1-204ENST00000417172 DEGS2Q6QHC5 323 aa14.9□□□□□ -0.02
CALD1-204ENST00000417172 ZNF100Q8IYN0 542 aa14.9□□□□□ -0.02
CALD1-204ENST00000417172 SLC22A24Q8N4F4 322 aa14.9□□□□□ -0.02
CALD1-204ENST00000417172 OR6Q1Q8NGQ2 317 aa14.9□□□□□ -0.02
CALD1-204ENST00000417172 GPR137Q96N19 417 aa14.9□□□□□ -0.02
CALD1-204ENST00000417172 MED18Q9BUE0 208 aa14.9□□□□□ -0.02
CALD1-204ENST00000417172 LINC00470Q9BZP3 86 aa14.9□□□□□ -0.02
CALD1-204ENST00000417172 COMMD4Q9H0A8 199 aa14.9□□□□□ -0.02
CALD1-204ENST00000417172 SLC25A18Q9H1K4 315 aa14.9□□□□□ -0.02
CALD1-204ENST00000417172 OR52A1Q9UKL2 312 aa14.9□□□□□ -0.02
CALD1-204ENST00000417172 INTS1Q8N201 2190 aaKnown RBP14.9□□□□□ -0.02
CALD1-204ENST00000417172 A0A096LPE4 126 aa14.9□□□□□ -0.02
CALD1-204ENST00000417172 A0A1W2PPZ6 126 aa14.9□□□□□ -0.02
CALD1-204ENST00000417172 C5orf63A6NC05 138 aa14.9□□□□□ -0.02
CALD1-204ENST00000417172 CTDSP2O14595 271 aa14.9□□□□□ -0.02
CALD1-204ENST00000417172 SERPINA3P01011 423 aa14.9□□□□□ -0.02
CALD1-204ENST00000417172 OCM2P0CE71 109 aa14.9□□□□□ -0.02
CALD1-204ENST00000417172 FCGR2AP12318 317 aa14.9□□□□□ -0.02
CALD1-204ENST00000417172 HSD11B1P28845 292 aa14.9□□□□□ -0.02
CALD1-204ENST00000417172 ARF1P84077 181 aaKnown RBP14.9□□□□□ -0.02
CALD1-204ENST00000417172 GALK2Q01415 458 aa14.9□□□□□ -0.02
CALD1-204ENST00000417172 TAF13Q15543 124 aa14.9□□□□□ -0.02
CALD1-204ENST00000417172 ACSF3Q4G176 576 aaPredicted RBP14.9□□□□□ -0.02
CALD1-204ENST00000417172 PRR30Q53SZ7 412 aaPredicted RBP14.9□□□□□ -0.02
CALD1-204ENST00000417172 UNQ9370/PRO34162Q6UXP9 181 aa14.9□□□□□ -0.02
CALD1-204ENST00000417172 ZNF813Q6ZN06 617 aa14.9□□□□□ -0.02
CALD1-204ENST00000417172 NAA40Q86UY6 237 aa14.9□□□□□ -0.02
CALD1-204ENST00000417172 SKA3Q8IX90 412 aa14.9□□□□□ -0.02
CALD1-204ENST00000417172 CISD2Q8N5K1 135 aaKnown RBP14.9□□□□□ -0.02
CALD1-204ENST00000417172 FAM122AQ96E09 287 aa14.9□□□□□ -0.02
CALD1-204ENST00000417172 DERL3Q96Q80 235 aa14.9□□□□□ -0.02
CALD1-204ENST00000417172 ZGRF1Q86YA3 2104 aa14.89□□□□□ -0.03
CALD1-204ENST00000417172 ZNF587BE7ETH6 402 aa14.89□□□□□ -0.03
CALD1-204ENST00000417172 DBHP09172 617 aa14.89□□□□□ -0.03
CALD1-204ENST00000417172 UCHL1P09936 223 aa14.89□□□□□ -0.03
CALD1-204ENST00000417172 NPR2P20594 1047 aa14.89□□□□□ -0.03
CALD1-204ENST00000417172 SH3BGRP55822 239 aaPredicted RBP14.89□□□□□ -0.03
CALD1-204ENST00000417172 FAM180AQ6UWF9 173 aa14.89□□□□□ -0.03
CALD1-204ENST00000417172 UNQ6494/PRO21346Q6UXR6 183 aa14.89□□□□□ -0.03
CALD1-204ENST00000417172 GJC3Q8NFK1 279 aa14.89□□□□□ -0.03
CALD1-204ENST00000417172 HAVCR2Q8TDQ0 301 aa14.89□□□□□ -0.03
CALD1-204ENST00000417172 GMPPAQ96IJ6 420 aaPredicted RBP14.89□□□□□ -0.03
CALD1-204ENST00000417172 UPB1Q9UBR1 384 aa14.89□□□□□ -0.03
CALD1-204ENST00000417172 TRBV5-5A0A0J9YX44 114 aa14.88□□□□□ -0.03
CALD1-204ENST00000417172 LMX1BO60663 402 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms