RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 POLQO75417 2590 aa19.92■□□□□ 0.78
SMARCB1-205ENST00000417137 RAI1Q7Z5J4 1906 aaPredicted RBP19.92■□□□□ 0.78
SMARCB1-205ENST00000417137 TACC2O95359 2948 aa19.92■□□□□ 0.78
SMARCB1-205ENST00000417137 OR6C6A6NF89 314 aa19.91■□□□□ 0.78
SMARCB1-205ENST00000417137 ZNF593O00488 134 aaPredicted RBP19.91■□□□□ 0.78
SMARCB1-205ENST00000417137 SYNGR3O43761 229 aa19.91■□□□□ 0.78
SMARCB1-205ENST00000417137 LCKP06239 509 aa19.91■□□□□ 0.78
SMARCB1-205ENST00000417137 FAM157BP0CG42 384 aa19.91■□□□□ 0.78
SMARCB1-205ENST00000417137 SELENOVP59797 346 aa19.91■□□□□ 0.78
SMARCB1-205ENST00000417137 SNRPD2P62316 118 aaKnown RBP19.91■□□□□ 0.78
SMARCB1-205ENST00000417137 ECH1Q13011 328 aa19.91■□□□□ 0.78
SMARCB1-205ENST00000417137 KLHL12Q53G59 568 aa19.91■□□□□ 0.78
SMARCB1-205ENST00000417137 TEX30Q5JUR7 227 aa19.91■□□□□ 0.78
SMARCB1-205ENST00000417137 LINC01590Q5TEZ4 76 aa19.91■□□□□ 0.78
SMARCB1-205ENST00000417137 C12orf73Q69YU5 71 aa19.91■□□□□ 0.78
SMARCB1-205ENST00000417137 RGS7BPQ6MZT1 257 aaPredicted RBP19.91■□□□□ 0.78
SMARCB1-205ENST00000417137 LINC00346Q8IVM7 164 aa19.91■□□□□ 0.78
SMARCB1-205ENST00000417137 C4orf45Q96LM5 186 aa19.91■□□□□ 0.78
SMARCB1-205ENST00000417137 DCLRE1CQ96SD1 692 aaKnown RBP19.91■□□□□ 0.78
SMARCB1-205ENST00000417137 PITX2Q99697 317 aa19.91■□□□□ 0.78
SMARCB1-205ENST00000417137 COQ7Q99807 217 aa19.91■□□□□ 0.78
SMARCB1-205ENST00000417137 CXXC4Q9H2H0 198 aa19.91■□□□□ 0.78
SMARCB1-205ENST00000417137 PLK3Q9H4B4 646 aa19.91■□□□□ 0.78
SMARCB1-205ENST00000417137 H2AFY2Q9P0M6 372 aaPredicted RBP19.91■□□□□ 0.78
SMARCB1-205ENST00000417137 COMMD3-BMI1R4GMX3 469 aa19.91■□□□□ 0.78
SMARCB1-205ENST00000417137 TLX2O43763 284 aaPredicted RBP19.9■□□□□ 0.78
SMARCB1-205ENST00000417137 GPRIN2O60269 458 aa19.9■□□□□ 0.78
SMARCB1-205ENST00000417137 EPHA2P29317 976 aa19.9■□□□□ 0.78
SMARCB1-205ENST00000417137 PTH2RP49190 550 aa19.9■□□□□ 0.78
SMARCB1-205ENST00000417137 EVX1P49640 407 aa19.9■□□□□ 0.78
SMARCB1-205ENST00000417137 RPS7P62081 194 aaKnown RBP19.9■□□□□ 0.78
SMARCB1-205ENST00000417137 SWI5Q1ZZU3 235 aa19.9■□□□□ 0.78
SMARCB1-205ENST00000417137 MST1LQ2TV78 715 aa19.9■□□□□ 0.78
SMARCB1-205ENST00000417137 C11orf71Q6IPW1 123 aa19.9■□□□□ 0.78
SMARCB1-205ENST00000417137 MRPL24Q96A35 216 aaKnown RBP19.9■□□□□ 0.78
SMARCB1-205ENST00000417137 INTS14Q96SY0 518 aa19.9■□□□□ 0.78
SMARCB1-205ENST00000417137 WDR76Q9H967 626 aa19.9■□□□□ 0.78
SMARCB1-205ENST00000417137 PDZD2O15018 2839 aa19.9■□□□□ 0.78
SMARCB1-205ENST00000417137 DSCAMO60469 2012 aa19.9■□□□□ 0.78
SMARCB1-205ENST00000417137 ICMTO60725 284 aa19.89■□□□□ 0.77
SMARCB1-205ENST00000417137 ABHD16AO95870 558 aa19.89■□□□□ 0.77
SMARCB1-205ENST00000417137 SPARCP09486 303 aa19.89■□□□□ 0.77
SMARCB1-205ENST00000417137 ANPEPP15144 967 aa19.89■□□□□ 0.77
SMARCB1-205ENST00000417137 TUBG1P23258 451 aa19.89■□□□□ 0.77
SMARCB1-205ENST00000417137 POLR2IP36954 125 aaKnown RBP19.89■□□□□ 0.77
SMARCB1-205ENST00000417137 CDKN1AP38936 164 aa19.89■□□□□ 0.77
SMARCB1-205ENST00000417137 RCN1Q15293 331 aa19.89■□□□□ 0.77
SMARCB1-205ENST00000417137 PCK2Q16822 640 aa19.89■□□□□ 0.77
SMARCB1-205ENST00000417137 TMEM154Q6P9G4 183 aa19.89■□□□□ 0.77
SMARCB1-205ENST00000417137 SHFQ7M4L6 423 aa19.89■□□□□ 0.77
SMARCB1-205ENST00000417137 TCEANCQ8N8B7 351 aa19.89■□□□□ 0.77
SMARCB1-205ENST00000417137 OR1J1Q8NGS3 322 aa19.89■□□□□ 0.77
SMARCB1-205ENST00000417137 PERPQ96FX8 193 aa19.89■□□□□ 0.77
SMARCB1-205ENST00000417137 CACNG6Q9BXT2 260 aa19.89■□□□□ 0.77
SMARCB1-205ENST00000417137 OR51B6Q9H340 312 aa19.89■□□□□ 0.77
SMARCB1-205ENST00000417137 TUBG2Q9NRH3 451 aa19.89■□□□□ 0.77
SMARCB1-205ENST00000417137 TBCCD1Q9NVR7 557 aa19.89■□□□□ 0.77
SMARCB1-205ENST00000417137 GRIP1Q9Y3R0 1128 aa19.89■□□□□ 0.77
SMARCB1-205ENST00000417137 PRKYO43930 277 aa19.88■□□□□ 0.77
SMARCB1-205ENST00000417137 WNT5AP41221 380 aa19.88■□□□□ 0.77
SMARCB1-205ENST00000417137 RGS6P49758 472 aa19.88■□□□□ 0.77
SMARCB1-205ENST00000417137 ATP5J2P56134 94 aa19.88■□□□□ 0.77
SMARCB1-205ENST00000417137 CDC42P60953 191 aa19.88■□□□□ 0.77
SMARCB1-205ENST00000417137 LCN1P1Q5VSP4 162 aa19.88■□□□□ 0.77
SMARCB1-205ENST00000417137 SHEQ5VZ18 495 aa19.88■□□□□ 0.77
SMARCB1-205ENST00000417137 LYPD4Q6UWN0 246 aa19.88■□□□□ 0.77
SMARCB1-205ENST00000417137 CFAP77Q6ZQR2 320 aa19.88■□□□□ 0.77
SMARCB1-205ENST00000417137 ERI1Q8IV48 349 aaKnown RBP19.88■□□□□ 0.77
SMARCB1-205ENST00000417137 TMEM163Q8TC26 289 aa19.88■□□□□ 0.77
SMARCB1-205ENST00000417137 ZMYND19Q96E35 227 aaPredicted RBP19.88■□□□□ 0.77
SMARCB1-205ENST00000417137 COG8Q96MW5 612 aa19.88■□□□□ 0.77
SMARCB1-205ENST00000417137 ATF6BQ99941 703 aa19.88■□□□□ 0.77
SMARCB1-205ENST00000417137 MARCH7Q9H992 704 aa19.88■□□□□ 0.77
SMARCB1-205ENST00000417137 H7C417 338 aa19.87■□□□□ 0.77
SMARCB1-205ENST00000417137 EFNB1P98172 346 aa19.87■□□□□ 0.77
SMARCB1-205ENST00000417137 APOFQ13790 326 aa19.87■□□□□ 0.77
SMARCB1-205ENST00000417137 MOGQ16653 247 aa19.87■□□□□ 0.77
SMARCB1-205ENST00000417137 ZNF718Q3SXZ3 478 aa19.87■□□□□ 0.77
SMARCB1-205ENST00000417137 DCXRQ7Z4W1 244 aa19.87■□□□□ 0.77
SMARCB1-205ENST00000417137 BBS1Q8NFJ9 593 aa19.87■□□□□ 0.77
SMARCB1-205ENST00000417137 OR6N2Q8NGY6 317 aa19.87■□□□□ 0.77
SMARCB1-205ENST00000417137 ABHD4Q8TB40 342 aa19.87■□□□□ 0.77
SMARCB1-205ENST00000417137 SYNPRQ8TBG9 265 aa19.87■□□□□ 0.77
SMARCB1-205ENST00000417137 TEAD3Q99594 435 aa19.87■□□□□ 0.77
SMARCB1-205ENST00000417137 SLC29A1Q99808 456 aa19.87■□□□□ 0.77
SMARCB1-205ENST00000417137 BARX1Q9HBU1 254 aaPredicted RBP19.87■□□□□ 0.77
SMARCB1-205ENST00000417137 C8orf4Q9NR00 106 aa19.87■□□□□ 0.77
SMARCB1-205ENST00000417137 DUSP13Q9UII6 198 aa19.87■□□□□ 0.77
SMARCB1-205ENST00000417137 GPR160Q9UJ42 338 aa19.87■□□□□ 0.77
SMARCB1-205ENST00000417137 J3QW42 95 aa19.86■□□□□ 0.77
SMARCB1-205ENST00000417137 ZNF250P15622 560 aa19.86■□□□□ 0.77
SMARCB1-205ENST00000417137 SLC2A5P22732 501 aa19.86■□□□□ 0.77
SMARCB1-205ENST00000417137 GCH1P30793 250 aa19.86■□□□□ 0.77
SMARCB1-205ENST00000417137 RPS27P42677 84 aaKnown RBP19.86■□□□□ 0.77
SMARCB1-205ENST00000417137 PPP1CBP62140 327 aa19.86■□□□□ 0.77
SMARCB1-205ENST00000417137 TESK1Q15569 626 aa19.86■□□□□ 0.77
SMARCB1-205ENST00000417137 ZIK1Q3SY52 487 aaPredicted RBP19.86■□□□□ 0.77
SMARCB1-205ENST00000417137 NXNL2Q5VZ03 156 aa19.86■□□□□ 0.77
SMARCB1-205ENST00000417137 PRSS57Q6UWY2 283 aa19.86■□□□□ 0.77
SMARCB1-205ENST00000417137 TIGD4Q8IY51 512 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms