RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 IL19Q9UHD0 177 aa12.47□□□□□ -0.41
RPS28-201ENST00000417088 PCDHGB1Q9Y5G3 927 aa12.47□□□□□ -0.41
RPS28-201ENST00000417088 INSIG2Q9Y5U4 225 aa12.47□□□□□ -0.41
RPS28-201ENST00000417088 PKD1L1Q8TDX9 2849 aa12.47□□□□□ -0.41
RPS28-201ENST00000417088 PRSS37A4D1T9 235 aa12.46□□□□□ -0.41
RPS28-201ENST00000417088 A8MXK9 166 aa12.46□□□□□ -0.41
RPS28-201ENST00000417088 AHCYL1O43865 530 aa12.46□□□□□ -0.41
RPS28-201ENST00000417088 CD14P08571 375 aa12.46□□□□□ -0.41
RPS28-201ENST00000417088 TROVE2P10155 538 aaKnown RBP eCLIP12.46□□□□□ -0.41
RPS28-201ENST00000417088 CTLA4P16410 223 aa12.46□□□□□ -0.41
RPS28-201ENST00000417088 PRTN3P24158 256 aa12.46□□□□□ -0.41
RPS28-201ENST00000417088 GPR4P46093 362 aa12.46□□□□□ -0.41
RPS28-201ENST00000417088 ZBED5Q49AG3 693 aa12.46□□□□□ -0.41
RPS28-201ENST00000417088 OTPQ5XKR4 325 aa12.46□□□□□ -0.41
RPS28-201ENST00000417088 CGB2Q6NT52 195 aa12.46□□□□□ -0.41
RPS28-201ENST00000417088 ZNF730Q6ZMV8 503 aa12.46□□□□□ -0.41
RPS28-201ENST00000417088 TMPRSS11FQ6ZWK6 438 aa12.46□□□□□ -0.41
RPS28-201ENST00000417088 MBOAT2Q6ZWT7 520 aa12.46□□□□□ -0.41
RPS28-201ENST00000417088 FAM122BQ7Z309 247 aa12.46□□□□□ -0.41
RPS28-201ENST00000417088 SLC7A6Q92536 515 aa12.46□□□□□ -0.41
RPS28-201ENST00000417088 PTP4A1Q93096 173 aa12.46□□□□□ -0.41
RPS28-201ENST00000417088 C1orf147Q96MC9 270 aaPredicted RBP12.46□□□□□ -0.41
RPS28-201ENST00000417088 DUX5Q96PT3 197 aa12.46□□□□□ -0.41
RPS28-201ENST00000417088 GPA33Q99795 319 aa12.46□□□□□ -0.41
RPS28-201ENST00000417088 C1QTNF5Q9BXJ0 243 aa12.46□□□□□ -0.41
RPS28-201ENST00000417088 PPP1R3CQ9UQK1 317 aa12.46□□□□□ -0.41
RPS28-201ENST00000417088 TRRAPQ9Y4A5 3859 aa12.45□□□□□ -0.42
RPS28-201ENST00000417088 TEX13CA0A0J9YWL9 993 aa12.45□□□□□ -0.42
RPS28-201ENST00000417088 DNAJC9-AS1A6NH13 148 aa12.45□□□□□ -0.42
RPS28-201ENST00000417088 TMEM178BH3BS89 294 aa12.45□□□□□ -0.42
RPS28-201ENST00000417088 XKRYO14609 159 aa12.45□□□□□ -0.42
RPS28-201ENST00000417088 SURF4O15260 269 aa12.45□□□□□ -0.42
RPS28-201ENST00000417088 TMPRSS2O15393 492 aa12.45□□□□□ -0.42
RPS28-201ENST00000417088 AQP6Q13520 282 aa12.45□□□□□ -0.42
RPS28-201ENST00000417088 C1orf94Q6P1W5 598 aa12.45□□□□□ -0.42
RPS28-201ENST00000417088 SLC15A3Q8IY34 581 aa12.45□□□□□ -0.42
RPS28-201ENST00000417088 RCN3Q96D15 328 aa12.45□□□□□ -0.42
RPS28-201ENST00000417088 COG8Q96MW5 612 aa12.45□□□□□ -0.42
RPS28-201ENST00000417088 ZNF48Q96MX3 618 aaPredicted RBP12.45□□□□□ -0.42
RPS28-201ENST00000417088 ZNF570Q96NI8 536 aa12.45□□□□□ -0.42
RPS28-201ENST00000417088 OR2V2Q96R30 315 aa12.45□□□□□ -0.42
RPS28-201ENST00000417088 MRI1Q9BV20 369 aa12.45□□□□□ -0.42
RPS28-201ENST00000417088 FGFR1OP2Q9NVK5 253 aa12.45□□□□□ -0.42
RPS28-201ENST00000417088 ASH2LQ9UBL3 628 aa12.45□□□□□ -0.42
RPS28-201ENST00000417088 OR6C6A6NF89 314 aa12.44□□□□□ -0.42
RPS28-201ENST00000417088 IMPA2O14732 288 aa12.44□□□□□ -0.42
RPS28-201ENST00000417088 SLC16A7O60669 478 aa12.44□□□□□ -0.42
RPS28-201ENST00000417088 ZNF682O95780 498 aa12.44□□□□□ -0.42
RPS28-201ENST00000417088 WNT2P09544 360 aa12.44□□□□□ -0.42
RPS28-201ENST00000417088 RAC2P15153 192 aa12.44□□□□□ -0.42
RPS28-201ENST00000417088 MDH2P40926 338 aaKnown RBP12.44□□□□□ -0.42
RPS28-201ENST00000417088 LSM6P62312 80 aaKnown RBP12.44□□□□□ -0.42
RPS28-201ENST00000417088 LIPEQ05469 1076 aa12.44□□□□□ -0.42
RPS28-201ENST00000417088 PAX8Q06710 450 aa12.44□□□□□ -0.42
RPS28-201ENST00000417088 IFI44LQ53G44 452 aa12.44□□□□□ -0.42
RPS28-201ENST00000417088 CCDC92Q53HC0 331 aaPredicted RBP12.44□□□□□ -0.42
RPS28-201ENST00000417088 ESCO2Q56NI9 601 aa12.44□□□□□ -0.42
RPS28-201ENST00000417088 PRR31Q5SQ13 230 aa12.44□□□□□ -0.42
RPS28-201ENST00000417088 SHISA2Q6UWI4 295 aa12.44□□□□□ -0.42
RPS28-201ENST00000417088 CBLL1Q75N03 491 aa12.44□□□□□ -0.42
RPS28-201ENST00000417088 TSEN54Q7Z6J9 526 aaKnown RBP12.44□□□□□ -0.42
RPS28-201ENST00000417088 OR5AS1Q8N127 324 aa12.44□□□□□ -0.42
RPS28-201ENST00000417088 POU5F2Q8N7G0 328 aa12.44□□□□□ -0.42
RPS28-201ENST00000417088 ATG16L2Q8NAA4 619 aa12.44□□□□□ -0.42
RPS28-201ENST00000417088 OR1F12Q8NHA8 337 aa12.44□□□□□ -0.42
RPS28-201ENST00000417088 RASD2Q96D21 266 aa12.44□□□□□ -0.42
RPS28-201ENST00000417088 GCM1Q9NP62 436 aa12.44□□□□□ -0.42
RPS28-201ENST00000417088 COA3Q9Y2R0 106 aaPredicted RBP12.44□□□□□ -0.42
RPS28-201ENST00000417088 AP3M1Q9Y2T2 418 aa12.44□□□□□ -0.42
RPS28-201ENST00000417088 CAPN7Q9Y6W3 813 aa12.44□□□□□ -0.42
RPS28-201ENST00000417088 CEACAM18A8MTB9 384 aa12.43□□□□□ -0.42
RPS28-201ENST00000417088 J3QW42 95 aa12.43□□□□□ -0.42
RPS28-201ENST00000417088 IFNL4K9M1U5 179 aa12.43□□□□□ -0.42
RPS28-201ENST00000417088 CXCR6O00574 342 aa12.43□□□□□ -0.42
RPS28-201ENST00000417088 KCNAB3O43448 404 aa12.43□□□□□ -0.42
RPS28-201ENST00000417088 PTP4A3O75365 173 aa12.43□□□□□ -0.42
RPS28-201ENST00000417088 KHDRBS3O75525 346 aaKnown RBP12.43□□□□□ -0.42
RPS28-201ENST00000417088 DBHP09172 617 aa12.43□□□□□ -0.42
RPS28-201ENST00000417088 CD80P33681 288 aa12.43□□□□□ -0.42
RPS28-201ENST00000417088 MMP16P51512 607 aa12.43□□□□□ -0.42
RPS28-201ENST00000417088 GUCY1A3Q02108 690 aa12.43□□□□□ -0.42
RPS28-201ENST00000417088 PAX2Q02962 417 aa12.43□□□□□ -0.42
RPS28-201ENST00000417088 BAMBIQ13145 260 aa12.43□□□□□ -0.42
RPS28-201ENST00000417088 KRR1Q13601 381 aaKnown RBP12.43□□□□□ -0.42
RPS28-201ENST00000417088 HLXQ14774 488 aaPredicted RBP12.43□□□□□ -0.42
RPS28-201ENST00000417088 FBXW12Q6X9E4 464 aa12.43□□□□□ -0.42
RPS28-201ENST00000417088 FKBP9P1Q75LS8 142 aa12.43□□□□□ -0.42
RPS28-201ENST00000417088 RRM2BQ7LG56 351 aa12.43□□□□□ -0.42
RPS28-201ENST00000417088 ARPINQ7Z6K5 226 aa12.43□□□□□ -0.42
RPS28-201ENST00000417088 GLB1L2Q8IW92 636 aa12.43□□□□□ -0.42
RPS28-201ENST00000417088 SLC7A13Q8TCU3 470 aa12.43□□□□□ -0.42
RPS28-201ENST00000417088 HSH2DQ96JZ2 352 aa12.43□□□□□ -0.42
RPS28-201ENST00000417088 SYT4Q9H2B2 425 aa12.43□□□□□ -0.42
RPS28-201ENST00000417088 ANKRD19PQ9H560 264 aa12.43□□□□□ -0.42
RPS28-201ENST00000417088 RERGLQ9H628 205 aa12.43□□□□□ -0.42
RPS28-201ENST00000417088 ZNF696Q9H7X3 374 aa12.43□□□□□ -0.42
RPS28-201ENST00000417088 ZMAT3Q9HA38 289 aaKnown RBP12.43□□□□□ -0.42
RPS28-201ENST00000417088 NMNAT1Q9HAN9 279 aaPredicted RBP12.43□□□□□ -0.42
RPS28-201ENST00000417088 TMEM165Q9HC07 324 aa12.43□□□□□ -0.42
RPS28-201ENST00000417088 NRIP3Q9NQ35 241 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms