RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 DNM1P46Q6ZS02 220 aa17.87■□□□□ 0.45
USP39-204ENST00000409766 UTS2BQ765I0 119 aa17.87■□□□□ 0.45
USP39-204ENST00000409766 TCTE3Q8IZS6 198 aa17.87■□□□□ 0.45
USP39-204ENST00000409766 FAM3DQ96BQ1 224 aa17.87■□□□□ 0.45
USP39-204ENST00000409766 GDF2Q9UK05 429 aaPredicted RBP17.87■□□□□ 0.45
USP39-204ENST00000409766 A0A0A6YYJ9 748 aa17.86■□□□□ 0.45
USP39-204ENST00000409766 C9orf172C9J069 976 aa17.86■□□□□ 0.45
USP39-204ENST00000409766 GLSO94925 669 aaPredicted RBP17.86■□□□□ 0.45
USP39-204ENST00000409766 ECDO95905 644 aaPredicted RBP17.86■□□□□ 0.45
USP39-204ENST00000409766 DHFRP00374 187 aa17.86■□□□□ 0.45
USP39-204ENST00000409766 QDPRP09417 244 aa17.86■□□□□ 0.45
USP39-204ENST00000409766 JMJD7P0C870 316 aa17.86■□□□□ 0.45
USP39-204ENST00000409766 PTHLHP12272 177 aa17.86■□□□□ 0.45
USP39-204ENST00000409766 EFNB2P52799 333 aa17.86■□□□□ 0.45
USP39-204ENST00000409766 KCNMB1Q16558 191 aa17.86■□□□□ 0.45
USP39-204ENST00000409766 C2orf76Q3KRA6 126 aa17.86■□□□□ 0.45
USP39-204ENST00000409766 B3GNTL1Q67FW5 361 aaPredicted RBP17.86■□□□□ 0.45
USP39-204ENST00000409766 SLC25A28Q96A46 364 aa17.86■□□□□ 0.45
USP39-204ENST00000409766 SCMH1Q96GD3 660 aa17.86■□□□□ 0.45
USP39-204ENST00000409766 RNF170Q96K19 258 aa17.86■□□□□ 0.45
USP39-204ENST00000409766 MCUBQ9NWR8 336 aa17.86■□□□□ 0.45
USP39-204ENST00000409766 RCE1Q9Y256 329 aa17.86■□□□□ 0.45
USP39-204ENST00000409766 LOC100289279A0A1B0GTE1 492 aa17.86■□□□□ 0.45
USP39-204ENST00000409766 C7orf66A4D0T2 115 aa17.86■□□□□ 0.45
USP39-204ENST00000409766 ACOT7O00154 380 aa17.86■□□□□ 0.45
USP39-204ENST00000409766 P2RY10O00398 339 aa17.86■□□□□ 0.45
USP39-204ENST00000409766 EIF1BO60739 113 aaKnown RBP17.86■□□□□ 0.45
USP39-204ENST00000409766 CTAG2O75638 210 aa17.86■□□□□ 0.45
USP39-204ENST00000409766 TTRP02766 147 aa17.86■□□□□ 0.45
USP39-204ENST00000409766 CLDN17P56750 224 aa17.86■□□□□ 0.45
USP39-204ENST00000409766 GLT8D1Q68CQ7 371 aa17.86■□□□□ 0.45
USP39-204ENST00000409766 RHOUQ7L0Q8 258 aa17.86■□□□□ 0.45
USP39-204ENST00000409766 AKAP1Q92667 903 aaKnown RBP eCLIP17.86■□□□□ 0.45
USP39-204ENST00000409766 LIN37Q96GY3 246 aaPredicted RBP17.86■□□□□ 0.45
USP39-204ENST00000409766 HRASLSQ9HDD0 168 aa17.86■□□□□ 0.45
USP39-204ENST00000409766 ZNF275Q9NSD4 429 aaPredicted RBP17.86■□□□□ 0.45
USP39-204ENST00000409766 MRPL15Q9P015 296 aaKnown RBP17.86■□□□□ 0.45
USP39-204ENST00000409766 CDV3Q9UKY7 258 aaKnown RBP17.86■□□□□ 0.45
USP39-204ENST00000409766 LMX1BO60663 402 aa17.85■□□□□ 0.45
USP39-204ENST00000409766 ACSM4P0C7M7 580 aa17.85■□□□□ 0.45
USP39-204ENST00000409766 DNASE1L1P49184 302 aa17.85■□□□□ 0.45
USP39-204ENST00000409766 AP3S2P59780 193 aa17.85■□□□□ 0.45
USP39-204ENST00000409766 RAC1P63000 192 aa17.85■□□□□ 0.45
USP39-204ENST00000409766 IFITM2Q01629 132 aa17.85■□□□□ 0.45
USP39-204ENST00000409766 KLHL24Q6TFL4 600 aa17.85■□□□□ 0.45
USP39-204ENST00000409766 BIVMQ86UB2 503 aa17.85■□□□□ 0.45
USP39-204ENST00000409766 NAXDQ8IW45 347 aa17.85■□□□□ 0.45
USP39-204ENST00000409766 ELMOD2Q8IZ81 293 aa17.85■□□□□ 0.45
USP39-204ENST00000409766 OR51A2Q8NGJ7 313 aa17.85■□□□□ 0.45
USP39-204ENST00000409766 PIGQQ9BRB3 760 aa17.85■□□□□ 0.45
USP39-204ENST00000409766 GHITMQ9H3K2 345 aa17.85■□□□□ 0.45
USP39-204ENST00000409766 P4HTMQ9NXG6 502 aa17.85■□□□□ 0.45
USP39-204ENST00000409766 KIAA1549Q9HCM3 1950 aa17.85■□□□□ 0.45
USP39-204ENST00000409766 A0A0G2JMM0 328 aa17.84■□□□□ 0.45
USP39-204ENST00000409766 A0A1W2PNU3 283 aaPredicted RBP17.84■□□□□ 0.45
USP39-204ENST00000409766 A0A1W2PPB8 328 aa17.84■□□□□ 0.45
USP39-204ENST00000409766 A0A1W2PRS3 328 aa17.84■□□□□ 0.45
USP39-204ENST00000409766 ANKRD20A5PA0PJZ0 165 aa17.84■□□□□ 0.45
USP39-204ENST00000409766 MEGF11A6BM72 1044 aa17.84■□□□□ 0.45
USP39-204ENST00000409766 KIR3DP1A8MWS1 328 aa17.84■□□□□ 0.45
USP39-204ENST00000409766 TLX3O43711 291 aaPredicted RBP17.84■□□□□ 0.45
USP39-204ENST00000409766 P04436 131 aa17.84■□□□□ 0.45
USP39-204ENST00000409766 ACER2Q5QJU3 275 aa17.84■□□□□ 0.45
USP39-204ENST00000409766 CDCP2Q5VXM1 449 aa17.84■□□□□ 0.45
USP39-204ENST00000409766 NCCRP1Q6ZVX7 275 aaPredicted RBP17.84■□□□□ 0.45
USP39-204ENST00000409766 CREB3L2Q70SY1 520 aa17.84■□□□□ 0.45
USP39-204ENST00000409766 BTN2A1Q7KYR7 527 aa17.84■□□□□ 0.45
USP39-204ENST00000409766 NOXA1Q86UR1 476 aa17.84■□□□□ 0.45
USP39-204ENST00000409766 OR2AJ1Q8NGZ0 328 aa17.84■□□□□ 0.45
USP39-204ENST00000409766 NKX3-1Q99801 234 aaPredicted RBP17.84■□□□□ 0.45
USP39-204ENST00000409766 PBOV1Q9GZY1 135 aa17.84■□□□□ 0.45
USP39-204ENST00000409766 SLC17A5Q9NRA2 495 aa17.84■□□□□ 0.45
USP39-204ENST00000409766 POLR1DQ9Y2S0 133 aa17.84■□□□□ 0.45
USP39-204ENST00000409766 GGT3PA6NGU5 568 aa17.84■□□□□ 0.45
USP39-204ENST00000409766 ZNF878C9JN71 531 aa17.84■□□□□ 0.45
USP39-204ENST00000409766 GMDSO60547 372 aa17.84■□□□□ 0.45
USP39-204ENST00000409766 VAMP5O95183 116 aa17.84■□□□□ 0.45
USP39-204ENST00000409766 SERPINA7P05543 415 aa17.84■□□□□ 0.45
USP39-204ENST00000409766 RAG2P55895 527 aa17.84■□□□□ 0.45
USP39-204ENST00000409766 CSNK2A1P68400 391 aaPredicted RBP17.84■□□□□ 0.45
USP39-204ENST00000409766 POU4F3Q15319 338 aa17.84■□□□□ 0.45
USP39-204ENST00000409766 TMEM255AQ5JRV8 349 aa17.84■□□□□ 0.45
USP39-204ENST00000409766 GLYATL3Q5SZD4 288 aa17.84■□□□□ 0.45
USP39-204ENST00000409766 CAPSLQ8WWF8 208 aa17.84■□□□□ 0.45
USP39-204ENST00000409766 UCN2Q96RP3 112 aa17.84■□□□□ 0.45
USP39-204ENST00000409766 TP63Q9H3D4 680 aaPredicted RBP17.84■□□□□ 0.45
USP39-204ENST00000409766 KCNK15Q9H427 330 aa17.84■□□□□ 0.45
USP39-204ENST00000409766 GLTPQ9NZD2 209 aa17.84■□□□□ 0.45
USP39-204ENST00000409766 ASH2LQ9UBL3 628 aa17.84■□□□□ 0.45
USP39-204ENST00000409766 NCKAP5O14513 1909 aa17.83■□□□□ 0.45
USP39-204ENST00000409766 IGHV3-15A0A0B4J1V0 119 aa17.83■□□□□ 0.45
USP39-204ENST00000409766 A0A0J9YW62 118 aa17.83■□□□□ 0.45
USP39-204ENST00000409766 CIB4A0PJX0 185 aa17.83■□□□□ 0.45
USP39-204ENST00000409766 HTR2CP28335 458 aa17.83■□□□□ 0.45
USP39-204ENST00000409766 B3GALT5-AS1P59052 145 aa17.83■□□□□ 0.45
USP39-204ENST00000409766 GABREP78334 506 aa17.83■□□□□ 0.45
USP39-204ENST00000409766 ING3Q9NXR8 418 aa17.83■□□□□ 0.45
USP39-204ENST00000409766 FOXJ2Q9P0K8 574 aa17.83■□□□□ 0.45
USP39-204ENST00000409766 MRPS18BQ9Y676 258 aaKnown RBP17.83■□□□□ 0.45
USP39-204ENST00000409766 DOCK10Q96BY6 2186 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms