RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 TRBV5-7A0A0A0MS05 114 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 FITM1A5D6W6 292 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 EFSO43281 561 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 UPK3AO75631 287 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 CSTBP04080 98 aaKnown RBP11.53□□□□□ -0.56
HERC3-203ENST00000407637 THBS1P07996 1170 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 CD70P32970 193 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 APLNRP35414 380 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 DHPSP49366 369 aaPredicted RBP11.53□□□□□ -0.56
HERC3-203ENST00000407637 HNRNPKP61978 463 aaKnown RBP eCLIP11.53□□□□□ -0.56
HERC3-203ENST00000407637 EIF5AP63241 154 aaKnown RBP11.53□□□□□ -0.56
HERC3-203ENST00000407637 LMAN2Q12907 356 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 FHL1Q13642 323 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 ZNF684Q5T5D7 378 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 MRPL2Q5T653 305 aaKnown RBP11.53□□□□□ -0.56
HERC3-203ENST00000407637 TMEM268Q5VZI3 342 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 OR2T2Q6IF00 324 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 ZNF676Q8N7Q3 588 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 PLPP7Q8NBV4 271 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 TMEM104Q8NE00 496 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 LYPD6BQ8NI32 183 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 BSCL2Q96G97 398 aaPredicted RBP11.53□□□□□ -0.56
HERC3-203ENST00000407637 MACROD1Q9BQ69 325 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 KLF16Q9BXK1 252 aaPredicted RBP11.53□□□□□ -0.56
HERC3-203ENST00000407637 RIMS4Q9H426 269 aaPredicted RBP11.53□□□□□ -0.56
HERC3-203ENST00000407637 PDE7BQ9NP56 450 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 KCNJ16Q9NPI9 418 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 IL36AQ9UHA7 158 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 MRM2Q9UI43 246 aaKnown RBP11.53□□□□□ -0.56
HERC3-203ENST00000407637 BRCA2P51587 3418 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 PRRC2BQ5JSZ5 2229 aaKnown RBP11.53□□□□□ -0.56
HERC3-203ENST00000407637 SMCO3A2RU48 225 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 ELOA3DA6NLF2 546 aaPredicted RBP11.53□□□□□ -0.56
HERC3-203ENST00000407637 TRGC2P03986 189 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 HOXC8P31273 242 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 TSPAN7P41732 249 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 S100A10P60903 97 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 CYCSP99999 105 aaKnown RBP11.53□□□□□ -0.56
HERC3-203ENST00000407637 ELOA3BQ3SY89 546 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 MOGAT2Q3SYC2 334 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 SLC22A6Q4U2R8 563 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 AKR1C8PQ5T2L2 129 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 LRRC18Q8N456 261 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 ZDHHC22Q8N966 263 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 NAXEQ8NCW5 288 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 ELOA3Q8NG57 546 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 DTD1Q8TEA8 209 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 GLYATL1Q969I3 302 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 NOL4LQ96MY1 436 aaPredicted RBP11.53□□□□□ -0.56
HERC3-203ENST00000407637 SPOCK3Q9BQ16 436 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 SNHG12Q9BXW3 62 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 AICDAQ9GZX7 198 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 SLC2A8Q9NY64 477 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 OR14J1Q9UGF5 321 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 SERTAD3Q9UJW9 196 aa11.53□□□□□ -0.56
HERC3-203ENST00000407637 SCN3AQ9NY46 2000 aa11.52□□□□□ -0.56
HERC3-203ENST00000407637 MYOFQ9NZM1 2061 aa11.52□□□□□ -0.56
HERC3-203ENST00000407637 A0A1W2PR48 441 aa11.52□□□□□ -0.57
HERC3-203ENST00000407637 ZNF432O94892 652 aa11.52□□□□□ -0.57
HERC3-203ENST00000407637 NGFRP08138 427 aa11.52□□□□□ -0.57
HERC3-203ENST00000407637 FGF7P21781 194 aa11.52□□□□□ -0.57
HERC3-203ENST00000407637 GNG10P50151 68 aa11.52□□□□□ -0.57
HERC3-203ENST00000407637 SLC7A9P82251 487 aa11.52□□□□□ -0.57
HERC3-203ENST00000407637 SMAD3P84022 425 aaKnown RBP11.52□□□□□ -0.57
HERC3-203ENST00000407637 RAB32Q13637 225 aa11.52□□□□□ -0.57
HERC3-203ENST00000407637 GXYLT1Q4G148 440 aa11.52□□□□□ -0.57
HERC3-203ENST00000407637 COL13A1Q5TAT6 717 aaPredicted RBP11.52□□□□□ -0.57
HERC3-203ENST00000407637 FAM46CQ5VWP2 391 aa11.52□□□□□ -0.57
HERC3-203ENST00000407637 LANCL3Q6ZV70 420 aa11.52□□□□□ -0.57
HERC3-203ENST00000407637 ZNF761Q86XN6 746 aaPredicted RBP11.52□□□□□ -0.57
HERC3-203ENST00000407637 FOXRED2Q8IWF2 684 aa11.52□□□□□ -0.57
HERC3-203ENST00000407637 TRAM1L1Q8N609 369 aa11.52□□□□□ -0.57
HERC3-203ENST00000407637 PCSK9Q8NBP7 692 aaKnown RBP11.52□□□□□ -0.57
HERC3-203ENST00000407637 TIFAQ96CG3 184 aa11.52□□□□□ -0.57
HERC3-203ENST00000407637 HIST1H2BLQ99880 126 aa11.52□□□□□ -0.57
HERC3-203ENST00000407637 WNT5BQ9H1J7 359 aa11.52□□□□□ -0.57
HERC3-203ENST00000407637 MARCH5Q9NX47 278 aa11.52□□□□□ -0.57
HERC3-203ENST00000407637 GOLT1BQ9Y3E0 138 aa11.52□□□□□ -0.57
HERC3-203ENST00000407637 TMED3Q9Y3Q3 217 aa11.52□□□□□ -0.57
HERC3-203ENST00000407637 SLCO1B1Q9Y6L6 691 aa11.52□□□□□ -0.57
HERC3-203ENST00000407637 TGIF2-C20orf24A0A0A6YYL0 155 aa11.52□□□□□ -0.57
HERC3-203ENST00000407637 A0A1B0GV50 99 aa11.52□□□□□ -0.57
HERC3-203ENST00000407637 C4orf47A7E2U8 309 aa11.52□□□□□ -0.57
HERC3-203ENST00000407637 C4orf51C9J302 202 aa11.52□□□□□ -0.57
HERC3-203ENST00000407637 C9J4A7 227 aa11.52□□□□□ -0.57
HERC3-203ENST00000407637 SPARCP09486 303 aa11.52□□□□□ -0.57
HERC3-203ENST00000407637 NPSP0C0P6 89 aa11.52□□□□□ -0.57
HERC3-203ENST00000407637 LAMP2P13473 410 aa11.52□□□□□ -0.57
HERC3-203ENST00000407637 HTR2CP28335 458 aa11.52□□□□□ -0.57
HERC3-203ENST00000407637 ARRB1P49407 418 aaPredicted RBP11.52□□□□□ -0.57
HERC3-203ENST00000407637 SRSF5Q13243 272 aaKnown RBP11.52□□□□□ -0.57
HERC3-203ENST00000407637 EIPR1Q53HC9 387 aa11.52□□□□□ -0.57
HERC3-203ENST00000407637 GGNBP1Q5YKI7 109 aa11.52□□□□□ -0.57
HERC3-203ENST00000407637 C22orf39Q6P5X5 142 aa11.52□□□□□ -0.57
HERC3-203ENST00000407637 TRAPPC5Q8IUR0 188 aa11.52□□□□□ -0.57
HERC3-203ENST00000407637 GPR137CQ8N3F9 429 aa11.52□□□□□ -0.57
HERC3-203ENST00000407637 GVQW1Q8N7I0 195 aa11.52□□□□□ -0.57
HERC3-203ENST00000407637 BEND2Q8NDZ0 799 aa11.52□□□□□ -0.57
HERC3-203ENST00000407637 OR5AR1Q8NGP9 310 aa11.52□□□□□ -0.57
HERC3-203ENST00000407637 OR14K1Q8NGZ2 314 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms