RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 TBCCD1Q9NVR7 557 aa16.37■□□□□ 0.21
SMARCB1-204ENST00000407422 STARD10Q9Y365 291 aa16.37■□□□□ 0.21
SMARCB1-204ENST00000407422 OR6C6A6NF89 314 aa16.36■□□□□ 0.21
SMARCB1-204ENST00000407422 RER1O15258 196 aa16.36■□□□□ 0.21
SMARCB1-204ENST00000407422 MEP1BQ16820 701 aa16.36■□□□□ 0.21
SMARCB1-204ENST00000407422 RFX4Q33E94 735 aa16.36■□□□□ 0.21
SMARCB1-204ENST00000407422 C1orf94Q6P1W5 598 aa16.36■□□□□ 0.21
SMARCB1-204ENST00000407422 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.36■□□□□ 0.21
SMARCB1-204ENST00000407422 MCUR1Q96AQ8 359 aa16.36■□□□□ 0.21
SMARCB1-204ENST00000407422 ELMOD3Q96FG2 381 aa16.36■□□□□ 0.21
SMARCB1-204ENST00000407422 REPIN1Q9BWE0 567 aaKnown RBP16.36■□□□□ 0.21
SMARCB1-204ENST00000407422 OR52D1Q9H346 318 aa16.36■□□□□ 0.21
SMARCB1-204ENST00000407422 ZNF665Q9H7R5 613 aa16.36■□□□□ 0.21
SMARCB1-204ENST00000407422 CLDN25C9JDP6 229 aa16.35■□□□□ 0.21
SMARCB1-204ENST00000407422 TIMM8AO60220 97 aaPredicted RBP16.35■□□□□ 0.21
SMARCB1-204ENST00000407422 OR10H3O60404 316 aa16.35■□□□□ 0.21
SMARCB1-204ENST00000407422 UBOX5O94941 541 aa16.35■□□□□ 0.21
SMARCB1-204ENST00000407422 FABP3P05413 133 aa16.35■□□□□ 0.21
SMARCB1-204ENST00000407422 ADH4P08319 380 aa16.35■□□□□ 0.21
SMARCB1-204ENST00000407422 DBHP09172 617 aa16.35■□□□□ 0.21
SMARCB1-204ENST00000407422 RRM2P31350 389 aa16.35■□□□□ 0.21
SMARCB1-204ENST00000407422 LIPAP38571 399 aa16.35■□□□□ 0.21
SMARCB1-204ENST00000407422 CENPAP49450 140 aa16.35■□□□□ 0.21
SMARCB1-204ENST00000407422 MTX3Q5HYI7 312 aa16.35■□□□□ 0.21
SMARCB1-204ENST00000407422 OR51F2Q8NH61 342 aa16.35■□□□□ 0.21
SMARCB1-204ENST00000407422 OR1F12Q8NHA8 337 aa16.35■□□□□ 0.21
SMARCB1-204ENST00000407422 NMNAT3Q96T66 252 aa16.35■□□□□ 0.21
SMARCB1-204ENST00000407422 IL1RAPQ9NPH3 570 aa16.35■□□□□ 0.21
SMARCB1-204ENST00000407422 DEAF1O75398 565 aaPredicted RBP16.34■□□□□ 0.21
SMARCB1-204ENST00000407422 DCTN3O75935 186 aa16.34■□□□□ 0.21
SMARCB1-204ENST00000407422 GSTM3P21266 225 aa16.34■□□□□ 0.21
SMARCB1-204ENST00000407422 FPR3P25089 353 aa16.34■□□□□ 0.21
SMARCB1-204ENST00000407422 ERFP50548 548 aa16.34■□□□□ 0.21
SMARCB1-204ENST00000407422 KCNMB1Q16558 191 aa16.34■□□□□ 0.21
SMARCB1-204ENST00000407422 LEG1Q6P5S2 330 aa16.34■□□□□ 0.21
SMARCB1-204ENST00000407422 C16orf89Q6UX73 402 aa16.34■□□□□ 0.21
SMARCB1-204ENST00000407422 OR6V1Q8N148 313 aa16.34■□□□□ 0.21
SMARCB1-204ENST00000407422 NPEPL1Q8NDH3 523 aa16.34■□□□□ 0.21
SMARCB1-204ENST00000407422 CMBLQ96DG6 245 aa16.34■□□□□ 0.21
SMARCB1-204ENST00000407422 SAMD8Q96LT4 415 aa16.34■□□□□ 0.21
SMARCB1-204ENST00000407422 EGLN1Q9GZT9 426 aa16.34■□□□□ 0.21
SMARCB1-204ENST00000407422 SRA1Q9HD15 236 aaKnown RBP16.34■□□□□ 0.21
SMARCB1-204ENST00000407422 DCAF16Q9NXF7 216 aa16.34■□□□□ 0.21
SMARCB1-204ENST00000407422 CGGBP1Q9UFW8 167 aaPredicted RBP16.34■□□□□ 0.21
SMARCB1-204ENST00000407422 PURGQ9UJV8 347 aaKnown RBP16.34■□□□□ 0.21
SMARCB1-204ENST00000407422 ZDHHC8Q9ULC8 765 aa16.34■□□□□ 0.21
SMARCB1-204ENST00000407422 LHFPL6Q9Y693 200 aa16.34■□□□□ 0.21
SMARCB1-204ENST00000407422 IGLV1-36A0A0B4J1U3 117 aa16.34■□□□□ 0.21
SMARCB1-204ENST00000407422 HIST1H1CP16403 213 aaKnown RBP16.34■□□□□ 0.21
SMARCB1-204ENST00000407422 PCMT1P22061 227 aa16.34■□□□□ 0.21
SMARCB1-204ENST00000407422 SLC6A6P31641 620 aa16.34■□□□□ 0.21
SMARCB1-204ENST00000407422 MXRA7P84157 204 aa16.34■□□□□ 0.21
SMARCB1-204ENST00000407422 CDK5R2Q13319 367 aa16.34■□□□□ 0.21
SMARCB1-204ENST00000407422 CORO6Q6QEF8 472 aa16.34■□□□□ 0.21
SMARCB1-204ENST00000407422 CYP2R1Q6VVX0 501 aa16.34■□□□□ 0.21
SMARCB1-204ENST00000407422 Q6ZR03 302 aa16.34■□□□□ 0.21
SMARCB1-204ENST00000407422 ZNF771Q7L3S4 317 aaPredicted RBP16.34■□□□□ 0.21
SMARCB1-204ENST00000407422 ZDHHC21Q8IVQ6 265 aa16.34■□□□□ 0.21
SMARCB1-204ENST00000407422 OR4K13Q8NH42 304 aa16.34■□□□□ 0.21
SMARCB1-204ENST00000407422 C19orf24Q9BVV8 132 aa16.34■□□□□ 0.21
SMARCB1-204ENST00000407422 IFT27Q9BW83 186 aa16.34■□□□□ 0.21
SMARCB1-204ENST00000407422 B9D1Q9UPM9 204 aa16.34■□□□□ 0.21
SMARCB1-204ENST00000407422 POLR1DQ9Y2S0 133 aa16.34■□□□□ 0.21
SMARCB1-204ENST00000407422 ARPC3O15145 178 aa16.33■□□□□ 0.2
SMARCB1-204ENST00000407422 IGHV2-5P01817 119 aa16.33■□□□□ 0.2
SMARCB1-204ENST00000407422 CD55P08174 381 aa16.33■□□□□ 0.2
SMARCB1-204ENST00000407422 CRABP1P29762 137 aa16.33■□□□□ 0.2
SMARCB1-204ENST00000407422 GSSP48637 474 aa16.33■□□□□ 0.2
SMARCB1-204ENST00000407422 TNFAIP6P98066 277 aaPredicted RBP16.33■□□□□ 0.2
SMARCB1-204ENST00000407422 ZMAT1Q5H9K5 638 aa16.33■□□□□ 0.2
SMARCB1-204ENST00000407422 RAB1CQ92928 201 aa16.33■□□□□ 0.2
SMARCB1-204ENST00000407422 TIMD4Q96H15 378 aa16.33■□□□□ 0.2
SMARCB1-204ENST00000407422 DIRC2Q96SL1 478 aa16.33■□□□□ 0.2
SMARCB1-204ENST00000407422 TMCC3Q9ULS5 477 aa16.33■□□□□ 0.2
SMARCB1-204ENST00000407422 PLPP2O43688 288 aa16.32■□□□□ 0.2
SMARCB1-204ENST00000407422 ATP6V1B2P21281 511 aa16.32■□□□□ 0.2
SMARCB1-204ENST00000407422 KITLGP21583 273 aa16.32■□□□□ 0.2
SMARCB1-204ENST00000407422 HIST1H3AP68431 136 aa16.32■□□□□ 0.2
SMARCB1-204ENST00000407422 HLXQ14774 488 aaPredicted RBP16.32■□□□□ 0.2
SMARCB1-204ENST00000407422 HIST2H3PS2Q5TEC6 136 aa16.32■□□□□ 0.2
SMARCB1-204ENST00000407422 ACSM5Q6NUN0 579 aa16.32■□□□□ 0.2
SMARCB1-204ENST00000407422 FAHD2BQ6P2I3 314 aaPredicted RBP16.32■□□□□ 0.2
SMARCB1-204ENST00000407422 PGBD2Q6P3X8 592 aa16.32■□□□□ 0.2
SMARCB1-204ENST00000407422 DNM1P34Q6PK57 102 aa16.32■□□□□ 0.2
SMARCB1-204ENST00000407422 HIST2H3AQ71DI3 136 aa16.32■□□□□ 0.2
SMARCB1-204ENST00000407422 JAZF1Q86VZ6 243 aa16.32■□□□□ 0.2
SMARCB1-204ENST00000407422 FITM2Q8N6M3 262 aa16.32■□□□□ 0.2
SMARCB1-204ENST00000407422 OR2Z1Q8NG97 314 aa16.32■□□□□ 0.2
SMARCB1-204ENST00000407422 HAVCR1Q96D42 359 aa16.32■□□□□ 0.2
SMARCB1-204ENST00000407422 FAHD2AQ96GK7 314 aa16.32■□□□□ 0.2
SMARCB1-204ENST00000407422 FN3KQ9H479 309 aa16.32■□□□□ 0.2
SMARCB1-204ENST00000407422 METTL17Q9H7H0 456 aaPredicted RBP16.32■□□□□ 0.2
SMARCB1-204ENST00000407422 RPRD1BQ9NQG5 326 aaKnown RBP16.32■□□□□ 0.2
SMARCB1-204ENST00000407422 NDE1Q9NXR1 346 aa16.32■□□□□ 0.2
SMARCB1-204ENST00000407422 TRAV20A0A0B4J274 112 aa16.31■□□□□ 0.2
SMARCB1-204ENST00000407422 OR6C68A6NDL8 312 aa16.31■□□□□ 0.2
SMARCB1-204ENST00000407422 TUBG1P23258 451 aa16.31■□□□□ 0.2
SMARCB1-204ENST00000407422 IFNGR2P38484 337 aa16.31■□□□□ 0.2
SMARCB1-204ENST00000407422 SPATS1Q496A3 300 aa16.31■□□□□ 0.2
SMARCB1-204ENST00000407422 ZNF620Q6ZNG0 422 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms