RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 ALG5Q9Y673 324 aa11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 DOCK10Q96BY6 2186 aa11.51□□□□□ -0.57
SMARCB1-203ENST00000407082 ZFHX3Q15911 3703 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 TRBV5-7A0A0A0MS05 114 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 SLC22A23A1A5C7 686 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 TVP23AA6NH52 213 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 OR4C45A6NMZ5 311 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 ETV2O00321 342 aaPredicted RBP11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 DVL2O14641 736 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 RGS13O14921 159 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 PRKNO60260 465 aaPredicted RBP11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 SLC16A7O60669 478 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 PRAF2O60831 178 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 KHDRBS3O75525 346 aaKnown RBP11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 AQP8O94778 261 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 ABHD16AO95870 558 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 PAHP00439 452 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 NR2C1P13056 603 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 COX6B1P14854 86 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 S100A1P23297 94 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 CFPP27918 469 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 FAUP35544 74 aaKnown RBP11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 EIF1P41567 113 aaKnown RBP11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 GPR85P60893 370 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 SNTA1Q13424 505 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 PLA1AQ53H76 456 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 TEX30Q5JUR7 227 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 B3GNTL1Q67FW5 361 aaPredicted RBP11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 H3F3CQ6NXT2 135 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 IL20RBQ6UXL0 311 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 STAC2Q6ZMT1 411 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 LGALS14Q8TCE9 139 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 RNF128Q8TEB7 428 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 SLC25A43Q8WUT9 341 aaPredicted RBP11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 RNF138Q8WVD3 245 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 CAPSLQ8WWF8 208 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 PHF21AQ96BD5 680 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 MAP6Q96JE9 813 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 TSSK2Q96PF2 358 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 RBP7Q96R05 134 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 OR2M2Q96R28 347 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 CDCP1Q9H5V8 836 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 SLA2Q9H6Q3 261 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 ZNF552Q9H707 407 aaPredicted RBP11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 PTGES2Q9H7Z7 377 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 CHST11Q9NPF2 352 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 FANCFQ9NPI8 374 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 SLC17A5Q9NRA2 495 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 ALKBH4Q9NXW9 302 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 TAS2R8Q9NYW2 309 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 KLRF1Q9NZS2 232 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 FRRS1LQ9P0K9 344 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 NUFIP1Q9UHK0 495 aaKnown RBP11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 POU2F3Q9UKI9 436 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 FOXJ3Q9UPW0 622 aa11.5□□□□□ -0.57
SMARCB1-203ENST00000407082 EXPH5Q8NEV8 1989 aa11.49□□□□□ -0.57
SMARCB1-203ENST00000407082 A0A1B0GUH1 482 aa11.49□□□□□ -0.57
SMARCB1-203ENST00000407082 A0A1W2PPK0 400 aa11.49□□□□□ -0.57
SMARCB1-203ENST00000407082 MAGEB4O15481 346 aaPredicted RBP11.49□□□□□ -0.57
SMARCB1-203ENST00000407082 KRT33AO76009 404 aa11.49□□□□□ -0.57
SMARCB1-203ENST00000407082 AKR7A3O95154 331 aa11.49□□□□□ -0.57
SMARCB1-203ENST00000407082 HRGP04196 525 aa11.49□□□□□ -0.57
SMARCB1-203ENST00000407082 TFPIP10646 304 aa11.49□□□□□ -0.57
SMARCB1-203ENST00000407082 ARSBP15848 533 aa11.49□□□□□ -0.57
SMARCB1-203ENST00000407082 ADH6P28332 368 aa11.49□□□□□ -0.57
SMARCB1-203ENST00000407082 NANOS3P60323 173 aaKnown RBP11.49□□□□□ -0.57
SMARCB1-203ENST00000407082 ADAM8P78325 824 aa11.49□□□□□ -0.57
SMARCB1-203ENST00000407082 SNTB2Q13425 540 aaKnown RBP11.49□□□□□ -0.57
SMARCB1-203ENST00000407082 TOMM20Q15388 145 aa11.49□□□□□ -0.57
SMARCB1-203ENST00000407082 ACER2Q5QJU3 275 aa11.49□□□□□ -0.57
SMARCB1-203ENST00000407082 ABHD17BQ5VST6 288 aa11.49□□□□□ -0.57
SMARCB1-203ENST00000407082 ZNF704Q6ZNC4 412 aaPredicted RBP11.49□□□□□ -0.57
SMARCB1-203ENST00000407082 RPS19BP1Q86WX3 136 aaKnown RBP11.49□□□□□ -0.57
SMARCB1-203ENST00000407082 PLCZ1Q86YW0 608 aa11.49□□□□□ -0.57
SMARCB1-203ENST00000407082 CMTM4Q8IZR5 234 aa11.49□□□□□ -0.57
SMARCB1-203ENST00000407082 UBE2J2Q8N2K1 259 aa11.49□□□□□ -0.57
SMARCB1-203ENST00000407082 OR5H6Q8NGV6 325 aa11.49□□□□□ -0.57
SMARCB1-203ENST00000407082 TSEN15Q8WW01 171 aaKnown RBP11.49□□□□□ -0.57
SMARCB1-203ENST00000407082 YIPF5Q969M3 257 aa11.49□□□□□ -0.57
SMARCB1-203ENST00000407082 HAVCR1Q96D42 359 aa11.49□□□□□ -0.57
SMARCB1-203ENST00000407082 POM121Q96HA1 1249 aa11.49□□□□□ -0.57
SMARCB1-203ENST00000407082 C4orf45Q96LM5 186 aa11.49□□□□□ -0.57
SMARCB1-203ENST00000407082 ZFP3Q96NJ6 502 aa11.49□□□□□ -0.57
SMARCB1-203ENST00000407082 ABHD1Q96SE0 405 aa11.49□□□□□ -0.57
SMARCB1-203ENST00000407082 ZNF587Q96SQ5 575 aaPredicted RBP11.49□□□□□ -0.57
SMARCB1-203ENST00000407082 CACNG6Q9BXT2 260 aa11.49□□□□□ -0.57
SMARCB1-203ENST00000407082 RTN4RQ9BZR6 473 aa11.49□□□□□ -0.57
SMARCB1-203ENST00000407082 MED28Q9H204 178 aa11.49□□□□□ -0.57
SMARCB1-203ENST00000407082 METTL7AQ9H8H3 244 aa11.49□□□□□ -0.57
SMARCB1-203ENST00000407082 ELOVL3Q9HB03 270 aa11.49□□□□□ -0.57
SMARCB1-203ENST00000407082 DIABLOQ9NR28 239 aa11.49□□□□□ -0.57
SMARCB1-203ENST00000407082 STEAP1Q9UHE8 339 aa11.49□□□□□ -0.57
SMARCB1-203ENST00000407082 ING4Q9UNL4 249 aa11.49□□□□□ -0.57
SMARCB1-203ENST00000407082 MRPS7Q9Y2R9 242 aaKnown RBP11.49□□□□□ -0.57
SMARCB1-203ENST00000407082 ZGRF1Q86YA3 2104 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 PKDREJQ9NTG1 2253 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 A0A087WZY1 265 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 IGLV1-36A0A0B4J1U3 117 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 ACOD1A6NK06 481 aa11.48□□□□□ -0.57
SMARCB1-203ENST00000407082 TMEM200CA6NKL6 621 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms