RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 HIST1H2BMQ99879 126 aa12.72□□□□□ -0.37
DUSP28-202ENST00000405954 SLC17A9Q9BYT1 436 aa12.72□□□□□ -0.37
DUSP28-202ENST00000405954 ASCL3Q9NQ33 180 aa12.72□□□□□ -0.37
DUSP28-202ENST00000405954 RXFP3Q9NSD7 469 aa12.72□□□□□ -0.37
DUSP28-202ENST00000405954 KCNE3Q9Y6H6 103 aa12.72□□□□□ -0.37
DUSP28-202ENST00000405954 PTPRDP23468 1912 aa12.72□□□□□ -0.37
DUSP28-202ENST00000405954 A0A1B0GTH9 108 aa12.72□□□□□ -0.37
DUSP28-202ENST00000405954 GFYI3L273 518 aa12.72□□□□□ -0.37
DUSP28-202ENST00000405954 WNT11O96014 354 aa12.72□□□□□ -0.37
DUSP28-202ENST00000405954 ELNP15502 786 aa12.72□□□□□ -0.37
DUSP28-202ENST00000405954 TSPAN7P41732 249 aa12.72□□□□□ -0.37
DUSP28-202ENST00000405954 RPS27P42677 84 aaKnown RBP12.72□□□□□ -0.37
DUSP28-202ENST00000405954 NPY4RP50391 375 aa12.72□□□□□ -0.37
DUSP28-202ENST00000405954 RAB32Q13637 225 aa12.72□□□□□ -0.37
DUSP28-202ENST00000405954 TMEM35AQ53FP2 167 aa12.72□□□□□ -0.37
DUSP28-202ENST00000405954 ANKRD39Q53RE8 183 aa12.72□□□□□ -0.37
DUSP28-202ENST00000405954 ARSJQ5FYB0 599 aaPredicted RBP12.72□□□□□ -0.37
DUSP28-202ENST00000405954 WDR88Q6ZMY6 472 aa12.72□□□□□ -0.37
DUSP28-202ENST00000405954 ZNF683Q8IZ20 524 aa12.72□□□□□ -0.37
DUSP28-202ENST00000405954 COMMD1Q8N668 190 aa12.72□□□□□ -0.37
DUSP28-202ENST00000405954 MARCH1Q8TCQ1 289 aa12.72□□□□□ -0.37
DUSP28-202ENST00000405954 GPR148Q8TDV2 347 aa12.72□□□□□ -0.37
DUSP28-202ENST00000405954 FAM210BQ96KR6 192 aa12.72□□□□□ -0.37
DUSP28-202ENST00000405954 NMNAT3Q96T66 252 aa12.72□□□□□ -0.37
DUSP28-202ENST00000405954 MACROD1Q9BQ69 325 aa12.72□□□□□ -0.37
DUSP28-202ENST00000405954 GLIPR2Q9H4G4 154 aa12.72□□□□□ -0.37
DUSP28-202ENST00000405954 C20orf141Q9NUB4 165 aa12.72□□□□□ -0.37
DUSP28-202ENST00000405954 KCNE5Q9UJ90 142 aa12.72□□□□□ -0.37
DUSP28-202ENST00000405954 TIMM10BQ9Y5J6 103 aa12.72□□□□□ -0.37
DUSP28-202ENST00000405954 ASCC3Q8N3C0 2202 aaKnown RBP12.71□□□□□ -0.37
DUSP28-202ENST00000405954 C1QL1O75973 258 aa12.71□□□□□ -0.37
DUSP28-202ENST00000405954 FCGR2CP31995 323 aa12.71□□□□□ -0.37
DUSP28-202ENST00000405954 MC3RP41968 323 aa12.71□□□□□ -0.37
DUSP28-202ENST00000405954 OR3A1P47881 315 aa12.71□□□□□ -0.37
DUSP28-202ENST00000405954 CD81P60033 236 aa12.71□□□□□ -0.37
DUSP28-202ENST00000405954 DRAM2Q6UX65 266 aa12.71□□□□□ -0.37
DUSP28-202ENST00000405954 TMPRSS11FQ6ZWK6 438 aa12.71□□□□□ -0.37
DUSP28-202ENST00000405954 TRAPPC6BQ86SZ2 158 aa12.71□□□□□ -0.37
DUSP28-202ENST00000405954 OR51F2Q8NH61 342 aa12.71□□□□□ -0.37
DUSP28-202ENST00000405954 TAAR9Q96RI9 348 aa12.71□□□□□ -0.37
DUSP28-202ENST00000405954 TRIM2Q9C040 744 aa12.71□□□□□ -0.37
DUSP28-202ENST00000405954 ST6GALNAC2Q9UJ37 374 aa12.71□□□□□ -0.37
DUSP28-202ENST00000405954 HSF4Q9ULV5 492 aa12.71□□□□□ -0.37
DUSP28-202ENST00000405954 MYOFQ9NZM1 2061 aa12.71□□□□□ -0.37
DUSP28-202ENST00000405954 PIN1P1O15428 100 aa12.71□□□□□ -0.37
DUSP28-202ENST00000405954 DOK2O60496 412 aa12.71□□□□□ -0.37
DUSP28-202ENST00000405954 DBIP07108 87 aaKnown RBP12.71□□□□□ -0.37
DUSP28-202ENST00000405954 ASGR1P07306 291 aa12.71□□□□□ -0.37
DUSP28-202ENST00000405954 CSNK2A2P19784 350 aaPredicted RBP12.71□□□□□ -0.37
DUSP28-202ENST00000405954 RBMXP38159 391 aaKnown RBP12.71□□□□□ -0.37
DUSP28-202ENST00000405954 TLE4Q04727 773 aa12.71□□□□□ -0.37
DUSP28-202ENST00000405954 CLLU1OSQ5K130 101 aa12.71□□□□□ -0.37
DUSP28-202ENST00000405954 OR2L8Q8NGY9 312 aa12.71□□□□□ -0.37
DUSP28-202ENST00000405954 C22orf15Q8WYQ4 148 aa12.71□□□□□ -0.37
DUSP28-202ENST00000405954 Q96M85 177 aa12.71□□□□□ -0.37
DUSP28-202ENST00000405954 KIAA0100Q14667 2235 aaKnown RBP12.71□□□□□ -0.38
DUSP28-202ENST00000405954 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.71□□□□□ -0.38
DUSP28-202ENST00000405954 C20orf202A1L168 122 aa12.71□□□□□ -0.38
DUSP28-202ENST00000405954 TNFSF12O43508 249 aa12.71□□□□□ -0.38
DUSP28-202ENST00000405954 IFNA21P01568 189 aa12.71□□□□□ -0.38
DUSP28-202ENST00000405954 PGA4P0DJD7 388 aa12.71□□□□□ -0.38
DUSP28-202ENST00000405954 PGA5P0DJD9 388 aa12.71□□□□□ -0.38
DUSP28-202ENST00000405954 VASPP50552 380 aaPredicted RBP12.71□□□□□ -0.38
DUSP28-202ENST00000405954 RPS23P62266 143 aaKnown RBP12.71□□□□□ -0.38
DUSP28-202ENST00000405954 ARFRP1Q13795 201 aa12.71□□□□□ -0.38
DUSP28-202ENST00000405954 C10orf91Q5T1B1 145 aa12.71□□□□□ -0.38
DUSP28-202ENST00000405954 ZNF664Q8N3J9 261 aa12.71□□□□□ -0.38
DUSP28-202ENST00000405954 M1APQ8TC57 530 aa12.71□□□□□ -0.38
DUSP28-202ENST00000405954 APOBEC4Q8WW27 367 aaKnown RBP12.71□□□□□ -0.38
DUSP28-202ENST00000405954 DIO2Q92813 273 aa12.71□□□□□ -0.38
DUSP28-202ENST00000405954 CASD1Q96PB1 797 aa12.71□□□□□ -0.38
DUSP28-202ENST00000405954 OR5AC2Q9NZP5 309 aa12.71□□□□□ -0.38
DUSP28-202ENST00000405954 CGGBP1Q9UFW8 167 aaPredicted RBP12.71□□□□□ -0.38
DUSP28-202ENST00000405954 PCDHB8Q9UN66 801 aa12.71□□□□□ -0.38
DUSP28-202ENST00000405954 PPM1AP35813 382 aa12.7□□□□□ -0.38
DUSP28-202ENST00000405954 CCR4P51679 360 aa12.7□□□□□ -0.38
DUSP28-202ENST00000405954 SNRPD1P62314 119 aaKnown RBP12.7□□□□□ -0.38
DUSP28-202ENST00000405954 SMAD3P84022 425 aaKnown RBP12.7□□□□□ -0.38
DUSP28-202ENST00000405954 NAAAQ02083 359 aa12.7□□□□□ -0.38
DUSP28-202ENST00000405954 PMS2P11Q13670 270 aa12.7□□□□□ -0.38
DUSP28-202ENST00000405954 NR0B2Q15466 257 aa12.7□□□□□ -0.38
DUSP28-202ENST00000405954 FAM110CQ1W6H9 321 aa12.7□□□□□ -0.38
DUSP28-202ENST00000405954 GLB1LQ6UWU2 654 aa12.7□□□□□ -0.38
DUSP28-202ENST00000405954 TET1Q8NFU7 2136 aa12.7□□□□□ -0.38
DUSP28-202ENST00000405954 SFXN5Q8TD22 340 aa12.7□□□□□ -0.38
DUSP28-202ENST00000405954 OR7D2Q96RA2 312 aa12.7□□□□□ -0.38
DUSP28-202ENST00000405954 TPSD1Q9BZJ3 242 aa12.7□□□□□ -0.38
DUSP28-202ENST00000405954 B4GALT6Q9UBX8 382 aa12.7□□□□□ -0.38
DUSP28-202ENST00000405954 PLPP1O14494 284 aa12.7□□□□□ -0.38
DUSP28-202ENST00000405954 PGA3P0DJD8 388 aa12.7□□□□□ -0.38
DUSP28-202ENST00000405954 RPL12P30050 165 aaKnown RBP12.7□□□□□ -0.38
DUSP28-202ENST00000405954 TRA2AQ13595 282 aaKnown RBP eCLIP12.7□□□□□ -0.38
DUSP28-202ENST00000405954 GLYATL3Q5SZD4 288 aa12.7□□□□□ -0.38
DUSP28-202ENST00000405954 RTN4RL1Q86UN2 441 aaPredicted RBP12.7□□□□□ -0.38
DUSP28-202ENST00000405954 OR6X1Q8NH79 312 aa12.7□□□□□ -0.38
DUSP28-202ENST00000405954 TM4SF18Q96CE8 201 aa12.7□□□□□ -0.38
DUSP28-202ENST00000405954 RBM18Q96H35 190 aaKnown RBP12.7□□□□□ -0.38
DUSP28-202ENST00000405954 SLC2A4RGQ9NR83 387 aa12.7□□□□□ -0.38
DUSP28-202ENST00000405954 V9GYS6 101 aa12.7□□□□□ -0.38
DUSP28-202ENST00000405954 LOC102724200A0A096LPH7 203 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms