RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 C11orf98E9PRG8 122 aa17.78■□□□□ 0.44
CCDC47-202ENST00000403162 LMO7DNF2Z398 122 aa17.78■□□□□ 0.44
CCDC47-202ENST00000403162 NUPL2O15504 423 aaKnown RBP17.78■□□□□ 0.44
CCDC47-202ENST00000403162 ICAM2P13598 275 aa17.78■□□□□ 0.44
CCDC47-202ENST00000403162 ARRB1P49407 418 aaPredicted RBP17.78■□□□□ 0.44
CCDC47-202ENST00000403162 RIDAP52758 137 aaKnown RBP17.78■□□□□ 0.44
CCDC47-202ENST00000403162 RPL27P61353 136 aaKnown RBP17.78■□□□□ 0.44
CCDC47-202ENST00000403162 ZNF117Q03924 483 aa17.78■□□□□ 0.44
CCDC47-202ENST00000403162 SGCBQ16585 318 aa17.78■□□□□ 0.44
CCDC47-202ENST00000403162 MAMDC2Q7Z304 686 aaPredicted RBP17.78■□□□□ 0.44
CCDC47-202ENST00000403162 PPP1R14AQ96A00 147 aa17.78■□□□□ 0.44
CCDC47-202ENST00000403162 SLC46A1Q96NT5 459 aa17.78■□□□□ 0.44
CCDC47-202ENST00000403162 COL25A1Q9BXS0 654 aaPredicted RBP17.78■□□□□ 0.44
CCDC47-202ENST00000403162 R4GN57 208 aa17.78■□□□□ 0.44
CCDC47-202ENST00000403162 KANTRA0A1W2PQU2 76 aa17.77■□□□□ 0.44
CCDC47-202ENST00000403162 FRG2CA6NGY1 282 aa17.77■□□□□ 0.44
CCDC47-202ENST00000403162 BCL2L11O43521 198 aa17.77■□□□□ 0.44
CCDC47-202ENST00000403162 ALOX12BO75342 701 aa17.77■□□□□ 0.44
CCDC47-202ENST00000403162 MT-ATP6P00846 226 aa17.77■□□□□ 0.44
CCDC47-202ENST00000403162 SPARCP09486 303 aa17.77■□□□□ 0.44
CCDC47-202ENST00000403162 OTPQ5XKR4 325 aa17.77■□□□□ 0.44
CCDC47-202ENST00000403162 C11orf87Q6NUJ2 197 aa17.77■□□□□ 0.44
CCDC47-202ENST00000403162 ZNF321PQ8N8H1 164 aa17.77■□□□□ 0.44
CCDC47-202ENST00000403162 PTPMT1Q8WUK0 201 aaPredicted RBP17.77■□□□□ 0.44
CCDC47-202ENST00000403162 PHYHIPLQ96FC7 376 aa17.77■□□□□ 0.44
CCDC47-202ENST00000403162 TCTN2Q96GX1 697 aa17.77■□□□□ 0.44
CCDC47-202ENST00000403162 ZNF285Q96NJ3 590 aa17.77■□□□□ 0.44
CCDC47-202ENST00000403162 NKX3-1Q99801 234 aaPredicted RBP17.77■□□□□ 0.44
CCDC47-202ENST00000403162 IFT46Q9NQC8 304 aa17.77■□□□□ 0.44
CCDC47-202ENST00000403162 MRTO4Q9UKD2 239 aaKnown RBP17.77■□□□□ 0.44
CCDC47-202ENST00000403162 MRPS18BQ9Y676 258 aaKnown RBP17.77■□□□□ 0.44
CCDC47-202ENST00000403162 WDFY4Q6ZS81 3184 aa17.77■□□□□ 0.43
CCDC47-202ENST00000403162 MEGF11A6BM72 1044 aa17.77■□□□□ 0.43
CCDC47-202ENST00000403162 PATE3B3GLJ2 98 aa17.77■□□□□ 0.43
CCDC47-202ENST00000403162 DNASE2O00115 360 aaPredicted RBP17.77■□□□□ 0.43
CCDC47-202ENST00000403162 OR6A2O95222 327 aa17.77■□□□□ 0.43
CCDC47-202ENST00000403162 CD34P28906 385 aa17.77■□□□□ 0.43
CCDC47-202ENST00000403162 INSM1Q01101 510 aaPredicted RBP17.77■□□□□ 0.43
CCDC47-202ENST00000403162 PMPCAQ10713 525 aa17.77■□□□□ 0.43
CCDC47-202ENST00000403162 ACKR1Q16570 336 aa17.77■□□□□ 0.43
CCDC47-202ENST00000403162 LIN54Q6MZP7 749 aa17.77■□□□□ 0.43
CCDC47-202ENST00000403162 RABEPKQ7Z6M1 372 aa17.77■□□□□ 0.43
CCDC47-202ENST00000403162 TMEM17Q86X19 198 aa17.77■□□□□ 0.43
CCDC47-202ENST00000403162 BPIFB2Q8N4F0 458 aa17.77■□□□□ 0.43
CCDC47-202ENST00000403162 OR13C8Q8NGS7 320 aa17.77■□□□□ 0.43
CCDC47-202ENST00000403162 PTX4Q96A99 478 aa17.77■□□□□ 0.43
CCDC47-202ENST00000403162 WDR13Q9H1Z4 485 aa17.77■□□□□ 0.43
CCDC47-202ENST00000403162 PLCL2Q9UPR0 1127 aa17.77■□□□□ 0.43
CCDC47-202ENST00000403162 TMEM184BQ9Y519 407 aaPredicted RBP17.77■□□□□ 0.43
CCDC47-202ENST00000403162 CACNA1CQ13936 2221 aa17.77■□□□□ 0.43
CCDC47-202ENST00000403162 MPTX1A8MV57 137 aa17.76■□□□□ 0.43
CCDC47-202ENST00000403162 NUDT21O43809 227 aaKnown RBP17.76■□□□□ 0.43
CCDC47-202ENST00000403162 SLC16A7O60669 478 aa17.76■□□□□ 0.43
CCDC47-202ENST00000403162 ICOSLGO75144 302 aa17.76■□□□□ 0.43
CCDC47-202ENST00000403162 HLA-GP17693 338 aa17.76■□□□□ 0.43
CCDC47-202ENST00000403162 C1QL3Q5VWW1 255 aa17.76■□□□□ 0.43
CCDC47-202ENST00000403162 METTL27Q8N6F8 245 aaPredicted RBP17.76■□□□□ 0.43
CCDC47-202ENST00000403162 SLC25A44Q96H78 314 aaPredicted RBP17.76■□□□□ 0.43
CCDC47-202ENST00000403162 FOXN4Q96NZ1 517 aa17.76■□□□□ 0.43
CCDC47-202ENST00000403162 ADOQ96SZ5 270 aa17.76■□□□□ 0.43
CCDC47-202ENST00000403162 PTDSS2Q9BVG9 487 aa17.76■□□□□ 0.43
CCDC47-202ENST00000403162 RTN4RQ9BZR6 473 aa17.76■□□□□ 0.43
CCDC47-202ENST00000403162 SLC2A8Q9NY64 477 aa17.76■□□□□ 0.43
CCDC47-202ENST00000403162 KLK13Q9UKR3 277 aa17.76■□□□□ 0.43
CCDC47-202ENST00000403162 LRP12Q9Y561 859 aa17.76■□□□□ 0.43
CCDC47-202ENST00000403162 CPAMD8Q8IZJ3 1885 aa17.76■□□□□ 0.43
CCDC47-202ENST00000403162 RORAP35398 523 aa17.76■□□□□ 0.43
CCDC47-202ENST00000403162 STARP49675 285 aa17.76■□□□□ 0.43
CCDC47-202ENST00000403162 ADAM8P78325 824 aa17.76■□□□□ 0.43
CCDC47-202ENST00000403162 MEF2DQ14814 521 aa17.76■□□□□ 0.43
CCDC47-202ENST00000403162 ZMYND11Q15326 602 aa17.76■□□□□ 0.43
CCDC47-202ENST00000403162 SHBQ15464 509 aa17.76■□□□□ 0.43
CCDC47-202ENST00000403162 HLA-BQ31612 363 aa17.76■□□□□ 0.43
CCDC47-202ENST00000403162 FAM74A1Q5RGS3 127 aa17.76■□□□□ 0.43
CCDC47-202ENST00000403162 SLC6A7Q99884 636 aa17.76■□□□□ 0.43
CCDC47-202ENST00000403162 ABHD6Q9BV23 337 aa17.76■□□□□ 0.43
CCDC47-202ENST00000403162 TXNIPQ9H3M7 391 aa17.76■□□□□ 0.43
CCDC47-202ENST00000403162 TMEM185BQ9H7F4 350 aa17.76■□□□□ 0.43
CCDC47-202ENST00000403162 COMMD9Q9P000 198 aa17.76■□□□□ 0.43
CCDC47-202ENST00000403162 CGGBP1Q9UFW8 167 aaPredicted RBP17.76■□□□□ 0.43
CCDC47-202ENST00000403162 PI4KAP42356 2102 aa17.75■□□□□ 0.43
CCDC47-202ENST00000403162 LOC390937A0A1W2PQ73 354 aa17.75■□□□□ 0.43
CCDC47-202ENST00000403162 HCRTR2O43614 444 aa17.75■□□□□ 0.43
CCDC47-202ENST00000403162 SRSF10O75494 262 aaKnown RBP17.75■□□□□ 0.43
CCDC47-202ENST00000403162 CNR1P21554 472 aa17.75■□□□□ 0.43
CCDC47-202ENST00000403162 GABRA4P48169 554 aa17.75■□□□□ 0.43
CCDC47-202ENST00000403162 EIF2B1Q14232 305 aaKnown RBP17.75■□□□□ 0.43
CCDC47-202ENST00000403162 ZNF169Q14929 603 aaPredicted RBP17.75■□□□□ 0.43
CCDC47-202ENST00000403162 TOMM34Q15785 309 aaPredicted RBP17.75■□□□□ 0.43
CCDC47-202ENST00000403162 TRIM61Q5EBN2 209 aa17.75■□□□□ 0.43
CCDC47-202ENST00000403162 VWA2Q5GFL6 755 aa17.75■□□□□ 0.43
CCDC47-202ENST00000403162 PHF19Q5T6S3 580 aa17.75■□□□□ 0.43
CCDC47-202ENST00000403162 PAPD4Q6PIY7 484 aaKnown RBP17.75■□□□□ 0.43
CCDC47-202ENST00000403162 SLC25A45Q8N413 288 aa17.75■□□□□ 0.43
CCDC47-202ENST00000403162 MAP3K3Q99759 626 aa17.75■□□□□ 0.43
CCDC47-202ENST00000403162 SLC6A15Q9H2J7 730 aa17.75■□□□□ 0.43
CCDC47-202ENST00000403162 TAS2R3Q9NYW6 316 aa17.75■□□□□ 0.43
CCDC47-202ENST00000403162 NOP16Q9Y3C1 178 aaKnown RBP17.75■□□□□ 0.43
CCDC47-202ENST00000403162 RNF222A6NCQ9 220 aa17.74■□□□□ 0.43
CCDC47-202ENST00000403162 DISC1C4P0D8 188 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms