RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 SLC7A6Q92536 515 aa13.83□□□□□ -0.2
HMGA1-204ENST00000401473 RHNO1Q9BSD3 238 aa13.83□□□□□ -0.2
HMGA1-204ENST00000401473 ABHD6Q9BV23 337 aa13.83□□□□□ -0.2
HMGA1-204ENST00000401473 KCNN3Q9UGI6 736 aa13.83□□□□□ -0.2
HMGA1-204ENST00000401473 COPS3Q9UNS2 423 aa13.83□□□□□ -0.2
HMGA1-204ENST00000401473 FAM221AA4D161 298 aa13.82□□□□□ -0.2
HMGA1-204ENST00000401473 J3QRE1 110 aa13.82□□□□□ -0.2
HMGA1-204ENST00000401473 TMCC2O75069 709 aa13.82□□□□□ -0.2
HMGA1-204ENST00000401473 ZNF91Q05481 1191 aa13.82□□□□□ -0.2
HMGA1-204ENST00000401473 SPOCK1Q08629 439 aa13.82□□□□□ -0.2
HMGA1-204ENST00000401473 SCRN3Q0VDG4 424 aa13.82□□□□□ -0.2
HMGA1-204ENST00000401473 TMED1Q13445 227 aa13.82□□□□□ -0.2
HMGA1-204ENST00000401473 NCMAPQ5T1S8 102 aa13.82□□□□□ -0.2
HMGA1-204ENST00000401473 LCN1P1Q5VSP4 162 aa13.82□□□□□ -0.2
HMGA1-204ENST00000401473 PAQR4Q8N4S7 273 aaPredicted RBP13.82□□□□□ -0.2
HMGA1-204ENST00000401473 RFLNBQ8N5W9 214 aa13.82□□□□□ -0.2
HMGA1-204ENST00000401473 OR2AJ1Q8NGZ0 328 aa13.82□□□□□ -0.2
HMGA1-204ENST00000401473 RNFT2Q96EX2 444 aa13.82□□□□□ -0.2
HMGA1-204ENST00000401473 CNBD2Q96M20 576 aa13.82□□□□□ -0.2
HMGA1-204ENST00000401473 C1orf198Q9H425 327 aa13.82□□□□□ -0.2
HMGA1-204ENST00000401473 NGBQ9NPG2 151 aa13.82□□□□□ -0.2
HMGA1-204ENST00000401473 VPS13CQ709C8 3753 aa13.82□□□□□ -0.2
HMGA1-204ENST00000401473 A0A1W2PPR1 153 aa13.82□□□□□ -0.2
HMGA1-204ENST00000401473 PRR32B1ATL7 298 aa13.82□□□□□ -0.2
HMGA1-204ENST00000401473 PRF1P14222 555 aa13.82□□□□□ -0.2
HMGA1-204ENST00000401473 PAX7P23759 505 aa13.82□□□□□ -0.2
HMGA1-204ENST00000401473 STOMP27105 288 aa13.82□□□□□ -0.2
HMGA1-204ENST00000401473 CALCRP30988 508 aa13.82□□□□□ -0.2
HMGA1-204ENST00000401473 SLC15A1P46059 708 aa13.82□□□□□ -0.2
HMGA1-204ENST00000401473 C3orf36Q3SXR2 165 aa13.82□□□□□ -0.2
HMGA1-204ENST00000401473 TMEM108Q6UXF1 575 aa13.82□□□□□ -0.2
HMGA1-204ENST00000401473 ALDH16A1Q8IZ83 802 aa13.82□□□□□ -0.2
HMGA1-204ENST00000401473 MARVELD3Q96A59 401 aa13.82□□□□□ -0.2
HMGA1-204ENST00000401473 LGALS12Q96DT0 336 aa13.82□□□□□ -0.2
HMGA1-204ENST00000401473 POM121L2Q96KW2 1035 aa13.82□□□□□ -0.2
HMGA1-204ENST00000401473 CNN2Q99439 309 aaKnown RBP13.82□□□□□ -0.2
HMGA1-204ENST00000401473 YIPF3Q9GZM5 350 aa13.82□□□□□ -0.2
HMGA1-204ENST00000401473 MYRFQ9Y2G1 1151 aa13.82□□□□□ -0.2
HMGA1-204ENST00000401473 OR6C6A6NF89 314 aa13.81□□□□□ -0.2
HMGA1-204ENST00000401473 A6NNC1 897 aa13.81□□□□□ -0.2
HMGA1-204ENST00000401473 ABCD4O14678 606 aa13.81□□□□□ -0.2
HMGA1-204ENST00000401473 DENRO43583 198 aaKnown RBP13.81□□□□□ -0.2
HMGA1-204ENST00000401473 XPNPEP2O43895 674 aa13.81□□□□□ -0.2
HMGA1-204ENST00000401473 DOK2O60496 412 aa13.81□□□□□ -0.2
HMGA1-204ENST00000401473 PLAUP00749 431 aa13.81□□□□□ -0.2
HMGA1-204ENST00000401473 ADRA2AP08913 450 aa13.81□□□□□ -0.2
HMGA1-204ENST00000401473 DBHP09172 617 aa13.81□□□□□ -0.2
HMGA1-204ENST00000401473 ZNF35P13682 527 aa13.81□□□□□ -0.2
HMGA1-204ENST00000401473 PTAFRP25105 342 aa13.81□□□□□ -0.2
HMGA1-204ENST00000401473 NAAAQ02083 359 aa13.81□□□□□ -0.2
HMGA1-204ENST00000401473 PLP2Q04941 152 aa13.81□□□□□ -0.2
HMGA1-204ENST00000401473 EIF2B1Q14232 305 aaKnown RBP13.81□□□□□ -0.2
HMGA1-204ENST00000401473 BEX5Q5H9J7 111 aa13.81□□□□□ -0.2
HMGA1-204ENST00000401473 ELFN2Q5R3F8 820 aa13.81□□□□□ -0.2
HMGA1-204ENST00000401473 C6orf141Q5SZD1 244 aa13.81□□□□□ -0.2
HMGA1-204ENST00000401473 SLC30A7Q8NEW0 376 aa13.81□□□□□ -0.2
HMGA1-204ENST00000401473 THEM6Q8WUY1 208 aa13.81□□□□□ -0.2
HMGA1-204ENST00000401473 PIK3IP1Q96FE7 263 aa13.81□□□□□ -0.2
HMGA1-204ENST00000401473 ESRP2Q9H6T0 727 aaKnown RBP13.81□□□□□ -0.2
HMGA1-204ENST00000401473 SLC24A3Q9HC58 644 aa13.81□□□□□ -0.2
HMGA1-204ENST00000401473 MRPS18AQ9NVS2 196 aaKnown RBP13.81□□□□□ -0.2
HMGA1-204ENST00000401473 UBAP1Q9NZ09 502 aa13.81□□□□□ -0.2
HMGA1-204ENST00000401473 EXOGQ9Y2C4 368 aaKnown RBP13.81□□□□□ -0.2
HMGA1-204ENST00000401473 IQCMA0A1B0GVH7 501 aa13.8□□□□□ -0.2
HMGA1-204ENST00000401473 SNTNA6NMZ2 147 aa13.8□□□□□ -0.2
HMGA1-204ENST00000401473 MAGEB4O15481 346 aaPredicted RBP13.8□□□□□ -0.2
HMGA1-204ENST00000401473 LYNP07948 512 aa13.8□□□□□ -0.2
HMGA1-204ENST00000401473 ATP6V1E1P36543 226 aa13.8□□□□□ -0.2
HMGA1-204ENST00000401473 SPATC1Q76KD6 591 aa13.8□□□□□ -0.2
HMGA1-204ENST00000401473 SSX6Q7RTT6 188 aa13.8□□□□□ -0.2
HMGA1-204ENST00000401473 SLC35F2Q8IXU6 374 aa13.8□□□□□ -0.2
HMGA1-204ENST00000401473 PIAS4Q8N2W9 510 aaPredicted RBP13.8□□□□□ -0.2
HMGA1-204ENST00000401473 OR1F12Q8NHA8 337 aa13.8□□□□□ -0.2
HMGA1-204ENST00000401473 SLAMF6Q96DU3 332 aa13.8□□□□□ -0.2
HMGA1-204ENST00000401473 TBX5Q99593 518 aa13.8□□□□□ -0.2
HMGA1-204ENST00000401473 MOV10Q9HCE1 1003 aaKnown RBP13.8□□□□□ -0.2
HMGA1-204ENST00000401473 RPL36Q9Y3U8 105 aaKnown RBP13.8□□□□□ -0.2
HMGA1-204ENST00000401473 IGHV2OR16-5A0A0B4J2B6 119 aa13.8□□□□□ -0.2
HMGA1-204ENST00000401473 A0A1W2PQL4 384 aaPredicted RBP13.8□□□□□ -0.2
HMGA1-204ENST00000401473 C5orf49A4QMS7 147 aa13.8□□□□□ -0.2
HMGA1-204ENST00000401473 PSMD9O00233 223 aa13.8□□□□□ -0.2
HMGA1-204ENST00000401473 CCNOP22674 350 aa13.8□□□□□ -0.2
HMGA1-204ENST00000401473 HTR5AP47898 357 aa13.8□□□□□ -0.2
HMGA1-204ENST00000401473 CXCR4P61073 352 aa13.8□□□□□ -0.2
HMGA1-204ENST00000401473 MVKQ03426 396 aa13.8□□□□□ -0.2
HMGA1-204ENST00000401473 POU4F2Q12837 409 aa13.8□□□□□ -0.2
HMGA1-204ENST00000401473 RAB35Q15286 201 aa13.8□□□□□ -0.2
HMGA1-204ENST00000401473 NAA40Q86UY6 237 aa13.8□□□□□ -0.2
HMGA1-204ENST00000401473 BPIFB6Q8NFQ5 453 aa13.8□□□□□ -0.2
HMGA1-204ENST00000401473 RNF133Q8WVZ7 376 aa13.8□□□□□ -0.2
HMGA1-204ENST00000401473 TTTY10Q9BZA0 68 aa13.8□□□□□ -0.2
HMGA1-204ENST00000401473 CENPMQ9NSP4 180 aa13.8□□□□□ -0.2
HMGA1-204ENST00000401473 LAMP5Q9UJQ1 280 aa13.8□□□□□ -0.2
HMGA1-204ENST00000401473 CTAG2O75638 210 aa13.79□□□□□ -0.2
HMGA1-204ENST00000401473 OR2T7P0C7T2 308 aa13.79□□□□□ -0.2
HMGA1-204ENST00000401473 COX5BP10606 129 aa13.79□□□□□ -0.2
HMGA1-204ENST00000401473 HGFACQ04756 655 aa13.79□□□□□ -0.2
HMGA1-204ENST00000401473 ADAM5Q6NVV9 412 aa13.79□□□□□ -0.2
HMGA1-204ENST00000401473 ZNF454Q8N9F8 522 aa13.79□□□□□ -0.2
HMGA1-204ENST00000401473 OR2T27Q8NH04 317 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms