RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 UBL7Q96S82 380 aaPredicted RBP16.51■□□□□ 0.23
COL18A1-204ENST00000400337 ZCCHC4Q9H5U6 513 aa16.51■□□□□ 0.23
COL18A1-204ENST00000400337 FBXO8Q9NRD0 319 aa16.51■□□□□ 0.23
COL18A1-204ENST00000400337 HRO43593 1189 aa16.51■□□□□ 0.23
COL18A1-204ENST00000400337 WNT3P56703 355 aa16.51■□□□□ 0.23
COL18A1-204ENST00000400337 BTG1P62324 171 aa16.51■□□□□ 0.23
COL18A1-204ENST00000400337 PPIAP62937 165 aaKnown RBP16.51■□□□□ 0.23
COL18A1-204ENST00000400337 DUSP2Q05923 314 aa16.51■□□□□ 0.23
COL18A1-204ENST00000400337 ASAH1Q13510 395 aa16.51■□□□□ 0.23
COL18A1-204ENST00000400337 OR51A2Q8NGJ7 313 aa16.51■□□□□ 0.23
COL18A1-204ENST00000400337 OR51F2Q8NH61 342 aa16.51■□□□□ 0.23
COL18A1-204ENST00000400337 TMEM43Q9BTV4 400 aa16.51■□□□□ 0.23
COL18A1-204ENST00000400337 CRLF2Q9HC73 371 aa16.51■□□□□ 0.23
COL18A1-204ENST00000400337 H7C1Q1 480 aa16.51■□□□□ 0.23
COL18A1-204ENST00000400337 POU3F3P20264 500 aaPredicted RBP16.51■□□□□ 0.23
COL18A1-204ENST00000400337 HBG1P69891 147 aa16.51■□□□□ 0.23
COL18A1-204ENST00000400337 HBG2P69892 147 aa16.51■□□□□ 0.23
COL18A1-204ENST00000400337 FOXF1Q12946 379 aa16.51■□□□□ 0.23
COL18A1-204ENST00000400337 MSRB3Q8IXL7 192 aa16.51■□□□□ 0.23
COL18A1-204ENST00000400337 YIPF6Q96EC8 236 aa16.51■□□□□ 0.23
COL18A1-204ENST00000400337 KCNE1BA0A087WTH5 132 aa16.51■□□□□ 0.23
COL18A1-204ENST00000400337 IGHV3-64DA0A0J9YX35 117 aa16.51■□□□□ 0.23
COL18A1-204ENST00000400337 PRKACAP17612 351 aa16.51■□□□□ 0.23
COL18A1-204ENST00000400337 RHOUQ7L0Q8 258 aa16.51■□□□□ 0.23
COL18A1-204ENST00000400337 DPPA2Q7Z7J5 298 aa16.51■□□□□ 0.23
COL18A1-204ENST00000400337 CCDC71Q8IV32 467 aaPredicted RBP16.51■□□□□ 0.23
COL18A1-204ENST00000400337 NUDT9Q9BW91 350 aa16.51■□□□□ 0.23
COL18A1-204ENST00000400337 ZNF732B4DXR9 585 aa16.5■□□□□ 0.23
COL18A1-204ENST00000400337 SPINT2O43291 252 aa16.5■□□□□ 0.23
COL18A1-204ENST00000400337 CTSVO60911 334 aa16.5■□□□□ 0.23
COL18A1-204ENST00000400337 SULT1C4O75897 302 aa16.5■□□□□ 0.23
COL18A1-204ENST00000400337 TNFSF15O95150 251 aa16.5■□□□□ 0.23
COL18A1-204ENST00000400337 GSTP1P09211 210 aaKnown RBP16.5■□□□□ 0.23
COL18A1-204ENST00000400337 NME1P15531 152 aaKnown RBP16.5■□□□□ 0.23
COL18A1-204ENST00000400337 ZNF74Q16587 644 aa16.5■□□□□ 0.23
COL18A1-204ENST00000400337 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.5■□□□□ 0.23
COL18A1-204ENST00000400337 OR1N1Q8NGS0 311 aa16.5■□□□□ 0.23
COL18A1-204ENST00000400337 FGF20Q9NP95 211 aaPredicted RBP16.5■□□□□ 0.23
COL18A1-204ENST00000400337 ASCC3Q8N3C0 2202 aaKnown RBP16.5■□□□□ 0.23
COL18A1-204ENST00000400337 HOXC8P31273 242 aa16.5■□□□□ 0.23
COL18A1-204ENST00000400337 ECI1P42126 302 aa16.5■□□□□ 0.23
COL18A1-204ENST00000400337 SLC17A1Q14916 467 aa16.5■□□□□ 0.23
COL18A1-204ENST00000400337 LGI3Q8N145 548 aa16.5■□□□□ 0.23
COL18A1-204ENST00000400337 HSD17B11Q8NBQ5 300 aa16.5■□□□□ 0.23
COL18A1-204ENST00000400337 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.5■□□□□ 0.23
COL18A1-204ENST00000400337 IP6K3Q96PC2 410 aa16.5■□□□□ 0.23
COL18A1-204ENST00000400337 TAS2R5Q9NYW4 299 aa16.5■□□□□ 0.23
COL18A1-204ENST00000400337 IFITM5A6NNB3 132 aa16.5■□□□□ 0.23
COL18A1-204ENST00000400337 PIAS2O75928 621 aa16.5■□□□□ 0.23
COL18A1-204ENST00000400337 ALOX5APP20292 161 aa16.5■□□□□ 0.23
COL18A1-204ENST00000400337 CLDN15P56746 228 aa16.5■□□□□ 0.23
COL18A1-204ENST00000400337 SLC22A25Q6T423 547 aa16.5■□□□□ 0.23
COL18A1-204ENST00000400337 GDPD3Q7L5L3 318 aa16.5■□□□□ 0.23
COL18A1-204ENST00000400337 ORAI1Q96D31 301 aa16.5■□□□□ 0.23
COL18A1-204ENST00000400337 TNFSF11O14788 317 aa16.5■□□□□ 0.23
COL18A1-204ENST00000400337 CYB5BO43169 146 aa16.5■□□□□ 0.23
COL18A1-204ENST00000400337 SCPEP1Q9HB40 452 aa16.5■□□□□ 0.23
COL18A1-204ENST00000400337 OXA1LQ15070 435 aa16.49■□□□□ 0.23
COL18A1-204ENST00000400337 PLPP5Q8NEB5 264 aa16.49■□□□□ 0.23
COL18A1-204ENST00000400337 OR52N5Q8NH56 324 aa16.49■□□□□ 0.23
COL18A1-204ENST00000400337 C11orf40Q8WZ69 217 aa16.49■□□□□ 0.23
COL18A1-204ENST00000400337 ATF6BQ99941 703 aa16.49■□□□□ 0.23
COL18A1-204ENST00000400337 RTL8AQ9BWD3 113 aa16.49■□□□□ 0.23
COL18A1-204ENST00000400337 BAXQ07812 192 aa16.49■□□□□ 0.23
COL18A1-204ENST00000400337 BRICD5Q6PL45 260 aa16.49■□□□□ 0.23
COL18A1-204ENST00000400337 SLC51BQ86UW2 128 aa16.49■□□□□ 0.23
COL18A1-204ENST00000400337 CMTM4Q8IZR5 234 aa16.49■□□□□ 0.23
COL18A1-204ENST00000400337 ARHGDIGQ99819 225 aa16.49■□□□□ 0.23
COL18A1-204ENST00000400337 EXO1Q9UQ84 846 aaKnown RBP16.49■□□□□ 0.23
COL18A1-204ENST00000400337 R4GMQ9 66 aa16.49■□□□□ 0.23
COL18A1-204ENST00000400337 CACNA1CQ13936 2221 aa16.49■□□□□ 0.23
COL18A1-204ENST00000400337 C5orf49A4QMS7 147 aa16.49■□□□□ 0.23
COL18A1-204ENST00000400337 EIF4EP06730 217 aaKnown RBP16.49■□□□□ 0.23
COL18A1-204ENST00000400337 AKR1C1Q04828 323 aa16.49■□□□□ 0.23
COL18A1-204ENST00000400337 TPBGQ13641 420 aa16.49■□□□□ 0.23
COL18A1-204ENST00000400337 SLCO1C1Q9NYB5 712 aa16.49■□□□□ 0.23
COL18A1-204ENST00000400337 TMEFF2Q9UIK5 374 aaPredicted RBP16.49■□□□□ 0.23
COL18A1-204ENST00000400337 SCN1AP35498 2009 aa16.49■□□□□ 0.23
COL18A1-204ENST00000400337 CROCCQ5TZA2 2017 aa16.49■□□□□ 0.23
COL18A1-204ENST00000400337 ZNF705FA8MVS1 300 aaPredicted RBP16.49■□□□□ 0.23
COL18A1-204ENST00000400337 C1QAP02745 245 aa16.49■□□□□ 0.23
COL18A1-204ENST00000400337 ZNF705DP0CH99 300 aaPredicted RBP16.49■□□□□ 0.23
COL18A1-204ENST00000400337 ZNF705BP0CI00 300 aaPredicted RBP16.49■□□□□ 0.23
COL18A1-204ENST00000400337 CD1EP15812 388 aa16.49■□□□□ 0.23
COL18A1-204ENST00000400337 BCKDHBP21953 392 aa16.49■□□□□ 0.23
COL18A1-204ENST00000400337 NFYBP25208 207 aa16.49■□□□□ 0.23
COL18A1-204ENST00000400337 SERPINF1P36955 418 aa16.49■□□□□ 0.23
COL18A1-204ENST00000400337 IL10RAQ13651 578 aa16.49■□□□□ 0.23
COL18A1-204ENST00000400337 FYTTD1Q96QD9 318 aaKnown RBP16.49■□□□□ 0.23
COL18A1-204ENST00000400337 C19orf12Q9NSK7 152 aa16.49■□□□□ 0.23
COL18A1-204ENST00000400337 UFSP2Q9NUQ7 469 aa16.49■□□□□ 0.23
COL18A1-204ENST00000400337 SIRT5Q9NXA8 310 aa16.49■□□□□ 0.23
COL18A1-204ENST00000400337 PRELID3BQ9Y3B1 194 aa16.49■□□□□ 0.23
COL18A1-204ENST00000400337 CHRNB4P30926 498 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 DDOSTP39656 456 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 AQP6Q13520 282 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 STAC2Q6ZMT1 411 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 DDOQ99489 341 aa16.48■□□□□ 0.23
COL18A1-204ENST00000400337 PUS1Q9Y606 427 aaKnown RBP eCLIP16.48■□□□□ 0.23
COL18A1-204ENST00000400337 M6PRP20645 277 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms