RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 ACOXLQ9NUZ1 547 aa8.12□□□□□ -1.11
PTPRM-202ENST00000400053 NECAP2Q9NVZ3 263 aa8.12□□□□□ -1.11
PTPRM-202ENST00000400053 SLC23A1Q9UHI7 598 aa8.12□□□□□ -1.11
PTPRM-202ENST00000400053 CD207Q9UJ71 328 aa8.12□□□□□ -1.11
PTPRM-202ENST00000400053 KCND3Q9UK17 655 aa8.12□□□□□ -1.11
PTPRM-202ENST00000400053 GAB2Q9UQC2 676 aa8.12□□□□□ -1.11
PTPRM-202ENST00000400053 TRAV36DV7A0A075B6V5 113 aa8.12□□□□□ -1.11
PTPRM-202ENST00000400053 OR6C76A6NM76 312 aa8.12□□□□□ -1.11
PTPRM-202ENST00000400053 H0YGG7 62 aa8.12□□□□□ -1.11
PTPRM-202ENST00000400053 FZD6O60353 706 aa8.12□□□□□ -1.11
PTPRM-202ENST00000400053 PRAMEF4O60810 478 aa8.12□□□□□ -1.11
PTPRM-202ENST00000400053 TSPAN12O95859 305 aa8.12□□□□□ -1.11
PTPRM-202ENST00000400053 FCER1GP30273 86 aa8.12□□□□□ -1.11
PTPRM-202ENST00000400053 SSR4P51571 173 aa8.12□□□□□ -1.11
PTPRM-202ENST00000400053 RAB38P57729 211 aa8.12□□□□□ -1.11
PTPRM-202ENST00000400053 CTBSQ01459 385 aa8.12□□□□□ -1.11
PTPRM-202ENST00000400053 FAM27D1Q5T7N8 215 aa8.12□□□□□ -1.11
PTPRM-202ENST00000400053 ZNF626Q68DY1 528 aa8.12□□□□□ -1.11
PTPRM-202ENST00000400053 TCTN3Q6NUS6 607 aa8.12□□□□□ -1.11
PTPRM-202ENST00000400053 FBXO46Q6PJ61 603 aaPredicted RBP8.12□□□□□ -1.11
PTPRM-202ENST00000400053 SLC25A43Q8WUT9 341 aaPredicted RBP8.12□□□□□ -1.11
PTPRM-202ENST00000400053 FGF13Q92913 245 aa8.12□□□□□ -1.11
PTPRM-202ENST00000400053 WBP2Q969T9 261 aa8.12□□□□□ -1.11
PTPRM-202ENST00000400053 PLPP1O14494 284 aa8.12□□□□□ -1.11
PTPRM-202ENST00000400053 IL10RAQ13651 578 aa8.12□□□□□ -1.11
PTPRM-202ENST00000400053 TMEM176BQ3YBM2 270 aaPredicted RBP8.12□□□□□ -1.11
PTPRM-202ENST00000400053 DPPA2Q7Z7J5 298 aa8.12□□□□□ -1.11
PTPRM-202ENST00000400053 CCDC190Q86UF4 302 aa8.12□□□□□ -1.11
PTPRM-202ENST00000400053 KLHDC1Q8N7A1 406 aa8.12□□□□□ -1.11
PTPRM-202ENST00000400053 OR51A4Q8NGJ6 313 aa8.12□□□□□ -1.11
PTPRM-202ENST00000400053 OR2AE1Q8NHA4 323 aa8.12□□□□□ -1.11
PTPRM-202ENST00000400053 REEP6Q96HR9 211 aa8.12□□□□□ -1.11
PTPRM-202ENST00000400053 JAM3Q9BX67 310 aa8.12□□□□□ -1.11
PTPRM-202ENST00000400053 SPHK1Q9NYA1 384 aa8.12□□□□□ -1.11
PTPRM-202ENST00000400053 TRBV5-4A0A0C4DH59 114 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 LOC100289279A0A1B0GTE1 492 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 KLRC4-KLRK1H3BQV0 150 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 GLAP06280 429 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 CD14P08571 375 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 SLC6A12P48065 614 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 RPL11P62913 178 aaKnown RBP8.11□□□□□ -1.11
PTPRM-202ENST00000400053 HES1Q14469 280 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 DCAF12Q5T6F0 453 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 TEX261Q6UWH6 196 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 BPIFCQ8NFQ6 507 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 ARRDC3Q96B67 414 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 BCO1Q9HAY6 547 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 TAF9BQ9HBM6 251 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 MMACHCQ9Y4U1 282 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 HCFC2Q9Y5Z7 792 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 U3KQ87 197 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 XIRP1Q702N8 1843 aaKnown RBP8.11□□□□□ -1.11
PTPRM-202ENST00000400053 SHROOM3Q8TF72 1996 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 KIAA1217Q5T5P2 1943 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 TMEM202A6NGA9 273 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 ST8SIA3O43173 380 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 GLCEO94923 617 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 ADRA2CP18825 462 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 ZNF385BQ569K4 471 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 CYHR1Q6ZMK1 362 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 OVCH1Q7RTY7 1134 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 CDH26Q8IXH8 852 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 SFT2D1Q8WV19 159 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 ORAI1Q96D31 301 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 FAM173AQ9BQD7 235 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 ZPBPQ9BS86 351 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 RIMS4Q9H426 269 aaPredicted RBP8.11□□□□□ -1.11
PTPRM-202ENST00000400053 AUNIPQ9H7T9 357 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 TAS2R5Q9NYW4 299 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 TAAR2Q9P1P5 351 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 FBXL4Q9UKA2 621 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 CSAG2Q9Y5P2 127 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 SLC5A10A0PJK1 596 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 CYTIPO60759 359 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 MBP02144 154 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 CD38P28907 300 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 BMI1P35226 326 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 MRPS21P82921 87 aaKnown RBP8.11□□□□□ -1.11
PTPRM-202ENST00000400053 GLYR1Q49A26 553 aaPredicted RBP8.11□□□□□ -1.11
PTPRM-202ENST00000400053 FAHD1Q6P587 224 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 PTOV1Q86YD1 416 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 CMTM4Q8IZR5 234 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 HSD17B8Q92506 261 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 OR2A14Q96R47 310 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 CSF3RQ99062 836 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 VPS25Q9BRG1 176 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 SPNS1Q9H2V7 528 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 OBP2AQ9NY56 170 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 ZFP92A6NM28 416 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 PHF1O43189 567 aaPredicted RBP8.11□□□□□ -1.11
PTPRM-202ENST00000400053 NME2P1O60361 137 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 TUSC2O75896 110 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 TOX4O94842 621 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 PDGFBP01127 241 aaPredicted RBP8.11□□□□□ -1.11
PTPRM-202ENST00000400053 THBS1P07996 1170 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 ACHEP22303 614 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 ZNF93P35789 620 aaPredicted RBP8.11□□□□□ -1.11
PTPRM-202ENST00000400053 MAT1AQ00266 395 aaKnown RBP8.11□□□□□ -1.11
PTPRM-202ENST00000400053 PHLDA2Q53GA4 152 aa8.11□□□□□ -1.11
PTPRM-202ENST00000400053 SLC35D3Q5M8T2 416 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms