RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 SYT4Q9H2B2 425 aa10.07□□□□□ -0.8
SMIM11A-201ENST00000399292 EMC7Q9NPA0 242 aa10.07□□□□□ -0.8
SMIM11A-201ENST00000399292 HINT3Q9NQE9 182 aaKnown RBP10.07□□□□□ -0.8
SMIM11A-201ENST00000399292 FAM53CQ9NYF3 392 aa10.07□□□□□ -0.8
SMIM11A-201ENST00000399292 ACTR3BQ9P1U1 418 aa10.07□□□□□ -0.8
SMIM11A-201ENST00000399292 FBN1P35555 2871 aaKnown RBP10.07□□□□□ -0.8
SMIM11A-201ENST00000399292 IMPA2O14732 288 aa10.06□□□□□ -0.8
SMIM11A-201ENST00000399292 TXNDC12O95881 172 aa10.06□□□□□ -0.8
SMIM11A-201ENST00000399292 IGHV3-13P01766 116 aa10.06□□□□□ -0.8
SMIM11A-201ENST00000399292 HPXP02790 462 aa10.06□□□□□ -0.8
SMIM11A-201ENST00000399292 COL8A2P25067 703 aa10.06□□□□□ -0.8
SMIM11A-201ENST00000399292 FPR3P25089 353 aa10.06□□□□□ -0.8
SMIM11A-201ENST00000399292 GCH1P30793 250 aa10.06□□□□□ -0.8
SMIM11A-201ENST00000399292 CDKN2AP42771 156 aaKnown RBP10.06□□□□□ -0.8
SMIM11A-201ENST00000399292 CHN2P52757 468 aa10.06□□□□□ -0.8
SMIM11A-201ENST00000399292 HMGA2P52926 109 aa10.06□□□□□ -0.8
SMIM11A-201ENST00000399292 SCRN3Q0VDG4 424 aa10.06□□□□□ -0.8
SMIM11A-201ENST00000399292 RIN1Q13671 783 aa10.06□□□□□ -0.8
SMIM11A-201ENST00000399292 MTX3Q5HYI7 312 aa10.06□□□□□ -0.8
SMIM11A-201ENST00000399292 ELFN2Q5R3F8 820 aa10.06□□□□□ -0.8
SMIM11A-201ENST00000399292 C1orf94Q6P1W5 598 aa10.06□□□□□ -0.8
SMIM11A-201ENST00000399292 GNPDA2Q8TDQ7 276 aa10.06□□□□□ -0.8
SMIM11A-201ENST00000399292 RDH5Q92781 318 aa10.06□□□□□ -0.8
SMIM11A-201ENST00000399292 C4orf45Q96LM5 186 aa10.06□□□□□ -0.8
SMIM11A-201ENST00000399292 ERMAPQ96PL5 475 aaPredicted RBP10.06□□□□□ -0.8
SMIM11A-201ENST00000399292 NUAK2Q9H093 628 aa10.06□□□□□ -0.8
SMIM11A-201ENST00000399292 ELOVL3Q9HB03 270 aa10.06□□□□□ -0.8
SMIM11A-201ENST00000399292 VSX1Q9NZR4 365 aaPredicted RBP10.06□□□□□ -0.8
SMIM11A-201ENST00000399292 NDRG4Q9ULP0 352 aaKnown RBP10.06□□□□□ -0.8
SMIM11A-201ENST00000399292 COA3Q9Y2R0 106 aaPredicted RBP10.06□□□□□ -0.8
SMIM11A-201ENST00000399292 ABCA1O95477 2261 aa10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 LRP5LA4QPB2 252 aa10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 C17orf100A8MU93 164 aa10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 LMX1BO60663 402 aa10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 MPZL1O95297 269 aa10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 PPP1R3DO95685 299 aa10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 TACSTD2P09758 323 aa10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 T-ENOLP0DO92 83 aa10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 COX5BP10606 129 aa10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 ACHEP22303 614 aa10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 CRABP1P29762 137 aa10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 SLC6A6P31641 620 aa10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 WNT5AP41221 380 aa10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 CENPAP49450 140 aa10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 ARHGDIAP52565 204 aa10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 TMEM33P57088 247 aa10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 LSM6P62312 80 aaKnown RBP10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 MRPS11P82912 194 aaKnown RBP10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 TSPAN31Q12999 210 aa10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 TRIM25Q14258 630 aaKnown RBP10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 KCNMB1Q16558 191 aa10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 PCGF3Q3KNV8 242 aa10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 CHRFAM7AQ494W8 412 aa10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 SPATA46Q5T0L3 261 aa10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 DNM1P34Q6PK57 102 aa10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 RINLQ6ZS11 566 aa10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 PTCHD4Q6ZW05 846 aa10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 DHFR2Q86XF0 187 aa10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 ZNF101Q8IZC7 436 aa10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 LINC00471Q8N535 108 aa10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 ABHD4Q8TB40 342 aa10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 FANK1Q8TC84 345 aa10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 KLF14Q8TD94 323 aaPredicted RBP10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 POP5Q969H6 163 aaKnown RBP10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 MSI2Q96DH6 328 aaKnown RBP10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 MARS2Q96GW9 593 aaKnown RBP10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 SAMD8Q96LT4 415 aa10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 IFT27Q9BW83 186 aa10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 BEX2Q9BXY8 128 aa10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 OR2J1Q9GZK6 312 aa10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 OR52D1Q9H346 318 aa10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 MUC13Q9H3R2 512 aa10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 CHODLQ9H9P2 273 aa10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 CDC42EP3Q9UKI2 254 aa10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 COL6A5A8TX70 2615 aa10.05□□□□□ -0.8
SMIM11A-201ENST00000399292 CR1P17927 2039 aa10.04□□□□□ -0.8
SMIM11A-201ENST00000399292 SONP18583 2426 aaKnown RBP10.04□□□□□ -0.8
SMIM11A-201ENST00000399292 PLSCR5A0PG75 271 aa10.04□□□□□ -0.8
SMIM11A-201ENST00000399292 TNFRSF11BO00300 401 aa10.04□□□□□ -0.8
SMIM11A-201ENST00000399292 ARPC3O15145 178 aa10.04□□□□□ -0.8
SMIM11A-201ENST00000399292 TPD52L2O43399 206 aaKnown RBP10.04□□□□□ -0.8
SMIM11A-201ENST00000399292 SGCEO43556 437 aa10.04□□□□□ -0.8
SMIM11A-201ENST00000399292 IDH3BO43837 385 aa10.04□□□□□ -0.8
SMIM11A-201ENST00000399292 RENP00797 406 aa10.04□□□□□ -0.8
SMIM11A-201ENST00000399292 TGFAP01135 160 aa10.04□□□□□ -0.8
SMIM11A-201ENST00000399292 NGFP01138 241 aa10.04□□□□□ -0.8
SMIM11A-201ENST00000399292 IFNA2P01563 188 aa10.04□□□□□ -0.8
SMIM11A-201ENST00000399292 ATP6V1B2P21281 511 aa10.04□□□□□ -0.8
SMIM11A-201ENST00000399292 MAGEB1P43366 347 aa10.04□□□□□ -0.8
SMIM11A-201ENST00000399292 GPR6P46095 362 aaPredicted RBP10.04□□□□□ -0.8
SMIM11A-201ENST00000399292 GSSP48637 474 aa10.04□□□□□ -0.8
SMIM11A-201ENST00000399292 ZNF81P51508 661 aa10.04□□□□□ -0.8
SMIM11A-201ENST00000399292 PPP1CBP62140 327 aa10.04□□□□□ -0.8
SMIM11A-201ENST00000399292 CCL8P80075 99 aa10.04□□□□□ -0.8
SMIM11A-201ENST00000399292 AQP6Q13520 282 aa10.04□□□□□ -0.8
SMIM11A-201ENST00000399292 MBNL2Q5VZF2 373 aaKnown RBP10.04□□□□□ -0.8
SMIM11A-201ENST00000399292 FAM166AQ6J272 317 aa10.04□□□□□ -0.8
SMIM11A-201ENST00000399292 LEG1Q6P5S2 330 aa10.04□□□□□ -0.8
SMIM11A-201ENST00000399292 JAZF1Q86VZ6 243 aa10.04□□□□□ -0.8
SMIM11A-201ENST00000399292 SLC25A40Q8TBP6 338 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms