RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 DIRC2Q96SL1 478 aa11.41□□□□□ -0.58
VCX3A-202ENST00000398729 EGLN1Q9GZT9 426 aa11.41□□□□□ -0.58
VCX3A-202ENST00000398729 NUAK2Q9H093 628 aa11.41□□□□□ -0.58
VCX3A-202ENST00000398729 OR52D1Q9H346 318 aa11.41□□□□□ -0.58
VCX3A-202ENST00000398729 TUBG2Q9NRH3 451 aa11.41□□□□□ -0.58
VCX3A-202ENST00000398729 TREM2Q9NZC2 230 aa11.41□□□□□ -0.58
VCX3A-202ENST00000398729 ASH2LQ9UBL3 628 aa11.41□□□□□ -0.58
VCX3A-202ENST00000398729 ZDHHC8Q9ULC8 765 aa11.41□□□□□ -0.58
VCX3A-202ENST00000398729 POLR1DQ9Y2S0 133 aa11.41□□□□□ -0.58
VCX3A-202ENST00000398729 TGP01266 2768 aa11.4□□□□□ -0.58
VCX3A-202ENST00000398729 ZSCAN5BA6NJL1 495 aa11.4□□□□□ -0.58
VCX3A-202ENST00000398729 CLDN25C9JDP6 229 aa11.4□□□□□ -0.58
VCX3A-202ENST00000398729 WNT9BO14905 357 aa11.4□□□□□ -0.58
VCX3A-202ENST00000398729 TIMM8AO60220 97 aaPredicted RBP11.4□□□□□ -0.58
VCX3A-202ENST00000398729 RENP00797 406 aa11.4□□□□□ -0.58
VCX3A-202ENST00000398729 ADH4P08319 380 aa11.4□□□□□ -0.58
VCX3A-202ENST00000398729 GAAP10253 952 aa11.4□□□□□ -0.58
VCX3A-202ENST00000398729 MVKQ03426 396 aa11.4□□□□□ -0.58
VCX3A-202ENST00000398729 KCNMB1Q16558 191 aa11.4□□□□□ -0.58
VCX3A-202ENST00000398729 AVPI1Q5T686 147 aa11.4□□□□□ -0.58
VCX3A-202ENST00000398729 OTPQ5XKR4 325 aa11.4□□□□□ -0.58
VCX3A-202ENST00000398729 JAZF1Q86VZ6 243 aa11.4□□□□□ -0.58
VCX3A-202ENST00000398729 TIMD4Q96H15 378 aa11.4□□□□□ -0.58
VCX3A-202ENST00000398729 COG8Q96MW5 612 aa11.4□□□□□ -0.58
VCX3A-202ENST00000398729 KLHL21Q9UJP4 597 aa11.4□□□□□ -0.58
VCX3A-202ENST00000398729 GRIP1Q9Y3R0 1128 aa11.4□□□□□ -0.58
VCX3A-202ENST00000398729 FAM157AC9JC47 383 aa11.39□□□□□ -0.59
VCX3A-202ENST00000398729 ARPC3O15145 178 aa11.39□□□□□ -0.59
VCX3A-202ENST00000398729 KRT36O76013 467 aa11.39□□□□□ -0.59
VCX3A-202ENST00000398729 MSMBP08118 114 aa11.39□□□□□ -0.59
VCX3A-202ENST00000398729 ANPEPP15144 967 aa11.39□□□□□ -0.59
VCX3A-202ENST00000398729 NOS3P29474 1203 aa11.39□□□□□ -0.59
VCX3A-202ENST00000398729 SRP14P37108 136 aaKnown RBP11.39□□□□□ -0.59
VCX3A-202ENST00000398729 GSSP48637 474 aa11.39□□□□□ -0.59
VCX3A-202ENST00000398729 LMO4P61968 165 aa11.39□□□□□ -0.59
VCX3A-202ENST00000398729 SLC3A1Q07837 685 aa11.39□□□□□ -0.59
VCX3A-202ENST00000398729 PSG7Q13046 419 aa11.39□□□□□ -0.59
VCX3A-202ENST00000398729 MTX3Q5HYI7 312 aa11.39□□□□□ -0.59
VCX3A-202ENST00000398729 C1orf94Q6P1W5 598 aa11.39□□□□□ -0.59
VCX3A-202ENST00000398729 LEG1Q6P5S2 330 aa11.39□□□□□ -0.59
VCX3A-202ENST00000398729 FITM2Q8N6M3 262 aa11.39□□□□□ -0.59
VCX3A-202ENST00000398729 OR1F12Q8NHA8 337 aa11.39□□□□□ -0.59
VCX3A-202ENST00000398729 GNPDA2Q8TDQ7 276 aa11.39□□□□□ -0.59
VCX3A-202ENST00000398729 CCL17Q92583 94 aa11.39□□□□□ -0.59
VCX3A-202ENST00000398729 RAB1CQ92928 201 aa11.39□□□□□ -0.59
VCX3A-202ENST00000398729 TMEM186Q96B77 213 aa11.39□□□□□ -0.59
VCX3A-202ENST00000398729 NSL1Q96IY1 281 aa11.39□□□□□ -0.59
VCX3A-202ENST00000398729 SAMD8Q96LT4 415 aa11.39□□□□□ -0.59
VCX3A-202ENST00000398729 TSSK2Q96PF2 358 aa11.39□□□□□ -0.59
VCX3A-202ENST00000398729 CCT8L2Q96SF2 557 aa11.39□□□□□ -0.59
VCX3A-202ENST00000398729 NMNAT3Q96T66 252 aa11.39□□□□□ -0.59
VCX3A-202ENST00000398729 IFT27Q9BW83 186 aa11.39□□□□□ -0.59
VCX3A-202ENST00000398729 MSL2Q9HCI7 577 aa11.39□□□□□ -0.59
VCX3A-202ENST00000398729 HIF1ANQ9NWT6 349 aa11.39□□□□□ -0.59
VCX3A-202ENST00000398729 ACTR3BQ9P1U1 418 aa11.39□□□□□ -0.59
VCX3A-202ENST00000398729 ATPIF1Q9UII2 106 aa11.39□□□□□ -0.59
VCX3A-202ENST00000398729 CACNG2Q9Y698 323 aa11.39□□□□□ -0.59
VCX3A-202ENST00000398729 OR6C6A6NF89 314 aa11.38□□□□□ -0.59
VCX3A-202ENST00000398729 B2RBV5 119 aa11.38□□□□□ -0.59
VCX3A-202ENST00000398729 DCTN6O00399 190 aa11.38□□□□□ -0.59
VCX3A-202ENST00000398729 RER1O15258 196 aa11.38□□□□□ -0.59
VCX3A-202ENST00000398729 IDH3BO43837 385 aa11.38□□□□□ -0.59
VCX3A-202ENST00000398729 CD55P08174 381 aa11.38□□□□□ -0.59
VCX3A-202ENST00000398729 HIST1H1CP16403 213 aaKnown RBP11.38□□□□□ -0.59
VCX3A-202ENST00000398729 TSPAN31Q12999 210 aa11.38□□□□□ -0.59
VCX3A-202ENST00000398729 CCDC92Q53HC0 331 aaPredicted RBP11.38□□□□□ -0.59
VCX3A-202ENST00000398729 CYP2R1Q6VVX0 501 aa11.38□□□□□ -0.59
VCX3A-202ENST00000398729 RINLQ6ZS11 566 aa11.38□□□□□ -0.59
VCX3A-202ENST00000398729 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.38□□□□□ -0.59
VCX3A-202ENST00000398729 OR6V1Q8N148 313 aa11.38□□□□□ -0.59
VCX3A-202ENST00000398729 ARHGAP24Q8N264 748 aa11.38□□□□□ -0.59
VCX3A-202ENST00000398729 GJC3Q8NFK1 279 aa11.38□□□□□ -0.59
VCX3A-202ENST00000398729 OR5L1Q8NGL2 311 aa11.38□□□□□ -0.59
VCX3A-202ENST00000398729 OR4K13Q8NH42 304 aa11.38□□□□□ -0.59
VCX3A-202ENST00000398729 OR51F2Q8NH61 342 aa11.38□□□□□ -0.59
VCX3A-202ENST00000398729 SLC7A6Q92536 515 aa11.38□□□□□ -0.59
VCX3A-202ENST00000398729 RAB39BQ96DA2 213 aa11.38□□□□□ -0.59
VCX3A-202ENST00000398729 DCLRE1CQ96SD1 692 aaKnown RBP11.38□□□□□ -0.59
VCX3A-202ENST00000398729 ZNF665Q9H7R5 613 aa11.38□□□□□ -0.59
VCX3A-202ENST00000398729 LPAR2Q9HBW0 351 aa11.38□□□□□ -0.59
VCX3A-202ENST00000398729 SRA1Q9HD15 236 aaKnown RBP11.38□□□□□ -0.59
VCX3A-202ENST00000398729 PURGQ9UJV8 347 aaKnown RBP11.38□□□□□ -0.59
VCX3A-202ENST00000398729 B9D1Q9UPM9 204 aa11.38□□□□□ -0.59
VCX3A-202ENST00000398729 STARD10Q9Y365 291 aa11.38□□□□□ -0.59
VCX3A-202ENST00000398729 WIPI2Q9Y4P8 454 aa11.38□□□□□ -0.59
VCX3A-202ENST00000398729 IGLV1-36A0A0B4J1U3 117 aa11.37□□□□□ -0.59
VCX3A-202ENST00000398729 TRAV20A0A0B4J274 112 aa11.37□□□□□ -0.59
VCX3A-202ENST00000398729 J3QW42 95 aa11.37□□□□□ -0.59
VCX3A-202ENST00000398729 TNFRSF11BO00300 401 aa11.37□□□□□ -0.59
VCX3A-202ENST00000398729 UBOX5O94941 541 aa11.37□□□□□ -0.59
VCX3A-202ENST00000398729 GPANK1O95872 356 aa11.37□□□□□ -0.59
VCX3A-202ENST00000398729 KITLGP21583 273 aa11.37□□□□□ -0.59
VCX3A-202ENST00000398729 TNFSF4P23510 183 aa11.37□□□□□ -0.59
VCX3A-202ENST00000398729 RGS6P49758 472 aa11.37□□□□□ -0.59
VCX3A-202ENST00000398729 HMGA2P52926 109 aa11.37□□□□□ -0.59
VCX3A-202ENST00000398729 TNFAIP6P98066 277 aaPredicted RBP11.37□□□□□ -0.59
VCX3A-202ENST00000398729 CDK5R2Q13319 367 aa11.37□□□□□ -0.59
VCX3A-202ENST00000398729 MEP1BQ16820 701 aa11.37□□□□□ -0.59
VCX3A-202ENST00000398729 ACSM5Q6NUN0 579 aa11.37□□□□□ -0.59
VCX3A-202ENST00000398729 RPL13AP3Q6NVV1 102 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms