RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 GLRA1P23415 457 aa12.97□□□□□ -0.33
PCDHA11-201ENST00000398640 OR1C1Q15619 314 aa12.97□□□□□ -0.33
PCDHA11-201ENST00000398640 OR2B11Q5JQS5 317 aa12.97□□□□□ -0.33
PCDHA11-201ENST00000398640 DPPA2Q7Z7J5 298 aa12.97□□□□□ -0.33
PCDHA11-201ENST00000398640 TMEM43Q9BTV4 400 aa12.97□□□□□ -0.33
PCDHA11-201ENST00000398640 CLEC2DQ9UHP7 191 aa12.97□□□□□ -0.33
PCDHA11-201ENST00000398640 RPS10-NUDT3A0A1W2PQS6 291 aa12.96□□□□□ -0.33
PCDHA11-201ENST00000398640 RPS10P46783 165 aaKnown RBP12.96□□□□□ -0.33
PCDHA11-201ENST00000398640 UCNP55089 124 aa12.96□□□□□ -0.33
PCDHA11-201ENST00000398640 ZMAT1Q5H9K5 638 aa12.96□□□□□ -0.33
PCDHA11-201ENST00000398640 CMTM2Q8TAZ6 248 aa12.96□□□□□ -0.33
PCDHA11-201ENST00000398640 DAPP1Q9UN19 280 aa12.96□□□□□ -0.33
PCDHA11-201ENST00000398640 OR6C65A6NJZ3 312 aa12.96□□□□□ -0.33
PCDHA11-201ENST00000398640 FGF17O60258 216 aa12.96□□□□□ -0.33
PCDHA11-201ENST00000398640 GLCEO94923 617 aa12.96□□□□□ -0.33
PCDHA11-201ENST00000398640 FBXL14Q8N1E6 418 aa12.96□□□□□ -0.33
PCDHA11-201ENST00000398640 GPBAR1Q8TDU6 330 aa12.96□□□□□ -0.33
PCDHA11-201ENST00000398640 UBE2FQ969M7 185 aa12.96□□□□□ -0.33
PCDHA11-201ENST00000398640 OR11A1Q9GZK7 315 aa12.96□□□□□ -0.33
PCDHA11-201ENST00000398640 PSORS1C1Q9UIG5 152 aa12.96□□□□□ -0.33
PCDHA11-201ENST00000398640 SLC5A6Q9Y289 635 aa12.96□□□□□ -0.33
PCDHA11-201ENST00000398640 SCG5P05408 212 aa12.96□□□□□ -0.33
PCDHA11-201ENST00000398640 NAGAP17050 411 aa12.96□□□□□ -0.33
PCDHA11-201ENST00000398640 HOXD11P31277 338 aaPredicted RBP12.96□□□□□ -0.33
PCDHA11-201ENST00000398640 KIR2DL1P43626 348 aaPredicted RBP12.96□□□□□ -0.33
PCDHA11-201ENST00000398640 PPT1P50897 306 aa12.96□□□□□ -0.33
PCDHA11-201ENST00000398640 FABP6P51161 128 aa12.96□□□□□ -0.33
PCDHA11-201ENST00000398640 LPCAT3Q6P1A2 487 aa12.96□□□□□ -0.33
PCDHA11-201ENST00000398640 OR10J5Q8NHC4 309 aa12.96□□□□□ -0.33
PCDHA11-201ENST00000398640 SLC25A43Q8WUT9 341 aaPredicted RBP12.96□□□□□ -0.33
PCDHA11-201ENST00000398640 KISS1RQ969F8 398 aaPredicted RBP12.96□□□□□ -0.33
PCDHA11-201ENST00000398640 PDCD1LG2Q9BQ51 273 aa12.96□□□□□ -0.33
PCDHA11-201ENST00000398640 PPP1R3CQ9UQK1 317 aa12.96□□□□□ -0.33
PCDHA11-201ENST00000398640 IGHV1OR21-1A0A087WYE8 117 aa12.96□□□□□ -0.34
PCDHA11-201ENST00000398640 OR2W5A6NFC9 320 aa12.96□□□□□ -0.34
PCDHA11-201ENST00000398640 PPM1DO15297 605 aa12.96□□□□□ -0.34
PCDHA11-201ENST00000398640 FZD6O60353 706 aa12.96□□□□□ -0.34
PCDHA11-201ENST00000398640 CLEC2LP0C7M8 214 aa12.96□□□□□ -0.34
PCDHA11-201ENST00000398640 HLA-DOBP13765 273 aa12.96□□□□□ -0.34
PCDHA11-201ENST00000398640 SRMP19623 302 aa12.96□□□□□ -0.34
PCDHA11-201ENST00000398640 CCR6P51684 374 aa12.96□□□□□ -0.34
PCDHA11-201ENST00000398640 ZNF766Q5HY98 468 aa12.96□□□□□ -0.34
PCDHA11-201ENST00000398640 PRSS45Q7RTY3 260 aa12.96□□□□□ -0.34
PCDHA11-201ENST00000398640 SLC43A2Q8N370 569 aa12.96□□□□□ -0.34
PCDHA11-201ENST00000398640 CHST11Q9NPF2 352 aa12.96□□□□□ -0.34
PCDHA11-201ENST00000398640 LOC100289279A0A1B0GTE1 492 aa12.96□□□□□ -0.34
PCDHA11-201ENST00000398640 PAPLNO95428 1278 aa12.96□□□□□ -0.34
PCDHA11-201ENST00000398640 SFTPCP11686 197 aa12.96□□□□□ -0.34
PCDHA11-201ENST00000398640 STEAP1BQ6NZ63 245 aa12.96□□□□□ -0.34
PCDHA11-201ENST00000398640 CA13Q8N1Q1 262 aa12.96□□□□□ -0.34
PCDHA11-201ENST00000398640 STACQ99469 402 aa12.96□□□□□ -0.34
PCDHA11-201ENST00000398640 TXN2Q99757 166 aa12.96□□□□□ -0.34
PCDHA11-201ENST00000398640 ONECUT1Q9UBC0 465 aa12.96□□□□□ -0.34
PCDHA11-201ENST00000398640 A0A1W2PR48 441 aa12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 TSPAN12O95859 305 aa12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 FPR3P25089 353 aa12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 HNRNPFP52597 415 aaKnown RBP12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 NAA40Q86UY6 237 aa12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 DRAXINQ8NBI3 349 aaPredicted RBP12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 OR51E1Q8TCB6 317 aa12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 TAS2R4Q9NYW5 299 aa12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 MTCH1Q9NZJ7 389 aa12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 TBXA2RP21731 343 aa12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 LYPD8Q6UX82 237 aa12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 OR2M2Q96R28 347 aa12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 AGAP14A8MT82 685 aa12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 MOSPD3O75425 235 aa12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 MT-ATP6P00846 226 aa12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 IGFBP1P08833 259 aaPredicted RBP12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 FAM219BQ5XKK7 198 aa12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 TCTN3Q6NUS6 607 aa12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 ZNF439Q8NDP4 499 aa12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 PLPP5Q8NEB5 264 aa12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 TRMT61AQ96FX7 289 aaKnown RBP12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 SMCO4Q9NRQ5 59 aa12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 ZNF816-ZNF321PA0A0X1KG74 233 aa12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 CLDN24A6NM45 220 aa12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 EIF4E2O60573 245 aaKnown RBP12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 CD82P27701 267 aa12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 ADGRE4PQ86SQ3 457 aa12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 CATSPERDQ86XM0 798 aa12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 EGFL6Q8IUX8 553 aa12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 ZNF321PQ8N8H1 164 aa12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 SMAP2Q8WU79 429 aaPredicted RBP12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 UBQLN3Q9H347 655 aa12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 ACOXLQ9NUZ1 547 aa12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 COL11A1P12107 1806 aaPredicted RBP12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 GFYI3L273 518 aa12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 PDGFBP01127 241 aaPredicted RBP12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 MMP11P24347 488 aa12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 ARR3P36575 388 aa12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 KCNJ8Q15842 424 aa12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 H2BFWTQ7Z2G1 175 aa12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 ZNF75AQ96N20 296 aa12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 ARPC5LQ9BPX5 153 aa12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 POFUT1Q9H488 388 aa12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 PLK3Q9H4B4 646 aa12.95□□□□□ -0.34
PCDHA11-201ENST00000398640 TRAV17A0A0B4J275 112 aa12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 SPRY3O43610 288 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms