RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 SLC29A4Q7RTT9 530 aa14.4□□□□□ -0.1
CHMP1A-201ENST00000397901 BIVMQ86UB2 503 aa14.4□□□□□ -0.1
CHMP1A-201ENST00000397901 EXD3Q8N9H8 876 aa14.4□□□□□ -0.1
CHMP1A-201ENST00000397901 CLCC1Q96S66 551 aa14.4□□□□□ -0.1
CHMP1A-201ENST00000397901 MAP3K3Q99759 626 aa14.4□□□□□ -0.1
CHMP1A-201ENST00000397901 NAA11Q9BSU3 229 aaPredicted RBP14.4□□□□□ -0.1
CHMP1A-201ENST00000397901 CDV3Q9UKY7 258 aaKnown RBP14.4□□□□□ -0.1
CHMP1A-201ENST00000397901 A0A0J9YY10 115 aa14.39□□□□□ -0.11
CHMP1A-201ENST00000397901 AP4M1O00189 453 aa14.39□□□□□ -0.11
CHMP1A-201ENST00000397901 OIP5O43482 229 aa14.39□□□□□ -0.11
CHMP1A-201ENST00000397901 SLC34A2O95436 690 aa14.39□□□□□ -0.11
CHMP1A-201ENST00000397901 LY86O95711 162 aa14.39□□□□□ -0.11
CHMP1A-201ENST00000397901 CT45A8P0DMV1 189 aa14.39□□□□□ -0.11
CHMP1A-201ENST00000397901 CT45A9P0DMV2 189 aa14.39□□□□□ -0.11
CHMP1A-201ENST00000397901 TPT1P13693 172 aaKnown RBP14.39□□□□□ -0.11
CHMP1A-201ENST00000397901 DLX2Q07687 328 aaPredicted RBP14.39□□□□□ -0.11
CHMP1A-201ENST00000397901 ZNF74Q16587 644 aa14.39□□□□□ -0.11
CHMP1A-201ENST00000397901 ISXQ2M1V0 245 aa14.39□□□□□ -0.11
CHMP1A-201ENST00000397901 CT45A2Q5DJT8 189 aa14.39□□□□□ -0.11
CHMP1A-201ENST00000397901 UNQ6126/PRO20091Q6UXV3 157 aa14.39□□□□□ -0.11
CHMP1A-201ENST00000397901 NDUFAF7Q7L592 441 aa14.39□□□□□ -0.11
CHMP1A-201ENST00000397901 CDC20BQ86Y33 519 aa14.39□□□□□ -0.11
CHMP1A-201ENST00000397901 GPX7Q96SL4 187 aaPredicted RBP14.39□□□□□ -0.11
CHMP1A-201ENST00000397901 G6PC3Q9BUM1 346 aa14.39□□□□□ -0.11
CHMP1A-201ENST00000397901 COMMD4Q9H0A8 199 aa14.39□□□□□ -0.11
CHMP1A-201ENST00000397901 MSRAQ9UJ68 235 aa14.39□□□□□ -0.11
CHMP1A-201ENST00000397901 C9orf170A2RU37 121 aa14.39□□□□□ -0.11
CHMP1A-201ENST00000397901 SMAD9O15198 467 aaKnown RBP14.39□□□□□ -0.11
CHMP1A-201ENST00000397901 GMFGO60234 142 aa14.39□□□□□ -0.11
CHMP1A-201ENST00000397901 CD3DP04234 171 aa14.39□□□□□ -0.11
CHMP1A-201ENST00000397901 ITGB2P05107 769 aa14.39□□□□□ -0.11
CHMP1A-201ENST00000397901 POU3F4P49335 361 aa14.39□□□□□ -0.11
CHMP1A-201ENST00000397901 SLC25A1P53007 311 aa14.39□□□□□ -0.11
CHMP1A-201ENST00000397901 F2RL1P55085 397 aa14.39□□□□□ -0.11
CHMP1A-201ENST00000397901 BTG2P78543 158 aa14.39□□□□□ -0.11
CHMP1A-201ENST00000397901 TFF2Q03403 129 aa14.39□□□□□ -0.11
CHMP1A-201ENST00000397901 ALG11Q2TAA5 492 aa14.39□□□□□ -0.11
CHMP1A-201ENST00000397901 OR52W1Q6IF63 320 aa14.39□□□□□ -0.11
CHMP1A-201ENST00000397901 PRSS35Q8N3Z0 413 aa14.39□□□□□ -0.11
CHMP1A-201ENST00000397901 INO80EQ8NBZ0 244 aaPredicted RBP14.39□□□□□ -0.11
CHMP1A-201ENST00000397901 OR5AP2Q8NGF4 316 aa14.39□□□□□ -0.11
CHMP1A-201ENST00000397901 TSEN15Q8WW01 171 aaKnown RBP14.39□□□□□ -0.11
CHMP1A-201ENST00000397901 CPNE4Q96A23 557 aaPredicted RBP14.39□□□□□ -0.11
CHMP1A-201ENST00000397901 CPNE2Q96FN4 548 aaPredicted RBP14.39□□□□□ -0.11
CHMP1A-201ENST00000397901 FOXN4Q96NZ1 517 aa14.39□□□□□ -0.11
CHMP1A-201ENST00000397901 ELF4Q99607 663 aaPredicted RBP14.39□□□□□ -0.11
CHMP1A-201ENST00000397901 SLC31A2O15432 143 aa14.38□□□□□ -0.11
CHMP1A-201ENST00000397901 PPIHO43447 177 aaKnown RBP14.38□□□□□ -0.11
CHMP1A-201ENST00000397901 CD74P04233 296 aa14.38□□□□□ -0.11
CHMP1A-201ENST00000397901 MELTFP08582 738 aa14.38□□□□□ -0.11
CHMP1A-201ENST00000397901 HOXB2P14652 356 aa14.38□□□□□ -0.11
CHMP1A-201ENST00000397901 CSRP1P21291 193 aaKnown RBP14.38□□□□□ -0.11
CHMP1A-201ENST00000397901 RAB5CP51148 216 aa14.38□□□□□ -0.11
CHMP1A-201ENST00000397901 RELQ04864 619 aaPredicted RBP14.38□□□□□ -0.11
CHMP1A-201ENST00000397901 ATXN7L3Q14CW9 347 aaPredicted RBP14.38□□□□□ -0.11
CHMP1A-201ENST00000397901 LRRC37A5PQ49AS3 106 aa14.38□□□□□ -0.11
CHMP1A-201ENST00000397901 TMEM244Q5VVB8 128 aa14.38□□□□□ -0.11
CHMP1A-201ENST00000397901 NKAIN2Q5VXU1 208 aa14.38□□□□□ -0.11
CHMP1A-201ENST00000397901 ANKRD16Q6P6B7 361 aa14.38□□□□□ -0.11
CHMP1A-201ENST00000397901 ZNF595Q8IYB9 648 aa14.38□□□□□ -0.11
CHMP1A-201ENST00000397901 C16orf52Q8NHV5 167 aa14.38□□□□□ -0.11
CHMP1A-201ENST00000397901 ZNF417Q8TAU3 575 aa14.38□□□□□ -0.11
CHMP1A-201ENST00000397901 AMELYQ99218 206 aa14.38□□□□□ -0.11
CHMP1A-201ENST00000397901 TOLLIPQ9H0E2 274 aa14.38□□□□□ -0.11
CHMP1A-201ENST00000397901 FBRSQ9HAH7 460 aa14.38□□□□□ -0.11
CHMP1A-201ENST00000397901 GRHPRQ9UBQ7 328 aa14.38□□□□□ -0.11
CHMP1A-201ENST00000397901 GTF2A1LQ9UNN4 478 aa14.38□□□□□ -0.11
CHMP1A-201ENST00000397901 HIF3AQ9Y2N7 669 aa14.38□□□□□ -0.11
CHMP1A-201ENST00000397901 TRBV5-7A0A0A0MS05 114 aa14.38□□□□□ -0.11
CHMP1A-201ENST00000397901 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.38□□□□□ -0.11
CHMP1A-201ENST00000397901 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.38□□□□□ -0.11
CHMP1A-201ENST00000397901 TAS2R60P59551 318 aa14.38□□□□□ -0.11
CHMP1A-201ENST00000397901 CD226Q15762 336 aa14.38□□□□□ -0.11
CHMP1A-201ENST00000397901 MESTQ5EB52 335 aa14.38□□□□□ -0.11
CHMP1A-201ENST00000397901 CBLN3Q6UW01 205 aa14.38□□□□□ -0.11
CHMP1A-201ENST00000397901 LRRC75AQ8NAA5 344 aa14.38□□□□□ -0.11
CHMP1A-201ENST00000397901 GPR148Q8TDV2 347 aa14.38□□□□□ -0.11
CHMP1A-201ENST00000397901 PIK3IP1Q96FE7 263 aa14.38□□□□□ -0.11
CHMP1A-201ENST00000397901 C14orf144Q96I85 54 aa14.38□□□□□ -0.11
CHMP1A-201ENST00000397901 F8VVB4 439 aa14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 F8VWA3 439 aa14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 KLF8O95600 359 aaPredicted RBP14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 CD2P06729 351 aa14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 ITGA5P08648 1049 aa14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 IFI6P09912 130 aa14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 ST6GAL1P15907 406 aa14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 MAOAP21397 527 aa14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 CPT2P23786 658 aa14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 CTHP32929 405 aa14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 RPL18Q07020 188 aaKnown RBP14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 ZNF542PQ5EBM4 170 aa14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 OR10K2Q6IF99 312 aa14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 FRMD1Q8N878 549 aa14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 SLC30A7Q8NEW0 376 aa14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 PPP1R1CQ8WVI7 109 aa14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 DGAT2Q96PD7 388 aa14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 TSPAN32Q96QS1 320 aa14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 LPAR4Q99677 370 aa14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 OCSTAMPQ9BR26 566 aa14.37□□□□□ -0.11
CHMP1A-201ENST00000397901 TWSG1Q9GZX9 223 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms