RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 SYNGR3O43761 229 aa16.93■□□□□ 0.3
MAP1LC3A-203ENST00000397709 DOK2O60496 412 aa16.93■□□□□ 0.3
MAP1LC3A-203ENST00000397709 ZNF14P17017 642 aaPredicted RBP16.93■□□□□ 0.3
MAP1LC3A-203ENST00000397709 DCKP27707 260 aa16.93■□□□□ 0.3
MAP1LC3A-203ENST00000397709 ZNF85Q03923 595 aa16.93■□□□□ 0.3
MAP1LC3A-203ENST00000397709 ST3GAL4Q11206 333 aa16.93■□□□□ 0.3
MAP1LC3A-203ENST00000397709 RAB39AQ14964 217 aa16.93■□□□□ 0.3
MAP1LC3A-203ENST00000397709 TMEM154Q6P9G4 183 aa16.93■□□□□ 0.3
MAP1LC3A-203ENST00000397709 SSX6Q7RTT6 188 aa16.93■□□□□ 0.3
MAP1LC3A-203ENST00000397709 WFDC8Q8IUA0 241 aa16.93■□□□□ 0.3
MAP1LC3A-203ENST00000397709 DMRTC2Q8IXT2 367 aaPredicted RBP16.93■□□□□ 0.3
MAP1LC3A-203ENST00000397709 ACBD7Q8N6N7 88 aa16.93■□□□□ 0.3
MAP1LC3A-203ENST00000397709 CPEB3Q8NE35 698 aaKnown RBP16.93■□□□□ 0.3
MAP1LC3A-203ENST00000397709 THEM6Q8WUY1 208 aa16.93■□□□□ 0.3
MAP1LC3A-203ENST00000397709 ASB17Q8WXJ9 295 aa16.93■□□□□ 0.3
MAP1LC3A-203ENST00000397709 SGCDQ92629 289 aa16.93■□□□□ 0.3
MAP1LC3A-203ENST00000397709 SLAMF6Q96DU3 332 aa16.93■□□□□ 0.3
MAP1LC3A-203ENST00000397709 ZC3HAV1LQ96H79 300 aaKnown RBP16.93■□□□□ 0.3
MAP1LC3A-203ENST00000397709 DACH2Q96NX9 599 aa16.93■□□□□ 0.3
MAP1LC3A-203ENST00000397709 COQ7Q99807 217 aa16.93■□□□□ 0.3
MAP1LC3A-203ENST00000397709 ZNF649Q9BS31 505 aa16.93■□□□□ 0.3
MAP1LC3A-203ENST00000397709 COPS4Q9BT78 406 aa16.93■□□□□ 0.3
MAP1LC3A-203ENST00000397709 HDHD2Q9H0R4 259 aa16.93■□□□□ 0.3
MAP1LC3A-203ENST00000397709 DDX28Q9NUL7 540 aaKnown RBP16.93■□□□□ 0.3
MAP1LC3A-203ENST00000397709 HELZ2Q9BYK8 2649 aaKnown RBP16.92■□□□□ 0.3
MAP1LC3A-203ENST00000397709 PTGES3LE9PB15 166 aa16.92■□□□□ 0.3
MAP1LC3A-203ENST00000397709 SERPINA5P05154 406 aa16.92■□□□□ 0.3
MAP1LC3A-203ENST00000397709 CDK1P06493 297 aa16.92■□□□□ 0.3
MAP1LC3A-203ENST00000397709 CELA3BP08861 270 aa16.92■□□□□ 0.3
MAP1LC3A-203ENST00000397709 COX5BP10606 129 aa16.92■□□□□ 0.3
MAP1LC3A-203ENST00000397709 IDH3GP51553 393 aaPredicted RBP16.92■□□□□ 0.3
MAP1LC3A-203ENST00000397709 GABARAPL2P60520 117 aa16.92■□□□□ 0.3
MAP1LC3A-203ENST00000397709 MVKQ03426 396 aa16.92■□□□□ 0.3
MAP1LC3A-203ENST00000397709 PLP2Q04941 152 aa16.92■□□□□ 0.3
MAP1LC3A-203ENST00000397709 ZNF322Q6U7Q0 402 aaPredicted RBP16.92■□□□□ 0.3
MAP1LC3A-203ENST00000397709 MYPOPQ86VE0 399 aaPredicted RBP16.92■□□□□ 0.3
MAP1LC3A-203ENST00000397709 ALDH16A1Q8IZ83 802 aa16.92■□□□□ 0.3
MAP1LC3A-203ENST00000397709 OR1F12Q8NHA8 337 aa16.92■□□□□ 0.3
MAP1LC3A-203ENST00000397709 MYDGFQ969H8 173 aa16.92■□□□□ 0.3
MAP1LC3A-203ENST00000397709 SIGLEC11Q96RL6 698 aa16.92■□□□□ 0.3
MAP1LC3A-203ENST00000397709 C1QTNF6Q9BXI9 259 aa16.92■□□□□ 0.3
MAP1LC3A-203ENST00000397709 ATPIF1Q9UII2 106 aa16.92■□□□□ 0.3
MAP1LC3A-203ENST00000397709 IGHV1-18A0A0C4DH31 117 aa16.91■□□□□ 0.3
MAP1LC3A-203ENST00000397709 IQCMA0A1B0GVH7 501 aa16.91■□□□□ 0.3
MAP1LC3A-203ENST00000397709 DAPL1A0PJW8 107 aa16.91■□□□□ 0.3
MAP1LC3A-203ENST00000397709 ZNF878C9JN71 531 aa16.91■□□□□ 0.3
MAP1LC3A-203ENST00000397709 PRSS44E7EML9 344 aa16.91■□□□□ 0.3
MAP1LC3A-203ENST00000397709 CLDN1O95832 211 aa16.91■□□□□ 0.3
MAP1LC3A-203ENST00000397709 OPRL1P41146 370 aa16.91■□□□□ 0.3
MAP1LC3A-203ENST00000397709 ZNF83P51522 516 aa16.91■□□□□ 0.3
MAP1LC3A-203ENST00000397709 ROM1Q03395 351 aa16.91■□□□□ 0.3
MAP1LC3A-203ENST00000397709 EGR3Q06889 387 aa16.91■□□□□ 0.3
MAP1LC3A-203ENST00000397709 ECH1Q13011 328 aa16.91■□□□□ 0.3
MAP1LC3A-203ENST00000397709 KRTAP27-1Q3LI81 207 aa16.91■□□□□ 0.3
MAP1LC3A-203ENST00000397709 ALKBH2Q6NS38 261 aa16.91■□□□□ 0.3
MAP1LC3A-203ENST00000397709 RHOUQ7L0Q8 258 aa16.91■□□□□ 0.3
MAP1LC3A-203ENST00000397709 STX19Q8N4C7 294 aa16.91■□□□□ 0.3
MAP1LC3A-203ENST00000397709 MS4A3Q96HJ5 214 aa16.91■□□□□ 0.3
MAP1LC3A-203ENST00000397709 OR8B4Q96RC9 309 aa16.91■□□□□ 0.3
MAP1LC3A-203ENST00000397709 ATF6BQ99941 703 aa16.91■□□□□ 0.3
MAP1LC3A-203ENST00000397709 TTTY10Q9BZA0 68 aa16.91■□□□□ 0.3
MAP1LC3A-203ENST00000397709 ERVK13-1Q9NX77 482 aa16.91■□□□□ 0.3
MAP1LC3A-203ENST00000397709 EXOSC1Q9Y3B2 195 aaKnown RBP16.91■□□□□ 0.3
MAP1LC3A-203ENST00000397709 LRRK2Q5S007 2527 aa16.91■□□□□ 0.3
MAP1LC3A-203ENST00000397709 ANKHD1Q8IWZ3 2542 aaKnown RBP16.9■□□□□ 0.3
MAP1LC3A-203ENST00000397709 PTHP01270 115 aa16.9■□□□□ 0.3
MAP1LC3A-203ENST00000397709 CECR9P0C854 216 aa16.9■□□□□ 0.3
MAP1LC3A-203ENST00000397709 LIMS3P0CW19 117 aa16.9■□□□□ 0.3
MAP1LC3A-203ENST00000397709 LIMS4P0CW20 117 aa16.9■□□□□ 0.3
MAP1LC3A-203ENST00000397709 EPXP11678 715 aa16.9■□□□□ 0.3
MAP1LC3A-203ENST00000397709 CRYGSP22914 178 aa16.9■□□□□ 0.3
MAP1LC3A-203ENST00000397709 APEX1P27695 318 aaKnown RBP16.9■□□□□ 0.3
MAP1LC3A-203ENST00000397709 C21orf33P30042 268 aaPredicted RBP16.9■□□□□ 0.3
MAP1LC3A-203ENST00000397709 KIR2DL3P43628 341 aa16.9■□□□□ 0.3
MAP1LC3A-203ENST00000397709 HTR5AP47898 357 aa16.9■□□□□ 0.3
MAP1LC3A-203ENST00000397709 CHN2P52757 468 aa16.9■□□□□ 0.3
MAP1LC3A-203ENST00000397709 GALEQ14376 348 aa16.9■□□□□ 0.3
MAP1LC3A-203ENST00000397709 ZNF684Q5T5D7 378 aa16.9■□□□□ 0.3
MAP1LC3A-203ENST00000397709 RNLSQ5VYX0 342 aa16.9■□□□□ 0.3
MAP1LC3A-203ENST00000397709 KCTD18Q6PI47 426 aaPredicted RBP16.9■□□□□ 0.3
MAP1LC3A-203ENST00000397709 SPATC1Q76KD6 591 aa16.9■□□□□ 0.3
MAP1LC3A-203ENST00000397709 LHFPL3Q86UP9 236 aa16.9■□□□□ 0.3
MAP1LC3A-203ENST00000397709 CENPMQ9NSP4 180 aa16.9■□□□□ 0.3
MAP1LC3A-203ENST00000397709 SLCO1C1Q9NYB5 712 aa16.9■□□□□ 0.3
MAP1LC3A-203ENST00000397709 CRIM1Q9NZV1 1036 aa16.9■□□□□ 0.3
MAP1LC3A-203ENST00000397709 ERVK-18Q9QC07 812 aa16.9■□□□□ 0.3
MAP1LC3A-203ENST00000397709 LOC100509620A0A075B734 347 aa16.89■□□□□ 0.29
MAP1LC3A-203ENST00000397709 TRIM64A6NGJ6 449 aa16.89■□□□□ 0.29
MAP1LC3A-203ENST00000397709 M0R1B8 84 aa16.89■□□□□ 0.29
MAP1LC3A-203ENST00000397709 RGS10O43665 173 aa16.89■□□□□ 0.29
MAP1LC3A-203ENST00000397709 STOMP27105 288 aa16.89■□□□□ 0.29
MAP1LC3A-203ENST00000397709 APLNRP35414 380 aa16.89■□□□□ 0.29
MAP1LC3A-203ENST00000397709 ETV1P50549 477 aa16.89■□□□□ 0.29
MAP1LC3A-203ENST00000397709 RSPO1Q2MKA7 263 aaPredicted RBP16.89■□□□□ 0.29
MAP1LC3A-203ENST00000397709 KCTD21Q4G0X4 260 aa16.89■□□□□ 0.29
MAP1LC3A-203ENST00000397709 CDONQ4KMG0 1287 aa16.89■□□□□ 0.29
MAP1LC3A-203ENST00000397709 DEGS2Q6QHC5 323 aa16.89■□□□□ 0.29
MAP1LC3A-203ENST00000397709 LRRN1Q6UXK5 716 aa16.89■□□□□ 0.29
MAP1LC3A-203ENST00000397709 ZNF679Q8IYX0 411 aa16.89■□□□□ 0.29
MAP1LC3A-203ENST00000397709 SLC30A7Q8NEW0 376 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms