RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 ZNF671Q8TAW3 534 aa5.24□□□□□ -1.57
PTPRD-206ENST00000397617 ADGRG7Q96K78 797 aa5.24□□□□□ -1.57
PTPRD-206ENST00000397617 GPN1Q9HCN4 374 aaPredicted RBP5.24□□□□□ -1.57
PTPRD-206ENST00000397617 B3GAT1Q9P2W7 334 aa5.24□□□□□ -1.57
PTPRD-206ENST00000397617 EXTL2Q9UBQ6 330 aa5.24□□□□□ -1.57
PTPRD-206ENST00000397617 CACFD1Q9UGQ2 172 aa5.24□□□□□ -1.57
PTPRD-206ENST00000397617 CPED1A4D0V7 1026 aa5.24□□□□□ -1.57
PTPRD-206ENST00000397617 GGT3PA6NGU5 568 aa5.24□□□□□ -1.57
PTPRD-206ENST00000397617 ANXA3P12429 323 aa5.24□□□□□ -1.57
PTPRD-206ENST00000397617 RFX2P48378 723 aa5.24□□□□□ -1.57
PTPRD-206ENST00000397617 PLA1AQ53H76 456 aa5.24□□□□□ -1.57
PTPRD-206ENST00000397617 OR2A2Q6IF42 318 aa5.24□□□□□ -1.57
PTPRD-206ENST00000397617 IGFL2Q6UWQ7 119 aa5.24□□□□□ -1.57
PTPRD-206ENST00000397617 CATSPERDQ86XM0 798 aa5.24□□□□□ -1.57
PTPRD-206ENST00000397617 DTX1Q86Y01 620 aa5.24□□□□□ -1.57
PTPRD-206ENST00000397617 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.24□□□□□ -1.57
PTPRD-206ENST00000397617 SPTSSAQ969W0 71 aa5.24□□□□□ -1.57
PTPRD-206ENST00000397617 NECAB3Q96P71 396 aaPredicted RBP5.24□□□□□ -1.57
PTPRD-206ENST00000397617 KLHL25Q9H0H3 589 aa5.24□□□□□ -1.57
PTPRD-206ENST00000397617 DNTTIP1Q9H147 329 aa5.24□□□□□ -1.57
PTPRD-206ENST00000397617 GHITMQ9H3K2 345 aa5.24□□□□□ -1.57
PTPRD-206ENST00000397617 POLE4Q9NR33 117 aa5.24□□□□□ -1.57
PTPRD-206ENST00000397617 TRAV27A0A087WT01 109 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 TMEM72A0PK05 275 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 OR2M5A3KFT3 312 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 OR14I1A6ND48 311 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 BLOC1S5-TXNDC5H3BN57 136 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 B3GALNT1O75752 331 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 HPNP05981 417 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 ZNF28P17035 718 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 DGAT2L6Q6ZPD8 337 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 COLCA1Q6ZS62 124 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 C10orf53Q8N6V4 93 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 KTI12Q96EK9 354 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-206ENST00000397617 PRDM14Q9GZV8 571 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 METTL17Q9H7H0 456 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-206ENST00000397617 SLC22A13Q9Y226 551 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 DOCK11Q5JSL3 2073 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 FAM183AA6NL82 134 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 TAS2R19P59542 299 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 GMFBP60983 142 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 RRAS2P62070 204 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-206ENST00000397617 CCL7P80098 99 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 RBMS2Q15434 407 aaKnown RBP5.23□□□□□ -1.57
PTPRD-206ENST00000397617 MEP1BQ16820 701 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 BTBD16Q32M84 506 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 FAM209AQ5JX71 171 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 VAX1Q5SQQ9 334 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 GABRG1Q8N1C3 465 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 NOXO1Q8NFA2 376 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 STEAP2Q8NFT2 490 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 SORCS2Q96PQ0 1159 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 STEAP1Q9UHE8 339 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 SLCO1B1Q9Y6L6 691 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 XRCC2O43543 280 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 CD74P04233 296 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 ATF1P18846 271 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 THBS4P35443 961 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 PIGFQ07326 219 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 ASCL4Q6XD76 172 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 CADM3Q8N126 398 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 TOMM5Q8N4H5 51 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 FAM89BQ8N5H3 189 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 NLGN4YQ8NFZ3 816 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-206ENST00000397617 ZMYND19Q96E35 227 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-206ENST00000397617 CHST5Q9GZS9 411 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 ANAPC10Q9UM13 185 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 SLC16A7O60669 478 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 GLSO94925 669 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-206ENST00000397617 STAC2Q6ZMT1 411 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 NRARPQ7Z6K4 114 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 TMEM123Q8N131 208 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 OR56B1Q8NGI3 324 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 UCN3Q969E3 161 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 FBXL2Q9UKC9 423 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 LOXL2Q9Y4K0 774 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 CSPG4Q6UVK1 2322 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 TLN2Q9Y4G6 2542 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 TRAV17A0A0B4J275 112 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 TSPAN9O75954 239 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 LPLP06858 475 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 CPT2P23786 658 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 POU3F1Q03052 451 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-206ENST00000397617 C3orf36Q3SXR2 165 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 PLEKHN1Q494U1 663 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-206ENST00000397617 IGFL3Q6UXB1 125 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 YIPF7Q8N8F6 280 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 CYB561A3Q8NBI2 242 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 GPX8Q8TED1 209 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 CGGBP1Q9UFW8 167 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-206ENST00000397617 ZNF346Q9UL40 294 aaKnown RBP5.23□□□□□ -1.57
PTPRD-206ENST00000397617 TRBV11-1A0A0K0K1C0 115 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 MEIOCA2RUB1 952 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 EIF4E1BA6NMX2 242 aaKnown RBP5.23□□□□□ -1.57
PTPRD-206ENST00000397617 SOX1O00570 391 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-206ENST00000397617 RBBP9O75884 186 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 NAT1P18440 290 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 AVPR2P30518 371 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 AGTR1P30556 359 aa5.23□□□□□ -1.57
PTPRD-206ENST00000397617 CSNK1A1P48729 337 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms