RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 NPR2P20594 1047 aa11.61□□□□□ -0.55
SEC13-209ENST00000397117 RPS27P42677 84 aaKnown RBP11.61□□□□□ -0.55
SEC13-209ENST00000397117 CAPZA2P47755 286 aa11.61□□□□□ -0.55
SEC13-209ENST00000397117 EIF2B1Q14232 305 aaKnown RBP11.61□□□□□ -0.55
SEC13-209ENST00000397117 DAZAP2Q15038 168 aaPredicted RBP11.61□□□□□ -0.55
SEC13-209ENST00000397117 CEACAM16Q2WEN9 425 aa11.61□□□□□ -0.55
SEC13-209ENST00000397117 ARMCX4Q5H9R4 360 aa11.61□□□□□ -0.55
SEC13-209ENST00000397117 TEX30Q5JUR7 227 aa11.61□□□□□ -0.55
SEC13-209ENST00000397117 FAM220AQ7Z4H9 259 aa11.61□□□□□ -0.55
SEC13-209ENST00000397117 RFLNBQ8N5W9 214 aa11.61□□□□□ -0.55
SEC13-209ENST00000397117 OR13F1Q8NGS4 319 aa11.61□□□□□ -0.55
SEC13-209ENST00000397117 OR2AJ1Q8NGZ0 328 aa11.61□□□□□ -0.55
SEC13-209ENST00000397117 MBD3L2Q8NHZ7 208 aaPredicted RBP11.61□□□□□ -0.55
SEC13-209ENST00000397117 SPRYD4Q8WW59 207 aaPredicted RBP11.61□□□□□ -0.55
SEC13-209ENST00000397117 MGLLQ99685 303 aa11.61□□□□□ -0.55
SEC13-209ENST00000397117 ZNF649Q9BS31 505 aa11.61□□□□□ -0.55
SEC13-209ENST00000397117 EMC7Q9NPA0 242 aa11.61□□□□□ -0.55
SEC13-209ENST00000397117 SLC7A10Q9NS82 523 aa11.61□□□□□ -0.55
SEC13-209ENST00000397117 FBN3Q75N90 2809 aa11.61□□□□□ -0.55
SEC13-209ENST00000397117 A6NNC1 897 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 IL2RAP01589 272 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 ALOX5APP20292 161 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 EDNRAP25101 427 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 CD79BP40259 229 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 PEX19P40855 299 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 OR3A2P47893 321 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 GP2P55259 537 aaKnown RBP11.6□□□□□ -0.55
SEC13-209ENST00000397117 SH3BGRP55822 239 aaPredicted RBP11.6□□□□□ -0.55
SEC13-209ENST00000397117 LSM6P62312 80 aaKnown RBP11.6□□□□□ -0.55
SEC13-209ENST00000397117 MRPS34P82930 218 aaKnown RBP11.6□□□□□ -0.55
SEC13-209ENST00000397117 EGR3Q06889 387 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 FAPQ12884 760 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 STK11Q15831 433 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 KCNMB1Q16558 191 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 KCTD18Q6PI47 426 aaPredicted RBP11.6□□□□□ -0.55
SEC13-209ENST00000397117 PLEKHG7Q6ZR37 379 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 SEM1Q6ZVN7 128 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 LINGO2Q7L985 606 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 SSX6Q7RTT6 188 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 LINC00346Q8IVM7 164 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 OR6K3Q8NGY3 331 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 FAM222BQ8WU58 562 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 DGCR14Q96DF8 476 aaKnown RBP11.6□□□□□ -0.55
SEC13-209ENST00000397117 ZNF837Q96EG3 531 aaPredicted RBP11.6□□□□□ -0.55
SEC13-209ENST00000397117 C4orf36Q96KX1 117 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 ZFP3Q96NJ6 502 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 ISG20L2Q9H9L3 353 aaKnown RBP11.6□□□□□ -0.55
SEC13-209ENST00000397117 SIAEQ9HAT2 523 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 GNG8Q9UK08 70 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 IKZF2Q9UKS7 526 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 KLHDC2Q9Y2U9 406 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 JMJD1CQ15652 2540 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 FN1P02751 2386 aaKnown RBP11.6□□□□□ -0.55
SEC13-209ENST00000397117 H3BSA7 217 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 RPL36A-HNRNPH2H7BZ11 118 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 SCG5P05408 212 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 KRT8P05787 483 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 CRHP06850 196 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 TACSTD2P09758 323 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 TMIGD3P0DMS9 266 aaPredicted RBP11.6□□□□□ -0.55
SEC13-209ENST00000397117 TIMP3P35625 211 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 OR12D2P58182 307 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 GUSBP1Q15486 140 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 PCK2Q16822 640 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 CDONQ4KMG0 1287 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 TP53I3Q53FA7 332 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 FBXW9Q5XUX1 488 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 FOXL2NBQ6ZUU3 175 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 DCXRQ7Z4W1 244 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 KCTD20Q7Z5Y7 419 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 BIVMQ86UB2 503 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 KLBQ86Z14 1044 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 SYS1Q8N2H4 156 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 LRRC18Q8N456 261 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 RELL2Q8NC24 303 aaPredicted RBP11.6□□□□□ -0.55
SEC13-209ENST00000397117 HTRA1Q92743 480 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 TSC22D3Q99576 134 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 FOXB1Q99853 325 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 TRIM36Q9NQ86 728 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 TMEM38BQ9NVV0 291 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 BABAM2Q9NXR7 383 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 ASH2LQ9UBL3 628 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 CYB5R1Q9UHQ9 305 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 PRSS50Q9UI38 385 aa11.6□□□□□ -0.55
SEC13-209ENST00000397117 CCDC160A6NGH7 325 aa11.59□□□□□ -0.55
SEC13-209ENST00000397117 METTL15A6NJ78 407 aa11.59□□□□□ -0.55
SEC13-209ENST00000397117 HSPB2A8KAH6 182 aa11.59□□□□□ -0.55
SEC13-209ENST00000397117 PSMD9O00233 223 aa11.59□□□□□ -0.55
SEC13-209ENST00000397117 ATE1O95260 518 aa11.59□□□□□ -0.55
SEC13-209ENST00000397117 FARS2O95363 451 aaKnown RBP11.59□□□□□ -0.55
SEC13-209ENST00000397117 PSKH1P11801 424 aa11.59□□□□□ -0.55
SEC13-209ENST00000397117 KIR2DL2P43627 348 aaPredicted RBP11.59□□□□□ -0.55
SEC13-209ENST00000397117 GBX2P52951 348 aaPredicted RBP11.59□□□□□ -0.55
SEC13-209ENST00000397117 MLLT11Q13015 90 aaPredicted RBP11.59□□□□□ -0.55
SEC13-209ENST00000397117 HSPB2Q16082 182 aa11.59□□□□□ -0.55
SEC13-209ENST00000397117 TSTQ16762 297 aaKnown RBP11.59□□□□□ -0.55
SEC13-209ENST00000397117 FBXL19-AS1Q494R0 122 aa11.59□□□□□ -0.55
SEC13-209ENST00000397117 CORO6Q6QEF8 472 aa11.59□□□□□ -0.55
SEC13-209ENST00000397117 PAMR1Q6UXH9 720 aa11.59□□□□□ -0.55
SEC13-209ENST00000397117 ZNF813Q6ZN06 617 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms