RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 RAB40BQ12829 278 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 SLC36A2Q495M3 483 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 BEX5Q5H9J7 111 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 ELFN2Q5R3F8 820 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 INTS14Q96SY0 518 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 ZNF184Q99676 751 aaPredicted RBP9.13□□□□□ -0.95
NUP98-205ENST00000397007 ABHD6Q9BV23 337 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 PRRG3Q9BZD7 231 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 SRA1Q9HD15 236 aaKnown RBP9.13□□□□□ -0.95
NUP98-205ENST00000397007 G6PC2Q9NQR9 355 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 MRM2Q9UI43 246 aaKnown RBP9.13□□□□□ -0.95
NUP98-205ENST00000397007 ACOD1A6NK06 481 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 PATE4P0C8F1 98 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 NR1H2P55055 460 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 TUBA1BP68363 451 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 TUBA4AP68366 448 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 LRRC36Q1X8D7 754 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 IZUMO2Q6UXV1 221 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 MEX3BQ6ZN04 569 aaKnown RBP9.13□□□□□ -0.95
NUP98-205ENST00000397007 TUBA1AQ71U36 451 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 C1orf174Q8IYL3 243 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 OR52N5Q8NH56 324 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 ITFG2Q969R8 447 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 MARS2Q96GW9 593 aaKnown RBP9.13□□□□□ -0.95
NUP98-205ENST00000397007 OR8B4Q96RC9 309 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 HDHD2Q9H0R4 259 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 ZNF319Q9P2F9 582 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 DIMT1Q9UNQ2 313 aaKnown RBP9.13□□□□□ -0.95
NUP98-205ENST00000397007 E7EQL1 145 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 SERPINI2O75830 405 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 ADH4P08319 380 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 NR4A1P22736 598 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 TUBG1P23258 451 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 PCBD1P61457 104 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 SNTB1Q13884 538 aaKnown RBP9.13□□□□□ -0.95
NUP98-205ENST00000397007 ZNF774Q6NX45 483 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 GALNT4Q8N4A0 578 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 CNIH3Q8TBE1 160 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 GGHQ92820 318 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 MBD6Q96DN6 1003 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 MS4A3Q96HJ5 214 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 RADILQ96JH8 1075 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 TUBG2Q9NRH3 451 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 ASH2LQ9UBL3 628 aa9.13□□□□□ -0.95
NUP98-205ENST00000397007 DIDO1Q9BTC0 2240 aaKnown RBP9.13□□□□□ -0.95
NUP98-205ENST00000397007 ZNF593O00488 134 aaPredicted RBP9.12□□□□□ -0.95
NUP98-205ENST00000397007 ATE1O95260 518 aa9.12□□□□□ -0.95
NUP98-205ENST00000397007 PTBP3O95758 552 aaKnown RBP9.12□□□□□ -0.95
NUP98-205ENST00000397007 PLAUP00749 431 aa9.12□□□□□ -0.95
NUP98-205ENST00000397007 OR2T7P0C7T2 308 aa9.12□□□□□ -0.95
NUP98-205ENST00000397007 ZNF101Q8IZC7 436 aa9.12□□□□□ -0.95
NUP98-205ENST00000397007 UBE2J2Q8N2K1 259 aa9.12□□□□□ -0.95
NUP98-205ENST00000397007 GJC3Q8NFK1 279 aa9.12□□□□□ -0.95
NUP98-205ENST00000397007 OR2T27Q8NH04 317 aa9.12□□□□□ -0.95
NUP98-205ENST00000397007 OR1F12Q8NHA8 337 aa9.12□□□□□ -0.95
NUP98-205ENST00000397007 IL4I1Q96RQ9 567 aa9.12□□□□□ -0.95
NUP98-205ENST00000397007 CDCA4Q9BXL8 241 aa9.12□□□□□ -0.95
NUP98-205ENST00000397007 INPP5EQ9NRR6 644 aa9.12□□□□□ -0.95
NUP98-205ENST00000397007 PCDHGB1Q9Y5G3 927 aa9.12□□□□□ -0.95
NUP98-205ENST00000397007 ARFGEF3Q5TH69 2177 aa9.12□□□□□ -0.95
NUP98-205ENST00000397007 CD1AP06126 327 aa9.12□□□□□ -0.95
NUP98-205ENST00000397007 CCDC159P0C7I6 412 aa9.12□□□□□ -0.95
NUP98-205ENST00000397007 IL32P24001 234 aa9.12□□□□□ -0.95
NUP98-205ENST00000397007 CRHBPP24387 322 aa9.12□□□□□ -0.95
NUP98-205ENST00000397007 C9orf135Q5VTT2 229 aa9.12□□□□□ -0.95
NUP98-205ENST00000397007 OTPQ5XKR4 325 aa9.12□□□□□ -0.95
NUP98-205ENST00000397007 CRIP3Q6Q6R5 217 aa9.12□□□□□ -0.95
NUP98-205ENST00000397007 ZMYND19Q96E35 227 aaPredicted RBP9.12□□□□□ -0.95
NUP98-205ENST00000397007 CXXC4Q9H2H0 198 aa9.12□□□□□ -0.95
NUP98-205ENST00000397007 TBCCD1Q9NVR7 557 aa9.12□□□□□ -0.95
NUP98-205ENST00000397007 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.12□□□□□ -0.95
NUP98-205ENST00000397007 FAM171A2A8MVW0 826 aa9.12□□□□□ -0.95
NUP98-205ENST00000397007 MTNR1AP48039 350 aa9.12□□□□□ -0.95
NUP98-205ENST00000397007 KRTAP10-9P60411 292 aa9.12□□□□□ -0.95
NUP98-205ENST00000397007 FBXW12Q6X9E4 464 aa9.12□□□□□ -0.95
NUP98-205ENST00000397007 SLC16A14Q7RTX9 510 aa9.12□□□□□ -0.95
NUP98-205ENST00000397007 LRRC46Q96FV0 321 aa9.12□□□□□ -0.95
NUP98-205ENST00000397007 FOXN4Q96NZ1 517 aa9.12□□□□□ -0.95
NUP98-205ENST00000397007 DNAJC27Q9NZQ0 273 aa9.12□□□□□ -0.95
NUP98-205ENST00000397007 A0A1W2PQL4 384 aaPredicted RBP9.11□□□□□ -0.95
NUP98-205ENST00000397007 A0A1W2PR80 420 aa9.11□□□□□ -0.95
NUP98-205ENST00000397007 SULT1C4O75897 302 aa9.11□□□□□ -0.95
NUP98-205ENST00000397007 CD37P11049 281 aa9.11□□□□□ -0.95
NUP98-205ENST00000397007 KITLGP21583 273 aa9.11□□□□□ -0.95
NUP98-205ENST00000397007 PCMT1P22061 227 aa9.11□□□□□ -0.95
NUP98-205ENST00000397007 PAICSP22234 425 aaKnown RBP9.11□□□□□ -0.95
NUP98-205ENST00000397007 STOMP27105 288 aa9.11□□□□□ -0.95
NUP98-205ENST00000397007 POU1F1P28069 291 aa9.11□□□□□ -0.95
NUP98-205ENST00000397007 FMO3P31513 532 aa9.11□□□□□ -0.95
NUP98-205ENST00000397007 MMP16P51512 607 aa9.11□□□□□ -0.95
NUP98-205ENST00000397007 SCRN3Q0VDG4 424 aa9.11□□□□□ -0.95
NUP98-205ENST00000397007 RAB39AQ14964 217 aa9.11□□□□□ -0.95
NUP98-205ENST00000397007 C6orf141Q5SZD1 244 aa9.11□□□□□ -0.95
NUP98-205ENST00000397007 LCN1P1Q5VSP4 162 aa9.11□□□□□ -0.95
NUP98-205ENST00000397007 SHFQ7M4L6 423 aa9.11□□□□□ -0.95
NUP98-205ENST00000397007 THAP5Q7Z6K1 395 aa9.11□□□□□ -0.95
NUP98-205ENST00000397007 PROKR2Q8NFJ6 384 aa9.11□□□□□ -0.95
NUP98-205ENST00000397007 OR51L1Q8NGJ5 315 aa9.11□□□□□ -0.95
NUP98-205ENST00000397007 PLPPR2Q96GM1 343 aa9.11□□□□□ -0.95
NUP98-205ENST00000397007 LYZL4Q96KX0 146 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms