RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 OR4A4PQ8NGN8 299 aa12.46□□□□□ -0.41
NUP98-204ENST00000397004 ADIPOR1Q96A54 375 aa12.46□□□□□ -0.41
NUP98-204ENST00000397004 ZBTB8AQ96BR9 441 aa12.46□□□□□ -0.41
NUP98-204ENST00000397004 SLC25A21Q9BQT8 299 aaPredicted RBP12.46□□□□□ -0.41
NUP98-204ENST00000397004 RNF126Q9BV68 326 aa12.46□□□□□ -0.41
NUP98-204ENST00000397004 NUDT9Q9BW91 350 aa12.46□□□□□ -0.41
NUP98-204ENST00000397004 DHDHQ9UQ10 334 aa12.46□□□□□ -0.41
NUP98-204ENST00000397004 C9orf170A2RU37 121 aa12.46□□□□□ -0.41
NUP98-204ENST00000397004 OR2T1O43869 369 aa12.46□□□□□ -0.41
NUP98-204ENST00000397004 SNAPC5O75971 98 aa12.46□□□□□ -0.41
NUP98-204ENST00000397004 RENP00797 406 aa12.46□□□□□ -0.41
NUP98-204ENST00000397004 RAB3AP20336 220 aa12.46□□□□□ -0.41
NUP98-204ENST00000397004 ACTBP60709 375 aa12.46□□□□□ -0.41
NUP98-204ENST00000397004 ACTG1P63261 375 aa12.46□□□□□ -0.41
NUP98-204ENST00000397004 QRFPP83859 136 aa12.46□□□□□ -0.41
NUP98-204ENST00000397004 PLEKHN1Q494U1 663 aaPredicted RBP12.46□□□□□ -0.41
NUP98-204ENST00000397004 OR5AP2Q8NGF4 316 aa12.46□□□□□ -0.41
NUP98-204ENST00000397004 MMABQ96EY8 250 aaPredicted RBP12.46□□□□□ -0.41
NUP98-204ENST00000397004 PTGES2Q9H7Z7 377 aa12.46□□□□□ -0.41
NUP98-204ENST00000397004 CNTD2Q9H8S5 307 aa12.46□□□□□ -0.41
NUP98-204ENST00000397004 MBD2Q9UBB5 411 aa12.46□□□□□ -0.41
NUP98-204ENST00000397004 NOP16Q9Y3C1 178 aaKnown RBP12.46□□□□□ -0.41
NUP98-204ENST00000397004 A0A0D9SG52 128 aa12.46□□□□□ -0.42
NUP98-204ENST00000397004 EPOPA6NHQ4 379 aa12.46□□□□□ -0.42
NUP98-204ENST00000397004 TTLL8A6PVC2 850 aa12.46□□□□□ -0.42
NUP98-204ENST00000397004 CD96P40200 585 aa12.46□□□□□ -0.42
NUP98-204ENST00000397004 ADAM8P78325 824 aa12.46□□□□□ -0.42
NUP98-204ENST00000397004 HHEXQ03014 270 aa12.46□□□□□ -0.42
NUP98-204ENST00000397004 SNTB1Q13884 538 aaKnown RBP12.46□□□□□ -0.42
NUP98-204ENST00000397004 SHHQ15465 462 aa12.46□□□□□ -0.42
NUP98-204ENST00000397004 INPP5JQ15735 1006 aaPredicted RBP12.46□□□□□ -0.42
NUP98-204ENST00000397004 PAN3Q58A45 887 aaKnown RBP12.46□□□□□ -0.42
NUP98-204ENST00000397004 CLVS2Q5SYC1 327 aa12.46□□□□□ -0.42
NUP98-204ENST00000397004 PAPD4Q6PIY7 484 aaKnown RBP12.46□□□□□ -0.42
NUP98-204ENST00000397004 FJX1Q86VR8 437 aa12.46□□□□□ -0.42
NUP98-204ENST00000397004 LINC00346Q8IVM7 164 aa12.46□□□□□ -0.42
NUP98-204ENST00000397004 ZNF563Q8TA94 476 aa12.46□□□□□ -0.42
NUP98-204ENST00000397004 FAM46BQ96A09 425 aa12.46□□□□□ -0.42
NUP98-204ENST00000397004 DUSP15Q9H1R2 295 aaPredicted RBP12.46□□□□□ -0.42
NUP98-204ENST00000397004 CYTL1Q9NRR1 136 aa12.46□□□□□ -0.42
NUP98-204ENST00000397004 LANCL2Q9NS86 450 aa12.46□□□□□ -0.42
NUP98-204ENST00000397004 GPN3Q9UHW5 284 aaPredicted RBP12.46□□□□□ -0.42
NUP98-204ENST00000397004 LOC390937A0A1W2PQ73 354 aa12.45□□□□□ -0.42
NUP98-204ENST00000397004 LINC01387J3KSC0 135 aa12.45□□□□□ -0.42
NUP98-204ENST00000397004 SSX5O60225 188 aa12.45□□□□□ -0.42
NUP98-204ENST00000397004 NPIPB7O75200 414 aa12.45□□□□□ -0.42
NUP98-204ENST00000397004 IL2RAP01589 272 aa12.45□□□□□ -0.42
NUP98-204ENST00000397004 DLSTP36957 453 aa12.45□□□□□ -0.42
NUP98-204ENST00000397004 NARS2Q96I59 477 aaKnown RBP12.45□□□□□ -0.42
NUP98-204ENST00000397004 MESP1Q9BRJ9 268 aa12.45□□□□□ -0.42
NUP98-204ENST00000397004 FOXQ1Q9C009 403 aa12.45□□□□□ -0.42
NUP98-204ENST00000397004 TLNRD1Q9H1K6 362 aa12.45□□□□□ -0.42
NUP98-204ENST00000397004 MTIF3Q9H2K0 278 aaKnown RBP12.45□□□□□ -0.42
NUP98-204ENST00000397004 GDF2Q9UK05 429 aaPredicted RBP12.45□□□□□ -0.42
NUP98-204ENST00000397004 COA3Q9Y2R0 106 aaPredicted RBP12.45□□□□□ -0.42
NUP98-204ENST00000397004 TMEM218A2RU14 115 aa12.45□□□□□ -0.42
NUP98-204ENST00000397004 C10orf142B7Z368 130 aa12.45□□□□□ -0.42
NUP98-204ENST00000397004 EFSO43281 561 aa12.45□□□□□ -0.42
NUP98-204ENST00000397004 SIGLEC6O43699 453 aa12.45□□□□□ -0.42
NUP98-204ENST00000397004 IGHV4-34P06331 123 aa12.45□□□□□ -0.42
NUP98-204ENST00000397004 CXADRP78310 365 aa12.45□□□□□ -0.42
NUP98-204ENST00000397004 SSBP1Q04837 148 aaKnown RBP12.45□□□□□ -0.42
NUP98-204ENST00000397004 ELOCQ15369 112 aa12.45□□□□□ -0.42
NUP98-204ENST00000397004 SOX7Q9BT81 388 aa12.45□□□□□ -0.42
NUP98-204ENST00000397004 POTEKPQ9BYX7 375 aa12.45□□□□□ -0.42
NUP98-204ENST00000397004 SELENOIQ9C0D9 397 aa12.45□□□□□ -0.42
NUP98-204ENST00000397004 ACKR4Q9NPB9 350 aa12.45□□□□□ -0.42
NUP98-204ENST00000397004 TMEM14AQ9Y6G1 99 aa12.45□□□□□ -0.42
NUP98-204ENST00000397004 ARID1AO14497 2285 aa12.45□□□□□ -0.42
NUP98-204ENST00000397004 MSGN1A6NI15 193 aa12.45□□□□□ -0.42
NUP98-204ENST00000397004 HLA-GP17693 338 aa12.45□□□□□ -0.42
NUP98-204ENST00000397004 EIF2B1Q14232 305 aaKnown RBP12.45□□□□□ -0.42
NUP98-204ENST00000397004 STK11Q15831 433 aa12.45□□□□□ -0.42
NUP98-204ENST00000397004 VWA2Q5GFL6 755 aa12.45□□□□□ -0.42
NUP98-204ENST00000397004 GPR119Q8TDV5 335 aa12.45□□□□□ -0.42
NUP98-204ENST00000397004 MITD1Q8WV92 249 aa12.45□□□□□ -0.42
NUP98-204ENST00000397004 TMEM231Q9H6L2 316 aa12.45□□□□□ -0.42
NUP98-204ENST00000397004 GAREM1Q9H706 876 aa12.45□□□□□ -0.42
NUP98-204ENST00000397004 HCRTR2O43614 444 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 OR2F2O95006 317 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 CYB5AP00167 134 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 DCNP07585 359 aaKnown RBP12.44□□□□□ -0.42
NUP98-204ENST00000397004 FSTP19883 344 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 FGL1Q08830 312 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 RIPPLY1Q0D2K3 151 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 OR2F1Q13607 317 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 MST1LQ2TV78 715 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 LYG2Q86SG7 212 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 JAGN1Q8N5M9 183 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 OR52N4Q8NGI2 321 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 ST7LQ8TDW4 575 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 EDAQ92838 391 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 VSX1Q9NZR4 365 aaPredicted RBP12.44□□□□□ -0.42
NUP98-204ENST00000397004 CDV3Q9UKY7 258 aaKnown RBP12.44□□□□□ -0.42
NUP98-204ENST00000397004 KCNK7Q9Y2U2 307 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 PRELID3BQ9Y3B1 194 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 LOC107986453A0A1B0GWG9 222 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 DBX1A6NMT0 343 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 SULT1C2O00338 296 aa12.44□□□□□ -0.42
NUP98-204ENST00000397004 SCDO00767 359 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms