RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 PIGQQ9BRB3 760 aa9.5□□□□□ -0.89
COL4A4-201ENST00000396625 GMPR2Q9P2T1 348 aaKnown RBP9.5□□□□□ -0.89
COL4A4-201ENST00000396625 GCSHP23434 173 aa9.5□□□□□ -0.89
COL4A4-201ENST00000396625 S100A4P26447 101 aaKnown RBP9.5□□□□□ -0.89
COL4A4-201ENST00000396625 ASAH1Q13510 395 aa9.5□□□□□ -0.89
COL4A4-201ENST00000396625 LRFN3Q9BTN0 628 aa9.5□□□□□ -0.89
COL4A4-201ENST00000396625 LRRC37A3O60309 1634 aa9.5□□□□□ -0.89
COL4A4-201ENST00000396625 MAN2B1O00754 1011 aa9.5□□□□□ -0.89
COL4A4-201ENST00000396625 COX5AP20674 150 aa9.5□□□□□ -0.89
COL4A4-201ENST00000396625 RACK1P63244 317 aaKnown RBP9.5□□□□□ -0.89
COL4A4-201ENST00000396625 TSPAN31Q12999 210 aa9.5□□□□□ -0.89
COL4A4-201ENST00000396625 OR8G1Q15617 311 aa9.5□□□□□ -0.89
COL4A4-201ENST00000396625 OR2AK2Q8NG84 335 aa9.5□□□□□ -0.89
COL4A4-201ENST00000396625 P2RY2P41231 377 aa9.5□□□□□ -0.89
COL4A4-201ENST00000396625 GNG4P50150 75 aa9.5□□□□□ -0.89
COL4A4-201ENST00000396625 SSR4P51571 173 aa9.5□□□□□ -0.89
COL4A4-201ENST00000396625 CSNK1G2P78368 415 aa9.5□□□□□ -0.89
COL4A4-201ENST00000396625 SLC10A2Q12908 348 aaPredicted RBP9.5□□□□□ -0.89
COL4A4-201ENST00000396625 GGNBP1Q5YKI7 109 aa9.5□□□□□ -0.89
COL4A4-201ENST00000396625 CPEB3Q8NE35 698 aaKnown RBP9.5□□□□□ -0.89
COL4A4-201ENST00000396625 LRIT1Q9P2V4 623 aa9.5□□□□□ -0.89
COL4A4-201ENST00000396625 TRDV1A0A1B0GX56 115 aa9.5□□□□□ -0.89
COL4A4-201ENST00000396625 A6NDN8 102 aa9.5□□□□□ -0.89
COL4A4-201ENST00000396625 ZFAND5O76080 213 aa9.5□□□□□ -0.89
COL4A4-201ENST00000396625 FGF4P08620 206 aa9.5□□□□□ -0.89
COL4A4-201ENST00000396625 OR6M1Q8NGM8 313 aa9.5□□□□□ -0.89
COL4A4-201ENST00000396625 LAMP3Q9UQV4 416 aa9.5□□□□□ -0.89
COL4A4-201ENST00000396625 M0R143 59 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 OR5AL1P0C617 328 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 CR2P20023 1033 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 HIST1H1TP22492 207 aaPredicted RBP9.49□□□□□ -0.89
COL4A4-201ENST00000396625 RPEL1Q2QD12 228 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 SPRYD7Q5W111 196 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 BHLHE23Q8NDY6 225 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 SLC35A4Q96G79 324 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 CALHM2Q9HA72 323 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 GDF2Q9UK05 429 aaPredicted RBP9.49□□□□□ -0.89
COL4A4-201ENST00000396625 SYT6Q5T7P8 510 aaPredicted RBP9.49□□□□□ -0.89
COL4A4-201ENST00000396625 LYSMD4Q5XG99 296 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 C5orf46Q6UWT4 87 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 Q6ZSR6 202 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 GPR45Q9Y5Y3 372 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 PLSCR1O15162 318 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 SELENOFO60613 162 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 ZNF217O75362 1048 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 PIAS2O75928 621 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 BMI1P35226 326 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 B2MP61769 119 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 OR1J1Q8NGS3 322 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 OR13F1Q8NGS4 319 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 OLIG1Q8TAK6 271 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 HHIPQ96QV1 700 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 AKIRIN1Q9H9L7 192 aaPredicted RBP9.49□□□□□ -0.89
COL4A4-201ENST00000396625 GPR37O15354 613 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 DEDDO75618 318 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 GLAP06280 429 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 PSMB6P28072 239 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 CCR9P51686 369 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 CLEC12BQ2HXU8 276 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 TUSC5Q8IXB3 177 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 APCDD1Q8J025 514 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 PIGTQ969N2 578 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 DLL4Q9NR61 685 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 ELAVL4P26378 380 aaKnown RBP9.49□□□□□ -0.89
COL4A4-201ENST00000396625 GCAP28676 217 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 MAP2K6P52564 334 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 DCAF7P61962 342 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 NPY5RQ15761 445 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 PLXDC2Q6UX71 529 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 DPY19L2P2Q6ZN68 376 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 TCEAL8Q8IYN2 117 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 SLC38A5Q8WUX1 472 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 CXorf58Q96LI9 332 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 CIB3Q96Q77 187 aaPredicted RBP9.49□□□□□ -0.89
COL4A4-201ENST00000396625 A0A0A6YYC8 382 aaPredicted RBP9.49□□□□□ -0.89
COL4A4-201ENST00000396625 I3L1I5 382 aaPredicted RBP9.49□□□□□ -0.89
COL4A4-201ENST00000396625 IAPPP10997 89 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 SLC6A12P48065 614 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 NXNL2Q5VZ03 156 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 EIF4E3Q8N5X7 224 aaKnown RBP9.49□□□□□ -0.89
COL4A4-201ENST00000396625 PSORS1C1Q9UIG5 152 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 A0A1B0GTQ1 180 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 ANKRD61A6NGH8 418 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 RPL12P30050 165 aaKnown RBP9.49□□□□□ -0.89
COL4A4-201ENST00000396625 DSC1Q08554 894 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 ELOBQ15370 118 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 BATF2Q8N1L9 274 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 ZNF775Q96BV0 537 aaPredicted RBP9.49□□□□□ -0.89
COL4A4-201ENST00000396625 LINC00597Q9H2U6 94 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 NAT8BQ9UHF3 227 aa9.49□□□□□ -0.89
COL4A4-201ENST00000396625 MAST2Q6P0Q8 1798 aa9.48□□□□□ -0.89
COL4A4-201ENST00000396625 AIFM1O95831 613 aa9.48□□□□□ -0.89
COL4A4-201ENST00000396625 SLC10A3P09131 477 aa9.48□□□□□ -0.89
COL4A4-201ENST00000396625 SLC25A4P12235 298 aa9.48□□□□□ -0.89
COL4A4-201ENST00000396625 RAD52P43351 418 aa9.48□□□□□ -0.89
COL4A4-201ENST00000396625 DAPP51397 102 aa9.48□□□□□ -0.89
COL4A4-201ENST00000396625 BANF2Q9H503 90 aa9.48□□□□□ -0.89
COL4A4-201ENST00000396625 PHYHIPLQ96FC7 376 aa9.48□□□□□ -0.89
COL4A4-201ENST00000396625 TIMD4Q96H15 378 aa9.48□□□□□ -0.89
COL4A4-201ENST00000396625 SLC22A12Q96S37 553 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms