RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 MYO5AQ9Y4I1 1855 aaKnown RBP12.81□□□□□ -0.36
COL4A3-202ENST00000396578 SH2D1BO14796 132 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 ACSM4P0C7M7 580 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 MLF1P58340 268 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 EMC4Q5J8M3 183 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 OR10P1Q8NGE3 313 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 TMEM40Q8WWA1 233 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 ARHGDIGQ99819 225 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 DOT1LQ8TEK3 1739 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 ARPC3O15145 178 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 FKBP2P26885 142 aaKnown RBP12.81□□□□□ -0.36
COL4A3-202ENST00000396578 BAMBIQ13145 260 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 PGBD5Q8N414 524 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 SLC22A12Q96S37 553 aa12.81□□□□□ -0.36
COL4A3-202ENST00000396578 IGKV6D-21A0A0A0MT36 114 aa12.8□□□□□ -0.36
COL4A3-202ENST00000396578 TEKQ02763 1124 aa12.8□□□□□ -0.36
COL4A3-202ENST00000396578 SLC39A7Q92504 469 aa12.8□□□□□ -0.36
COL4A3-202ENST00000396578 MBOAT4Q96T53 435 aa12.8□□□□□ -0.36
COL4A3-202ENST00000396578 FBXO34Q9NWN3 711 aa12.8□□□□□ -0.36
COL4A3-202ENST00000396578 NTNG1Q9Y2I2 539 aa12.8□□□□□ -0.36
COL4A3-202ENST00000396578 NDUFB7P17568 137 aa12.8□□□□□ -0.36
COL4A3-202ENST00000396578 IQCJQ1A5X6 159 aa12.8□□□□□ -0.36
COL4A3-202ENST00000396578 YOD1Q5VVQ6 348 aaPredicted RBP12.8□□□□□ -0.36
COL4A3-202ENST00000396578 ZNF813Q6ZN06 617 aa12.8□□□□□ -0.36
COL4A3-202ENST00000396578 SLC38A9Q8NBW4 561 aa12.8□□□□□ -0.36
COL4A3-202ENST00000396578 GOT1L1Q8NHS2 421 aaPredicted RBP12.8□□□□□ -0.36
COL4A3-202ENST00000396578 HSFX1Q9UBD0 423 aa12.8□□□□□ -0.36
COL4A3-202ENST00000396578 CHST2Q9Y4C5 530 aa12.8□□□□□ -0.36
COL4A3-202ENST00000396578 RRASP10301 218 aa12.8□□□□□ -0.36
COL4A3-202ENST00000396578 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.8□□□□□ -0.36
COL4A3-202ENST00000396578 SHISA4Q96DD7 197 aa12.8□□□□□ -0.36
COL4A3-202ENST00000396578 DLL4Q9NR61 685 aa12.8□□□□□ -0.36
COL4A3-202ENST00000396578 NDRG3Q9UGV2 375 aa12.8□□□□□ -0.36
COL4A3-202ENST00000396578 SLC25A6P12236 298 aa12.8□□□□□ -0.36
COL4A3-202ENST00000396578 RBP2P50120 134 aa12.8□□□□□ -0.36
COL4A3-202ENST00000396578 PLEKHA2Q9HB19 425 aa12.8□□□□□ -0.36
COL4A3-202ENST00000396578 C5P01031 1676 aa12.8□□□□□ -0.36
COL4A3-202ENST00000396578 MPGP29372 298 aa12.8□□□□□ -0.36
COL4A3-202ENST00000396578 ACKR1Q16570 336 aa12.8□□□□□ -0.36
COL4A3-202ENST00000396578 MOGAT2Q3SYC2 334 aa12.8□□□□□ -0.36
COL4A3-202ENST00000396578 MFSD4AQ8N468 514 aa12.8□□□□□ -0.36
COL4A3-202ENST00000396578 INSM2Q96T92 566 aaPredicted RBP12.8□□□□□ -0.36
COL4A3-202ENST00000396578 TIMP1P01033 207 aa12.8□□□□□ -0.36
COL4A3-202ENST00000396578 SLC35E2P0CK97 266 aa12.8□□□□□ -0.36
COL4A3-202ENST00000396578 ARNTP27540 789 aa12.8□□□□□ -0.36
COL4A3-202ENST00000396578 C1orf140Q5VVS0 124 aa12.8□□□□□ -0.36
COL4A3-202ENST00000396578 MFSD12Q6NUT3 480 aa12.8□□□□□ -0.36
COL4A3-202ENST00000396578 SLCO4C1Q6ZQN7 724 aa12.8□□□□□ -0.36
COL4A3-202ENST00000396578 SLC38A6Q8IZM9 456 aa12.8□□□□□ -0.36
COL4A3-202ENST00000396578 C11orf42Q8N5U0 333 aa12.8□□□□□ -0.36
COL4A3-202ENST00000396578 ARFGAP1Q8N6T3 406 aa12.8□□□□□ -0.36
COL4A3-202ENST00000396578 L3MBTL4Q8NA19 623 aa12.8□□□□□ -0.36
COL4A3-202ENST00000396578 OR2M7Q8NG81 312 aa12.8□□□□□ -0.36
COL4A3-202ENST00000396578 CHST11Q9NPF2 352 aa12.8□□□□□ -0.36
COL4A3-202ENST00000396578 CTSFQ9UBX1 484 aa12.8□□□□□ -0.36
COL4A3-202ENST00000396578 CACFD1Q9UGQ2 172 aa12.8□□□□□ -0.36
COL4A3-202ENST00000396578 KCPQ6ZWJ8 1503 aa12.8□□□□□ -0.36
COL4A3-202ENST00000396578 ASXL3Q9C0F0 2248 aa12.79□□□□□ -0.36
COL4A3-202ENST00000396578 ZNF320A2RRD8 509 aa12.79□□□□□ -0.36
COL4A3-202ENST00000396578 TUBAL3A6NHL2 446 aa12.79□□□□□ -0.36
COL4A3-202ENST00000396578 SIGLEC6O43699 453 aa12.79□□□□□ -0.36
COL4A3-202ENST00000396578 CD1EP15812 388 aa12.79□□□□□ -0.36
COL4A3-202ENST00000396578 LPAL2Q16609 132 aa12.79□□□□□ -0.36
COL4A3-202ENST00000396578 BHLHE23Q8NDY6 225 aa12.79□□□□□ -0.36
COL4A3-202ENST00000396578 GPR119Q8TDV5 335 aa12.79□□□□□ -0.36
COL4A3-202ENST00000396578 LHX4Q969G2 390 aa12.79□□□□□ -0.36
COL4A3-202ENST00000396578 ACOXLQ9NUZ1 547 aa12.79□□□□□ -0.36
COL4A3-202ENST00000396578 TRPM6Q9BX84 2022 aa12.79□□□□□ -0.36
COL4A3-202ENST00000396578 FITM1A5D6W6 292 aa12.79□□□□□ -0.36
COL4A3-202ENST00000396578 RPL27P61353 136 aaKnown RBP12.79□□□□□ -0.36
COL4A3-202ENST00000396578 PRTGQ2VWP7 1150 aa12.79□□□□□ -0.36
COL4A3-202ENST00000396578 AGBL5Q8NDL9 886 aa12.79□□□□□ -0.36
COL4A3-202ENST00000396578 DYNC2LI1Q8TCX1 351 aa12.79□□□□□ -0.36
COL4A3-202ENST00000396578 TOLLIPQ9H0E2 274 aa12.79□□□□□ -0.36
COL4A3-202ENST00000396578 UCK1Q9HA47 277 aa12.79□□□□□ -0.36
COL4A3-202ENST00000396578 MMACHCQ9Y4U1 282 aa12.79□□□□□ -0.36
COL4A3-202ENST00000396578 OR5G3P0C626 314 aa12.79□□□□□ -0.36
COL4A3-202ENST00000396578 GABRB1P18505 474 aa12.79□□□□□ -0.36
COL4A3-202ENST00000396578 MANEAQ5SRI9 462 aa12.79□□□□□ -0.36
COL4A3-202ENST00000396578 DGAT2L6Q6ZPD8 337 aa12.79□□□□□ -0.36
COL4A3-202ENST00000396578 ZDHHC11Q9H8X9 412 aa12.79□□□□□ -0.36
COL4A3-202ENST00000396578 OR2J3O76001 311 aa12.79□□□□□ -0.36
COL4A3-202ENST00000396578 RAD52P43351 418 aa12.79□□□□□ -0.36
COL4A3-202ENST00000396578 OR10G3Q8NGC4 313 aa12.79□□□□□ -0.36
COL4A3-202ENST00000396578 CIB3Q96Q77 187 aaPredicted RBP12.79□□□□□ -0.36
COL4A3-202ENST00000396578 C12orf49Q9H741 205 aa12.79□□□□□ -0.36
COL4A3-202ENST00000396578 KNTC1P50748 2209 aa12.79□□□□□ -0.36
COL4A3-202ENST00000396578 N4BP2Q86UW6 1770 aaPredicted RBP12.79□□□□□ -0.36
COL4A3-202ENST00000396578 SNRPGP15A8MWD9 76 aa12.79□□□□□ -0.36
COL4A3-202ENST00000396578 GFRA2O00451 464 aa12.79□□□□□ -0.36
COL4A3-202ENST00000396578 COX5AP20674 150 aa12.79□□□□□ -0.36
COL4A3-202ENST00000396578 PPP1CBP62140 327 aa12.79□□□□□ -0.36
COL4A3-202ENST00000396578 EGR3Q06889 387 aa12.79□□□□□ -0.36
COL4A3-202ENST00000396578 COL13A1Q5TAT6 717 aaPredicted RBP12.79□□□□□ -0.36
COL4A3-202ENST00000396578 SLC48A1Q6P1K1 146 aa12.79□□□□□ -0.36
COL4A3-202ENST00000396578 COA3Q9Y2R0 106 aaPredicted RBP12.79□□□□□ -0.36
COL4A3-202ENST00000396578 MYADML2A6NDP7 307 aa12.79□□□□□ -0.36
COL4A3-202ENST00000396578 RPL7P18124 248 aaKnown RBP12.79□□□□□ -0.36
COL4A3-202ENST00000396578 TMEM97Q5BJF2 176 aa12.79□□□□□ -0.36
COL4A3-202ENST00000396578 COMMD1Q8N668 190 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms