RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 MCOLN3Q8TDD5 553 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 TMEM80Q96HE8 168 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 COL21A1Q96P44 957 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 STACQ99469 402 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 AGMATQ9BSE5 352 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 DHX35Q9H5Z1 703 aaKnown RBP4.09□□□□□ -1.75
GABPB1-204ENST00000396464 SIAEQ9HAT2 523 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 B3GNT2Q9NY97 397 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 PRODH2Q9UF12 536 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 CIDEBQ9UHD4 219 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 SPATA2Q9UM82 520 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 USH1CQ9Y6N9 552 aa4.09□□□□□ -1.75
GABPB1-204ENST00000396464 HECW1Q76N89 1606 aa4.09□□□□□ -1.76
GABPB1-204ENST00000396464 CLASP1Q7Z460 1538 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 KIAA0586Q9BVV6 1533 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 SMIM35A0A1B0GVV1 85 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 MEIOCA2RUB1 952 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 FUOMA2VDF0 154 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 LYRM9A8MSI8 78 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 C9J4A7 227 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 SULT2B1O00204 365 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 CCRL2O00421 344 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 CDIPTO14735 213 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 NTN1O95631 604 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 TNNC2P02585 160 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 LIMS3P0CW19 117 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 LIMS4P0CW20 117 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 IGHV4-38-2P0DP08 117 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 SELEP16581 610 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 UGT2B7P16662 529 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 ATP6V1B2P21281 511 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 GNRHRP30968 328 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 FCGR2CP31995 323 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 PSMD7P51665 324 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 FOXG1P55316 489 aaPredicted RBP4.08□□□□□ -1.76
GABPB1-204ENST00000396464 GAGE5Q13069 117 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 GAGE6Q13070 117 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 ECSCRQ19T08 205 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 ZBED5Q49AG3 693 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 OGFRL1Q5TC84 451 aaPredicted RBP4.08□□□□□ -1.76
GABPB1-204ENST00000396464 HACD4Q5VWC8 232 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 RUSC1-AS1Q66K80 236 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 ZNF57Q68EA5 555 aaPredicted RBP4.08□□□□□ -1.76
GABPB1-204ENST00000396464 MED27Q6P2C8 311 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 RBM23Q86U06 439 aaKnown RBP4.08□□□□□ -1.76
GABPB1-204ENST00000396464 LHFPL3Q86UP9 236 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 CALHM1Q8IU99 346 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 CBLN2Q8IUK8 224 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 BLIDQ8IZY5 108 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 PUSL1Q8N0Z8 303 aaKnown RBP4.08□□□□□ -1.76
GABPB1-204ENST00000396464 NANOGP1Q8N7R0 232 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 CCDC54Q8NEL0 328 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 ZNF564Q8TBZ8 553 aaPredicted RBP4.08□□□□□ -1.76
GABPB1-204ENST00000396464 RNF138Q8WVD3 245 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 PCNPQ8WW12 178 aaKnown RBP4.08□□□□□ -1.76
GABPB1-204ENST00000396464 APH1BQ8WW43 257 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 EEF1AKMT3Q96AZ1 226 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 FBXO17Q96EF6 278 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 MS4A14Q96JA4 679 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 NOL4LQ96MY1 436 aaPredicted RBP4.08□□□□□ -1.76
GABPB1-204ENST00000396464 ALKBH3Q96Q83 286 aaPredicted RBP4.08□□□□□ -1.76
GABPB1-204ENST00000396464 GPR22Q99680 433 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 MCHR1Q99705 422 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 MRPS26Q9BYN8 205 aaKnown RBP4.08□□□□□ -1.76
GABPB1-204ENST00000396464 CHIAQ9BZP6 476 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 FKRPQ9H9S5 495 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 ABCB9Q9NP78 766 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 ACOT13Q9NPJ3 140 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 OCIAD1Q9NX40 245 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 SLC2A6Q9UGQ3 507 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 MMP17Q9ULZ9 603 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 L3MBTL1Q9Y468 752 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 PCF11O94913 1555 aaKnown RBP4.08□□□□□ -1.76
GABPB1-204ENST00000396464 SAMD9Q5K651 1589 aa4.08□□□□□ -1.76
GABPB1-204ENST00000396464 NUP160Q12769 1436 aa4.07□□□□□ -1.76
GABPB1-204ENST00000396464 PRG4Q92954 1404 aaPredicted RBP4.07□□□□□ -1.76
GABPB1-204ENST00000396464 RAB3GAP2Q9H2M9 1393 aa4.07□□□□□ -1.76
GABPB1-204ENST00000396464 SHROOM2Q13796 1616 aa4.07□□□□□ -1.76
GABPB1-204ENST00000396464 RAPGEF6Q8TEU7 1601 aa4.07□□□□□ -1.76
GABPB1-204ENST00000396464 IGLV5-37A0A075B6J1 123 aa4.07□□□□□ -1.76
GABPB1-204ENST00000396464 TRBV5-4A0A0C4DH59 114 aa4.07□□□□□ -1.76
GABPB1-204ENST00000396464 KIR2DL5BA0A0G2JN68 375 aa4.07□□□□□ -1.76
GABPB1-204ENST00000396464 KIR2DL5BA0A0G2JPC4 375 aa4.07□□□□□ -1.76
GABPB1-204ENST00000396464 LOC100131303A0A0U1RQF7 123 aa4.07□□□□□ -1.76
GABPB1-204ENST00000396464 GJE1A6NN92 205 aa4.07□□□□□ -1.76
GABPB1-204ENST00000396464 FAM166BA8MTA8 275 aa4.07□□□□□ -1.76
GABPB1-204ENST00000396464 LOC110117498-PIK3R3F6TDL0 507 aa4.07□□□□□ -1.76
GABPB1-204ENST00000396464 H7C2Y5 167 aa4.07□□□□□ -1.76
GABPB1-204ENST00000396464 TNFRSF13BO14836 293 aaPredicted RBP4.07□□□□□ -1.76
GABPB1-204ENST00000396464 CDC40O60508 579 aaKnown RBP eCLIP4.07□□□□□ -1.76
GABPB1-204ENST00000396464 FKBP6O75344 327 aa4.07□□□□□ -1.76
GABPB1-204ENST00000396464 SRP72O76094 671 aaKnown RBP4.07□□□□□ -1.76
GABPB1-204ENST00000396464 SNAP29O95721 258 aa4.07□□□□□ -1.76
GABPB1-204ENST00000396464 TBX6O95947 436 aaPredicted RBP4.07□□□□□ -1.76
GABPB1-204ENST00000396464 SERPINA1P01009 418 aa4.07□□□□□ -1.76
GABPB1-204ENST00000396464 TSHBP01222 138 aa4.07□□□□□ -1.76
GABPB1-204ENST00000396464 APOEP02649 317 aa4.07□□□□□ -1.76
GABPB1-204ENST00000396464 HMGN1P05114 100 aa4.07□□□□□ -1.76
GABPB1-204ENST00000396464 CT45A6P0DMU7 189 aa4.07□□□□□ -1.76
GABPB1-204ENST00000396464 CT45A5P0DMU8 189 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms