RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 MT-CO3P00414 261 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 NOVA1P51513 510 aaKnown RBP3.05□□□□□ -1.92
VPS13C-203ENST00000395896 ARF1P84077 181 aaKnown RBP3.05□□□□□ -1.92
VPS13C-203ENST00000395896 POU4F3Q15319 338 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 SWI5Q1ZZU3 235 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 DCAF10Q5QP82 559 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 PRSS41Q7RTY9 318 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 DCXRQ7Z4W1 244 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 ATOH1Q92858 354 aaPredicted RBP3.05□□□□□ -1.92
VPS13C-203ENST00000395896 RAB3CQ96E17 227 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 BARHL1Q9BZE3 327 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 ACOXLQ9NUZ1 547 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 IGKV3D-11A0A0A0MRZ8 115 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 KANTRA0A1W2PQU2 76 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 RNF212BA8MTL3 300 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 TOR1AO14656 332 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 SLC22A5O76082 557 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 PMS2P2O95744 297 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 CRYAAP02489 173 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 AVPR2P30518 371 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 IL13RA1P78552 427 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 GLYATL3Q5SZD4 288 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 TSEN54Q7Z6J9 526 aaKnown RBP3.05□□□□□ -1.92
VPS13C-203ENST00000395896 ANKRD37Q7Z713 158 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 LINC00346Q8IVM7 164 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 SGPP2Q8IWX5 399 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 PFN4Q8NHR9 129 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 OR5M11Q96RB7 305 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 SMAD5Q99717 465 aaKnown RBP3.05□□□□□ -1.92
VPS13C-203ENST00000395896 BARD1Q99728 777 aaKnown RBP3.05□□□□□ -1.92
VPS13C-203ENST00000395896 CHMP1AQ9HD42 196 aaPredicted RBP3.05□□□□□ -1.92
VPS13C-203ENST00000395896 STEAP1Q9UHE8 339 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 LRP4O75096 1905 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 J3QRK9 145 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 DHHO43323 396 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 SLC34A2O95436 690 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 RAB3DO95716 219 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 H2AFB2P0C5Z0 115 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 LIPCP11150 499 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 ZFP36L2P47974 494 aaKnown RBP3.05□□□□□ -1.92
VPS13C-203ENST00000395896 MTCP1P56278 107 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 CHAF1BQ13112 559 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 GGTLC2Q14390 218 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 SLC17A1Q14916 467 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 P2RY6Q15077 328 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 TEX30Q5JUR7 227 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 MTFR2Q6P444 385 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 NPSR1Q6W5P4 371 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 OR11G2Q8NGC1 345 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 TMIGD2Q96BF3 282 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 KCNJ15Q99712 375 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 CHST6Q9GZX3 395 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 CDC42EP2O14613 210 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 GMFGO60234 142 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 EML2O95834 649 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 EPXP11678 715 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 ACAA2P42765 397 aaKnown RBP3.05□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF117Q03924 483 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 LTBQ06643 244 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 CDK10Q15131 360 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 PNLIPRP3Q17RR3 467 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 CBLN3Q6UW01 205 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 S100A7AQ86SG5 101 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 GALNT16Q8N428 558 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 OR2V1Q8NHB1 315 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 FAM3DQ96BQ1 224 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 OR14A2Q96R54 314 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 MICU1Q9BPX6 476 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 CDCP1Q9H5V8 836 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 LIN7BQ9HAP6 207 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 SLC22A11Q9NSA0 550 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 RBMXL2O75526 392 aaKnown RBP3.05□□□□□ -1.92
VPS13C-203ENST00000395896 SEC61A1P61619 476 aaKnown RBP3.05□□□□□ -1.92
VPS13C-203ENST00000395896 GXYLT1Q4G148 440 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 FAM109AQ8N4B1 249 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 PRELID1Q9Y255 219 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 EYSQ5T1H1 3165 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 PRKRAO75569 313 aaKnown RBP3.05□□□□□ -1.92
VPS13C-203ENST00000395896 HTR5AP47898 357 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 TFF2Q03403 129 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 PIGFQ07326 219 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 GPR119Q8TDV5 335 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 TWSG1Q9GZX9 223 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 RNF32Q9H0A6 362 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 TMEM185BQ9H7F4 350 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF175Q9Y473 711 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 TSPAN2O60636 221 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 TSPAN9O75954 239 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 RGS11O94810 467 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 CSRP2Q16527 193 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 BCL2A1Q16548 175 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 TBC1D28Q2M2D7 210 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 FCRLAQ7L513 359 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 ZBTB46Q86UZ6 589 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 OR5H2Q8NGV7 314 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 DNTTIP1Q9H147 329 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 OR5B21A6NL26 309 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 MCRIP1C9JLW8 97 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 APOL3O95236 402 aa3.05□□□□□ -1.92
VPS13C-203ENST00000395896 TMEM225BP0DP42 221 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms