RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 ZNF502Q8TBZ5 544 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 TEX47Q8TBZ9 253 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 ECHDC3Q96DC8 303 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 OTUB2Q96DC9 234 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 ASB9Q96DX5 294 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 TMEM101Q96IK0 257 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 PRRG3Q9BZD7 231 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 NXF3Q9H4D5 531 aaKnown RBP3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 PLGRKTQ9HBL7 147 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 SLC17A4Q9Y2C5 497 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 RBMX2Q9Y388 322 aaKnown RBP3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 SLC25A15Q9Y619 301 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 SRCAPQ6ZRS2 3230 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 ADGRL1O94910 1474 aa3.52□□□□□ -1.85
HMGB1P10-201ENST00000395823 ROCK1Q13464 1354 aa3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 MAP3K15Q6ZN16 1313 aa3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 KBTBD11-OT1A0A1B0GTJ5 212 aa3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 USP27XA6NNY8 438 aa3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 TRAF3IP2O43734 574 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 EIF4E2O60573 245 aaKnown RBP3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 HUS1O60921 280 aa3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 NSA2O95478 260 aaKnown RBP3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 MOSP00540 346 aa3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 ALDOBP05062 364 aa3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 IL6P05231 212 aa3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 SERPINA6P08185 405 aa3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 GOLGA8HP0CJ92 632 aa3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 MYL2P10916 166 aa3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 FOXN2P32314 431 aa3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 P2RY2P41231 377 aa3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 CDKN2CP42773 168 aa3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 CLDN18P56856 261 aa3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 REEP5Q00765 189 aa3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 GLO1Q04760 184 aa3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 KRTAP1-1Q07627 177 aa3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 PMS2P3Q13401 168 aa3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 ORC2Q13416 577 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 C18orf21Q32NC0 220 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 PAGE3Q5JUK9 113 aa3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 MFSD14CQ5VZR4 134 aa3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 OR52W1Q6IF63 320 aa3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 LCN12Q6JVE5 192 aa3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 ACP7Q6ZNF0 438 aa3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 SELENOHQ8IZQ5 122 aaKnown RBP3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 PRELID2Q8N945 189 aa3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 TTLQ8NG68 377 aa3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 OR51L1Q8NGJ5 315 aa3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 NDRG1Q92597 394 aaKnown RBP3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 UCN3Q969E3 161 aa3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 CTRCQ99895 268 aa3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 HINT2Q9BX68 163 aa3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 UPF3BQ9BZI7 483 aaKnown RBP3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 OR11A1Q9GZK7 315 aa3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 MYOZ2Q9NPC6 264 aa3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 USE1Q9NZ43 259 aa3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 CLN8Q9UBY8 286 aa3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 NAGKQ9UJ70 344 aa3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 V9GYQ6 96 aa3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 PLEKHG1Q9ULL1 1385 aa3.51□□□□□ -1.85
HMGB1P10-201ENST00000395823 PLB1Q6P1J6 1458 aa3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 KCNE1BA0A087WTH5 132 aa3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 GLYATL1P3A0A0U1RQE8 302 aa3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 A0A1B0GVI7 797 aa3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 F6UB75 175 aa3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 CDC7O00311 574 aa3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 GPR171O14626 319 aa3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 TOR1AO14656 332 aa3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 LIN7AO14910 233 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 SCAMP2O15127 329 aaKnown RBP3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 SEMA3DO95025 777 aa3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 FADS2O95864 444 aaKnown RBP3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 GKN3PP0CG01 181 aa3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 CX3CR1P49238 355 aa3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 MRPL19P49406 292 aaKnown RBP3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 UGT2B15P54855 530 aa3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 PSMD4P55036 377 aaKnown RBP3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 UBE2G2P60604 165 aa3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 SLC25A11Q02978 314 aaKnown RBP3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 STX3Q13277 289 aa3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 CAPRIN1Q14444 709 aaKnown RBP3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 IL17AQ16552 155 aa3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 XKR4Q5GH76 650 aa3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 CDKL4Q5MAI5 379 aa3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 C6orf183Q5T699 404 aa3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 ULK3Q6PHR2 472 aa3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 RNF165Q6ZSG1 346 aa3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 USP50Q70EL3 339 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 PAGE2Q7Z2X7 111 aa3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 ABHD12BQ7Z5M8 362 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 ARHGAP18Q8N392 663 aa3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 FAM86B1Q8N7N1 296 aa3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 OR10R2Q8NGX6 335 aa3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 LINC01006Q8NI28 216 aa3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 CXorf40AQ8TE69 158 aa3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 ESR2Q92731 530 aa3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 GTF2H4Q92759 462 aa3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 FAM131CQ96AQ9 280 aa3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 TMA16Q96EY4 203 aaKnown RBP3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 ZNF514Q96K75 400 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P10-201ENST00000395823 C7orf50Q9BRJ6 194 aaKnown RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms