RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 SYPL1Q16563 259 aa6.55□□□□□ -1.36
CASP4-201ENST00000393150 SMU1Q2TAY7 513 aa6.55□□□□□ -1.36
CASP4-201ENST00000393150 C6orf136Q5SQH8 315 aa6.55□□□□□ -1.36
CASP4-201ENST00000393150 CEP85LQ5SZL2 805 aa6.55□□□□□ -1.36
CASP4-201ENST00000393150 HDDC2Q7Z4H3 204 aa6.55□□□□□ -1.36
CASP4-201ENST00000393150 PXKQ7Z7A4 578 aa6.55□□□□□ -1.36
CASP4-201ENST00000393150 KLBQ86Z14 1044 aa6.55□□□□□ -1.36
CASP4-201ENST00000393150 CLECL1Q8IZS7 167 aa6.55□□□□□ -1.36
CASP4-201ENST00000393150 PNLDC1Q8NA58 520 aaKnown RBP6.55□□□□□ -1.36
CASP4-201ENST00000393150 OR2Z1Q8NG97 314 aa6.55□□□□□ -1.36
CASP4-201ENST00000393150 OR8J2Q8NGG1 315 aa6.55□□□□□ -1.36
CASP4-201ENST00000393150 KLF14Q8TD94 323 aaPredicted RBP6.55□□□□□ -1.36
CASP4-201ENST00000393150 STON2Q8WXE9 905 aa6.55□□□□□ -1.36
CASP4-201ENST00000393150 IFT81Q8WYA0 676 aa6.55□□□□□ -1.36
CASP4-201ENST00000393150 MARS2Q96GW9 593 aaKnown RBP6.55□□□□□ -1.36
CASP4-201ENST00000393150 CLPTM1LQ96KA5 538 aa6.55□□□□□ -1.36
CASP4-201ENST00000393150 COG8Q96MW5 612 aa6.55□□□□□ -1.36
CASP4-201ENST00000393150 ZNF75AQ96N20 296 aa6.55□□□□□ -1.36
CASP4-201ENST00000393150 SH3GL3Q99963 347 aa6.55□□□□□ -1.36
CASP4-201ENST00000393150 NUF2Q9BZD4 464 aa6.55□□□□□ -1.36
CASP4-201ENST00000393150 SLC38A1Q9H2H9 487 aa6.55□□□□□ -1.36
CASP4-201ENST00000393150 AURKAIP1Q9NWT8 199 aaPredicted RBP6.55□□□□□ -1.36
CASP4-201ENST00000393150 GLTPQ9NZD2 209 aa6.55□□□□□ -1.36
CASP4-201ENST00000393150 PSMC3IPQ9P2W1 217 aaPredicted RBP6.55□□□□□ -1.36
CASP4-201ENST00000393150 B3GAT1Q9P2W7 334 aa6.55□□□□□ -1.36
CASP4-201ENST00000393150 IL19Q9UHD0 177 aa6.55□□□□□ -1.36
CASP4-201ENST00000393150 USH1CQ9Y6N9 552 aa6.55□□□□□ -1.36
CASP4-201ENST00000393150 TET2Q6N021 2002 aaPredicted RBP6.55□□□□□ -1.36
CASP4-201ENST00000393150 F5H0A9 414 aaPredicted RBP6.54□□□□□ -1.36
CASP4-201ENST00000393150 G3V2L1 256 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 HMGN4O00479 90 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 COPEO14579 308 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 PEX14O75381 377 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 FBP1P09467 338 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 G6PDP11413 515 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 NR2C1P13056 603 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 CBLP22681 906 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 EEF1B2P24534 225 aaKnown RBP6.54□□□□□ -1.36
CASP4-201ENST00000393150 EPHA3P29320 983 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 ACAA2P42765 397 aaKnown RBP6.54□□□□□ -1.36
CASP4-201ENST00000393150 NPY4RP50391 375 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 MMP15P51511 669 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 BIDP55957 195 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 CLRN1P58418 232 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 KRTAP10-3P60369 221 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 ERVS71-1P61550 626 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 PPP1CBP62140 327 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 VSNL1P62760 191 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 EMX2Q04743 252 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 ZMYND11Q15326 602 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 ALG10BQ5I7T1 473 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 PHYHD1Q5SRE7 291 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 SPATA46Q5T0L3 261 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 RNF220Q5VTB9 566 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 ZNF621Q6ZSS3 439 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 ANKRD46Q86W74 232 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 ZNF584Q8IVC4 421 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 RIMKLAQ8IXN7 391 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 ANKFN1Q8N957 763 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 ATG16L2Q8NAA4 619 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 OR4K5Q8NGD3 323 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 OR6S1Q8NH40 331 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 OR2T6Q8NHC8 308 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 SLC25A40Q8TBP6 338 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 TAAR8Q969N4 342 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 SLC35B4Q969S0 331 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 PANX1Q96RD7 426 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 ARHGDIGQ99819 225 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 OR2J1Q9GZK6 312 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 TUBB1Q9H4B7 451 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 TMEM27Q9HBJ8 222 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 MSL2Q9HCI7 577 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 TMEM38BQ9NVV0 291 aa6.54□□□□□ -1.36
CASP4-201ENST00000393150 MRPL39Q9NYK5 338 aaKnown RBP6.54□□□□□ -1.36
CASP4-201ENST00000393150 STX18Q9P2W9 335 aaKnown RBP6.54□□□□□ -1.36
CASP4-201ENST00000393150 ZNF443Q9Y2A4 671 aaPredicted RBP6.54□□□□□ -1.36
CASP4-201ENST00000393150 SOX21Q9Y651 276 aaPredicted RBP6.54□□□□□ -1.36
CASP4-201ENST00000393150 A0A0G2JPF8 293 aa6.53□□□□□ -1.36
CASP4-201ENST00000393150 GMNCA6NCL1 334 aa6.53□□□□□ -1.36
CASP4-201ENST00000393150 ZSCAN5BA6NJL1 495 aa6.53□□□□□ -1.36
CASP4-201ENST00000393150 HNRNPCL2B2RXH8 293 aa6.53□□□□□ -1.36
CASP4-201ENST00000393150 HNRNPCL3B7ZW38 293 aa6.53□□□□□ -1.36
CASP4-201ENST00000393150 MCIDASD6RGH6 385 aa6.53□□□□□ -1.36
CASP4-201ENST00000393150 RNASEK-C17orf49H0YIS7 233 aa6.53□□□□□ -1.36
CASP4-201ENST00000393150 C3orf84H3BNL1 204 aa6.53□□□□□ -1.36
CASP4-201ENST00000393150 TMEM178BH3BS89 294 aa6.53□□□□□ -1.36
CASP4-201ENST00000393150 PHYHO14832 338 aa6.53□□□□□ -1.36
CASP4-201ENST00000393150 SLC16A6O15403 523 aa6.53□□□□□ -1.36
CASP4-201ENST00000393150 RNF13O43567 381 aa6.53□□□□□ -1.36
CASP4-201ENST00000393150 HNRNPCL1O60812 293 aaKnown RBP6.53□□□□□ -1.36
CASP4-201ENST00000393150 TSPAN9O75954 239 aa6.53□□□□□ -1.36
CASP4-201ENST00000393150 IGHG1P01857 330 aa6.53□□□□□ -1.36
CASP4-201ENST00000393150 HNRNPCL4P0DMR1 293 aa6.53□□□□□ -1.36
CASP4-201ENST00000393150 ADORA3P0DMS8 318 aa6.53□□□□□ -1.36
CASP4-201ENST00000393150 RPS4Y1P22090 263 aaKnown RBP6.53□□□□□ -1.36
CASP4-201ENST00000393150 IER3P46695 156 aa6.53□□□□□ -1.36
CASP4-201ENST00000393150 SRP9P49458 86 aaKnown RBP6.53□□□□□ -1.36
CASP4-201ENST00000393150 PCBD1P61457 104 aa6.53□□□□□ -1.36
CASP4-201ENST00000393150 SEC61A1P61619 476 aaKnown RBP6.53□□□□□ -1.36
CASP4-201ENST00000393150 ULK3Q6PHR2 472 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms