RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 IGKV3D-15A0A087WSY6 115 aa10.12□□□□□ -0.79
SMARCAL1-203ENST00000392128 TMEM269A0A1B0GVZ9 245 aa10.12□□□□□ -0.79
SMARCAL1-203ENST00000392128 CEACAM4O75871 244 aa10.12□□□□□ -0.79
SMARCAL1-203ENST00000392128 ATF1P18846 271 aa10.12□□□□□ -0.79
SMARCAL1-203ENST00000392128 NTF4P34130 210 aa10.12□□□□□ -0.79
SMARCAL1-203ENST00000392128 SOX2P48431 317 aa10.12□□□□□ -0.79
SMARCAL1-203ENST00000392128 ZNF84P51523 738 aa10.12□□□□□ -0.79
SMARCAL1-203ENST00000392128 OXA1LQ15070 435 aa10.12□□□□□ -0.79
SMARCAL1-203ENST00000392128 ODF4Q2M2E3 257 aa10.12□□□□□ -0.79
SMARCAL1-203ENST00000392128 SMUG1Q53HV7 270 aa10.12□□□□□ -0.79
SMARCAL1-203ENST00000392128 CNIH2Q6PI25 160 aa10.12□□□□□ -0.79
SMARCAL1-203ENST00000392128 KLHL24Q6TFL4 600 aa10.12□□□□□ -0.79
SMARCAL1-203ENST00000392128 STAC2Q6ZMT1 411 aa10.12□□□□□ -0.79
SMARCAL1-203ENST00000392128 AAED1Q7RTV5 226 aa10.12□□□□□ -0.79
SMARCAL1-203ENST00000392128 LRRC28Q86X40 367 aaPredicted RBP10.12□□□□□ -0.79
SMARCAL1-203ENST00000392128 NABP1Q96AH0 204 aa10.12□□□□□ -0.79
SMARCAL1-203ENST00000392128 ORAI1Q96D31 301 aa10.12□□□□□ -0.79
SMARCAL1-203ENST00000392128 GFI1Q99684 422 aa10.12□□□□□ -0.79
SMARCAL1-203ENST00000392128 SLC25A18Q9H1K4 315 aa10.12□□□□□ -0.79
SMARCAL1-203ENST00000392128 NIPAL2Q9H841 368 aa10.12□□□□□ -0.79
SMARCAL1-203ENST00000392128 TCF7L1Q9HCS4 588 aa10.12□□□□□ -0.79
SMARCAL1-203ENST00000392128 PNRC2Q9NPJ4 139 aaKnown RBP10.12□□□□□ -0.79
SMARCAL1-203ENST00000392128 FAM206AQ9NX38 181 aa10.12□□□□□ -0.79
SMARCAL1-203ENST00000392128 CEP250Q9BV73 2442 aa10.11□□□□□ -0.79
SMARCAL1-203ENST00000392128 SLC2A2P11168 524 aaPredicted RBP10.11□□□□□ -0.79
SMARCAL1-203ENST00000392128 CBX3Q13185 183 aa10.11□□□□□ -0.79
SMARCAL1-203ENST00000392128 ZNF704Q6ZNC4 412 aaPredicted RBP10.11□□□□□ -0.79
SMARCAL1-203ENST00000392128 NCCRP1Q6ZVX7 275 aaPredicted RBP10.11□□□□□ -0.79
SMARCAL1-203ENST00000392128 GDPD1Q8N9F7 314 aa10.11□□□□□ -0.79
SMARCAL1-203ENST00000392128 ABHD3Q8WU67 409 aa10.11□□□□□ -0.79
SMARCAL1-203ENST00000392128 TSEN15Q8WW01 171 aaKnown RBP10.11□□□□□ -0.79
SMARCAL1-203ENST00000392128 PPP1R14AQ96A00 147 aa10.11□□□□□ -0.79
SMARCAL1-203ENST00000392128 ZNF416Q9BWM5 594 aa10.11□□□□□ -0.79
SMARCAL1-203ENST00000392128 ZDHHC11Q9H8X9 412 aa10.11□□□□□ -0.79
SMARCAL1-203ENST00000392128 NCOA6Q14686 2063 aaPredicted RBP10.11□□□□□ -0.79
SMARCAL1-203ENST00000392128 UBCP0CG48 685 aaKnown RBP10.11□□□□□ -0.79
SMARCAL1-203ENST00000392128 ACHEP22303 614 aa10.11□□□□□ -0.79
SMARCAL1-203ENST00000392128 MRPS34P82930 218 aaKnown RBP10.11□□□□□ -0.79
SMARCAL1-203ENST00000392128 SRYQ05066 204 aa10.11□□□□□ -0.79
SMARCAL1-203ENST00000392128 RIN1Q13671 783 aa10.11□□□□□ -0.79
SMARCAL1-203ENST00000392128 ENDOGQ14249 297 aaKnown RBP10.11□□□□□ -0.79
SMARCAL1-203ENST00000392128 SGCAQ16586 387 aa10.11□□□□□ -0.79
SMARCAL1-203ENST00000392128 TRIM16LQ309B1 348 aa10.11□□□□□ -0.79
SMARCAL1-203ENST00000392128 DEFB109BQ30KR1 87 aa10.11□□□□□ -0.79
SMARCAL1-203ENST00000392128 RIPPLY2Q5TAB7 128 aa10.11□□□□□ -0.79
SMARCAL1-203ENST00000392128 BCL2L15Q5TBC7 163 aa10.11□□□□□ -0.79
SMARCAL1-203ENST00000392128 LRRTM1Q86UE6 522 aa10.11□□□□□ -0.79
SMARCAL1-203ENST00000392128 TRMT10AQ8TBZ6 339 aaKnown RBP10.11□□□□□ -0.79
SMARCAL1-203ENST00000392128 GIMAP1Q8WWP7 306 aa10.11□□□□□ -0.79
SMARCAL1-203ENST00000392128 HTRA1Q92743 480 aa10.11□□□□□ -0.79
SMARCAL1-203ENST00000392128 ZNF775Q96BV0 537 aaPredicted RBP10.11□□□□□ -0.79
SMARCAL1-203ENST00000392128 SMAD5Q99717 465 aaKnown RBP10.11□□□□□ -0.79
SMARCAL1-203ENST00000392128 RBM24Q9BX46 236 aaKnown RBP10.11□□□□□ -0.79
SMARCAL1-203ENST00000392128 MOB1AQ9H8S9 216 aa10.11□□□□□ -0.79
SMARCAL1-203ENST00000392128 MCTS1Q9ULC4 181 aaKnown RBP10.11□□□□□ -0.79
SMARCAL1-203ENST00000392128 CSAG2Q9Y5P2 127 aa10.11□□□□□ -0.79
SMARCAL1-203ENST00000392128 V9GY05 133 aa10.11□□□□□ -0.79
SMARCAL1-203ENST00000392128 IFITM5A6NNB3 132 aa10.1□□□□□ -0.79
SMARCAL1-203ENST00000392128 AIPO00170 330 aa10.1□□□□□ -0.79
SMARCAL1-203ENST00000392128 RER1O15258 196 aa10.1□□□□□ -0.79
SMARCAL1-203ENST00000392128 SYNGR4O95473 234 aa10.1□□□□□ -0.79
SMARCAL1-203ENST00000392128 ITGB2P05107 769 aa10.1□□□□□ -0.79
SMARCAL1-203ENST00000392128 ELK1P19419 428 aa10.1□□□□□ -0.79
SMARCAL1-203ENST00000392128 NPR2P20594 1047 aa10.1□□□□□ -0.79
SMARCAL1-203ENST00000392128 PSMA6P60900 246 aaKnown RBP10.1□□□□□ -0.79
SMARCAL1-203ENST00000392128 TMEM244Q5VVB8 128 aa10.1□□□□□ -0.79
SMARCAL1-203ENST00000392128 SAMD12Q8N8I0 201 aa10.1□□□□□ -0.79
SMARCAL1-203ENST00000392128 CPT1CQ8TCG5 803 aa10.1□□□□□ -0.79
SMARCAL1-203ENST00000392128 ASB5Q8WWX0 329 aa10.1□□□□□ -0.79
SMARCAL1-203ENST00000392128 COX4I2Q96KJ9 171 aa10.1□□□□□ -0.79
SMARCAL1-203ENST00000392128 PPP1R3EQ9H7J1 279 aa10.1□□□□□ -0.79
SMARCAL1-203ENST00000392128 CYSLTR2Q9NS75 346 aa10.1□□□□□ -0.79
SMARCAL1-203ENST00000392128 DDX28Q9NUL7 540 aaKnown RBP10.1□□□□□ -0.79
SMARCAL1-203ENST00000392128 HHLA2Q9UM44 414 aa10.1□□□□□ -0.79
SMARCAL1-203ENST00000392128 DHDHQ9UQ10 334 aa10.1□□□□□ -0.79
SMARCAL1-203ENST00000392128 LIPGQ9Y5X9 500 aa10.1□□□□□ -0.79
SMARCAL1-203ENST00000392128 KCNMB2Q9Y691 235 aa10.1□□□□□ -0.79
SMARCAL1-203ENST00000392128 ZNF407Q9C0G0 2248 aa10.1□□□□□ -0.79
SMARCAL1-203ENST00000392128 PAHP00439 452 aa10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 OCMP0CE72 109 aaPredicted RBP10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 HSD11B1P28845 292 aa10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 GRB2P62993 217 aaKnown RBP10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 HIST1H3AP68431 136 aa10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 RNFT1Q5M7Z0 435 aa10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 HIST2H3PS2Q5TEC6 136 aa10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 FAM27BQ5VT28 67 aa10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 HIST2H3AQ71DI3 136 aa10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 ELMOD2Q8IZ81 293 aa10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 OR8H2Q8N162 312 aa10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 GPR137CQ8N3F9 429 aa10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 GJC3Q8NFK1 279 aa10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 CMTM3Q96MX0 182 aa10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 MRI1Q9BV20 369 aa10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 RNF122Q9H9V4 155 aa10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 EMC3Q9P0I2 261 aa10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 SPATA2Q9UM82 520 aa10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 LAMA5O15230 3695 aa10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 DNAJC13O75165 2243 aa10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 TRAV8-7A0A075B6U6 113 aa10.09□□□□□ -0.79
SMARCAL1-203ENST00000392128 TRGV5A0A0B4J1U4 118 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms