RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 HRH1P35367 487 aa13.48□□□□□ -0.25
CTNS-202ENST00000381870 SULT1A1P50225 295 aa13.48□□□□□ -0.25
CTNS-202ENST00000381870 TOMM20Q15388 145 aa13.48□□□□□ -0.25
CTNS-202ENST00000381870 AWAT2Q6E213 333 aa13.48□□□□□ -0.25
CTNS-202ENST00000381870 TRAPPC6BQ86SZ2 158 aa13.48□□□□□ -0.25
CTNS-202ENST00000381870 GKN2Q86XP6 184 aa13.48□□□□□ -0.25
CTNS-202ENST00000381870 RAB42Q8N4Z0 105 aa13.48□□□□□ -0.25
CTNS-202ENST00000381870 ZCCHC10Q8TBK6 192 aa13.48□□□□□ -0.25
CTNS-202ENST00000381870 RNF128Q8TEB7 428 aa13.48□□□□□ -0.25
CTNS-202ENST00000381870 MALSU1Q96EH3 234 aa13.48□□□□□ -0.25
CTNS-202ENST00000381870 DCBLD2Q96PD2 775 aa13.48□□□□□ -0.25
CTNS-202ENST00000381870 PIGQQ9BRB3 760 aa13.48□□□□□ -0.25
CTNS-202ENST00000381870 SPACA1Q9HBV2 294 aa13.48□□□□□ -0.25
CTNS-202ENST00000381870 ZDHHC4Q9NPG8 344 aa13.48□□□□□ -0.25
CTNS-202ENST00000381870 FBXL21Q9UKT6 434 aa13.48□□□□□ -0.25
CTNS-202ENST00000381870 DCDC2BA2VCK2 349 aa13.47□□□□□ -0.25
CTNS-202ENST00000381870 PCCBP05166 539 aa13.47□□□□□ -0.25
CTNS-202ENST00000381870 PEBP1P30086 187 aaKnown RBP13.47□□□□□ -0.25
CTNS-202ENST00000381870 MAP3K8P41279 467 aa13.47□□□□□ -0.25
CTNS-202ENST00000381870 CX3CR1P49238 355 aa13.47□□□□□ -0.25
CTNS-202ENST00000381870 RASGEF1BQ0VAM2 473 aa13.47□□□□□ -0.25
CTNS-202ENST00000381870 ZNF239Q16600 458 aaKnown RBP13.47□□□□□ -0.25
CTNS-202ENST00000381870 NSUN5P2Q63ZY6 315 aa13.47□□□□□ -0.25
CTNS-202ENST00000381870 PRSS54Q6PEW0 395 aa13.47□□□□□ -0.25
CTNS-202ENST00000381870 RNF44Q7L0R7 432 aa13.47□□□□□ -0.25
CTNS-202ENST00000381870 ANGPTL5Q86XS5 388 aa13.47□□□□□ -0.25
CTNS-202ENST00000381870 TMEFF1Q8IYR6 380 aa13.47□□□□□ -0.25
CTNS-202ENST00000381870 MARCH1Q8TCQ1 289 aa13.47□□□□□ -0.25
CTNS-202ENST00000381870 CHST5Q9GZS9 411 aa13.47□□□□□ -0.25
CTNS-202ENST00000381870 DCAF16Q9NXF7 216 aa13.47□□□□□ -0.25
CTNS-202ENST00000381870 TAS2R4Q9NYW5 299 aa13.47□□□□□ -0.25
CTNS-202ENST00000381870 ARGFXA6NJG6 315 aa13.47□□□□□ -0.25
CTNS-202ENST00000381870 OR52A4PA6NMU1 304 aa13.47□□□□□ -0.25
CTNS-202ENST00000381870 SLC31A2O15432 143 aa13.47□□□□□ -0.25
CTNS-202ENST00000381870 OR10H2O60403 315 aa13.47□□□□□ -0.25
CTNS-202ENST00000381870 ADH1AP07327 375 aa13.47□□□□□ -0.25
CTNS-202ENST00000381870 ALOX5APP20292 161 aa13.47□□□□□ -0.25
CTNS-202ENST00000381870 SULT1A2P50226 295 aa13.47□□□□□ -0.25
CTNS-202ENST00000381870 RUNX2Q13950 521 aa13.47□□□□□ -0.25
CTNS-202ENST00000381870 KIAA0141Q14154 515 aaPredicted RBP13.47□□□□□ -0.25
CTNS-202ENST00000381870 TMEM225Q6GV28 225 aa13.47□□□□□ -0.25
CTNS-202ENST00000381870 ULK3Q6PHR2 472 aa13.47□□□□□ -0.25
CTNS-202ENST00000381870 CDRT4Q8N9R6 151 aa13.47□□□□□ -0.25
CTNS-202ENST00000381870 OR51A2Q8NGJ7 313 aa13.47□□□□□ -0.25
CTNS-202ENST00000381870 SLC25A43Q8WUT9 341 aaPredicted RBP13.47□□□□□ -0.25
CTNS-202ENST00000381870 COX14Q96I36 57 aa13.47□□□□□ -0.25
CTNS-202ENST00000381870 AQP10Q96PS8 301 aa13.47□□□□□ -0.25
CTNS-202ENST00000381870 KXD1Q9BQD3 176 aa13.47□□□□□ -0.25
CTNS-202ENST00000381870 PDE7BQ9NP56 450 aa13.47□□□□□ -0.25
CTNS-202ENST00000381870 SPHK2Q9NRA0 654 aa13.47□□□□□ -0.25
CTNS-202ENST00000381870 AMDHD2Q9Y303 409 aa13.47□□□□□ -0.25
CTNS-202ENST00000381870 ALPK2Q86TB3 2170 aa13.46□□□□□ -0.25
CTNS-202ENST00000381870 MOSPD3O75425 235 aa13.46□□□□□ -0.25
CTNS-202ENST00000381870 F13BP05160 661 aa13.46□□□□□ -0.25
CTNS-202ENST00000381870 RAB6AP20340 208 aa13.46□□□□□ -0.25
CTNS-202ENST00000381870 TSFMP43897 325 aaKnown RBP13.46□□□□□ -0.25
CTNS-202ENST00000381870 DEFB134Q4QY38 66 aa13.46□□□□□ -0.25
CTNS-202ENST00000381870 FAHD2BQ6P2I3 314 aaPredicted RBP13.46□□□□□ -0.25
CTNS-202ENST00000381870 ANKRD33Q7Z3H0 272 aa13.46□□□□□ -0.25
CTNS-202ENST00000381870 MFSD9Q8NBP5 474 aa13.46□□□□□ -0.25
CTNS-202ENST00000381870 RCBTB1Q8NDN9 531 aa13.46□□□□□ -0.25
CTNS-202ENST00000381870 S100PBPQ96BU1 408 aa13.46□□□□□ -0.25
CTNS-202ENST00000381870 FAHD2AQ96GK7 314 aa13.46□□□□□ -0.25
CTNS-202ENST00000381870 LMAN2LQ9H0V9 348 aa13.46□□□□□ -0.25
CTNS-202ENST00000381870 PARP11Q9NR21 331 aa13.46□□□□□ -0.25
CTNS-202ENST00000381870 KCNK6Q9Y257 313 aa13.46□□□□□ -0.25
CTNS-202ENST00000381870 ZNF860A6NHJ4 632 aa13.46□□□□□ -0.26
CTNS-202ENST00000381870 FKTNO75072 461 aa13.46□□□□□ -0.26
CTNS-202ENST00000381870 IFNA17P01571 189 aa13.46□□□□□ -0.26
CTNS-202ENST00000381870 CT62P0C5K7 136 aa13.46□□□□□ -0.26
CTNS-202ENST00000381870 PRKAR2AP13861 404 aaKnown RBP13.46□□□□□ -0.26
CTNS-202ENST00000381870 CDX1P47902 265 aaPredicted RBP13.46□□□□□ -0.26
CTNS-202ENST00000381870 RBP2P50120 134 aa13.46□□□□□ -0.26
CTNS-202ENST00000381870 NDUFA6P56556 154 aa13.46□□□□□ -0.26
CTNS-202ENST00000381870 CYCSP99999 105 aaKnown RBP13.46□□□□□ -0.26
CTNS-202ENST00000381870 SLC9A3R2Q15599 337 aa13.46□□□□□ -0.26
CTNS-202ENST00000381870 HMGN3Q15651 99 aa13.46□□□□□ -0.26
CTNS-202ENST00000381870 VN1R4Q7Z5H5 301 aa13.46□□□□□ -0.26
CTNS-202ENST00000381870 ADGRE4PQ86SQ3 457 aa13.46□□□□□ -0.26
CTNS-202ENST00000381870 ZNF565Q8N9K5 539 aa13.46□□□□□ -0.26
CTNS-202ENST00000381870 OR52E1Q8NGJ3 308 aa13.46□□□□□ -0.26
CTNS-202ENST00000381870 OR2L8Q8NGY9 312 aa13.46□□□□□ -0.26
CTNS-202ENST00000381870 CDC6Q99741 560 aa13.46□□□□□ -0.26
CTNS-202ENST00000381870 GFOD1Q9NXC2 390 aa13.46□□□□□ -0.26
CTNS-202ENST00000381870 ZNF107Q9UII5 783 aaPredicted RBP13.46□□□□□ -0.26
CTNS-202ENST00000381870 H7C1Q1 480 aa13.45□□□□□ -0.26
CTNS-202ENST00000381870 PNPP00491 289 aa13.45□□□□□ -0.26
CTNS-202ENST00000381870 PLGP00747 810 aaPredicted RBP13.45□□□□□ -0.26
CTNS-202ENST00000381870 CSTBP04080 98 aaKnown RBP13.45□□□□□ -0.26
CTNS-202ENST00000381870 S100A2P29034 98 aa13.45□□□□□ -0.26
CTNS-202ENST00000381870 CCR2P41597 374 aa13.45□□□□□ -0.26
CTNS-202ENST00000381870 SLC25A1P53007 311 aa13.45□□□□□ -0.26
CTNS-202ENST00000381870 TAS2R60P59551 318 aa13.45□□□□□ -0.26
CTNS-202ENST00000381870 RAB32Q13637 225 aa13.45□□□□□ -0.26
CTNS-202ENST00000381870 ACTBL2Q562R1 376 aa13.45□□□□□ -0.26
CTNS-202ENST00000381870 EEF1A1P5Q5VTE0 462 aa13.45□□□□□ -0.26
CTNS-202ENST00000381870 RTN4RL2Q86UN3 420 aa13.45□□□□□ -0.26
CTNS-202ENST00000381870 CCDC54Q8NEL0 328 aa13.45□□□□□ -0.26
CTNS-202ENST00000381870 OR4N2Q8NGD1 307 aa13.45□□□□□ -0.26
CTNS-202ENST00000381870 OR56B1Q8NGI3 324 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms