RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 C12orf54Q6X4T0 127 aa11.95□□□□□ -0.5
SHOX-202ENST00000381575 SYT9Q86SS6 491 aa11.95□□□□□ -0.5
SHOX-202ENST00000381575 FAM156AQ8NDB6 213 aa11.95□□□□□ -0.5
SHOX-202ENST00000381575 ITLN1Q8WWA0 313 aa11.95□□□□□ -0.5
SHOX-202ENST00000381575 GPA33Q99795 319 aa11.95□□□□□ -0.5
SHOX-202ENST00000381575 NUAK2Q9H093 628 aa11.95□□□□□ -0.5
SHOX-202ENST00000381575 FAM107BQ9H098 131 aa11.95□□□□□ -0.5
SHOX-202ENST00000381575 C7orf69Q9H7B7 122 aa11.95□□□□□ -0.5
SHOX-202ENST00000381575 PTTG3PQ9NZH4 202 aa11.95□□□□□ -0.5
SHOX-202ENST00000381575 OPN4Q9UHM6 478 aa11.95□□□□□ -0.5
SHOX-202ENST00000381575 ZDHHC8Q9ULC8 765 aa11.95□□□□□ -0.5
SHOX-202ENST00000381575 NPTNQ9Y639 398 aa11.95□□□□□ -0.5
SHOX-202ENST00000381575 IGHV3-64DA0A0J9YX35 117 aa11.94□□□□□ -0.5
SHOX-202ENST00000381575 DCTN6O00399 190 aa11.94□□□□□ -0.5
SHOX-202ENST00000381575 PTP4A3O75365 173 aa11.94□□□□□ -0.5
SHOX-202ENST00000381575 KHDRBS3O75525 346 aaKnown RBP11.94□□□□□ -0.5
SHOX-202ENST00000381575 PPP1R3DO95685 299 aa11.94□□□□□ -0.5
SHOX-202ENST00000381575 IGHV2-70P01814 119 aa11.94□□□□□ -0.5
SHOX-202ENST00000381575 CD55P08174 381 aa11.94□□□□□ -0.5
SHOX-202ENST00000381575 COX5BP10606 129 aa11.94□□□□□ -0.5
SHOX-202ENST00000381575 CFPP27918 469 aa11.94□□□□□ -0.5
SHOX-202ENST00000381575 CDKN2AP42771 156 aaKnown RBP11.94□□□□□ -0.5
SHOX-202ENST00000381575 OMPP47874 163 aa11.94□□□□□ -0.5
SHOX-202ENST00000381575 SLC3A1Q07837 685 aa11.94□□□□□ -0.5
SHOX-202ENST00000381575 AQP6Q13520 282 aa11.94□□□□□ -0.5
SHOX-202ENST00000381575 HSP90B2PQ58FF3 399 aa11.94□□□□□ -0.5
SHOX-202ENST00000381575 ZMAT1Q5H9K5 638 aa11.94□□□□□ -0.5
SHOX-202ENST00000381575 CORO6Q6QEF8 472 aa11.94□□□□□ -0.5
SHOX-202ENST00000381575 HACD2Q6Y1H2 254 aa11.94□□□□□ -0.5
SHOX-202ENST00000381575 PEG10Q86TG7 708 aaKnown RBP11.94□□□□□ -0.5
SHOX-202ENST00000381575 GLB1L2Q8IW92 636 aa11.94□□□□□ -0.5
SHOX-202ENST00000381575 NPEPL1Q8NDH3 523 aa11.94□□□□□ -0.5
SHOX-202ENST00000381575 OR10AD1Q8NGE0 317 aa11.94□□□□□ -0.5
SHOX-202ENST00000381575 ST7LQ8TDW4 575 aa11.94□□□□□ -0.5
SHOX-202ENST00000381575 C7orf34Q96L11 122 aa11.94□□□□□ -0.5
SHOX-202ENST00000381575 ELAC2Q9BQ52 826 aaKnown RBP11.94□□□□□ -0.5
SHOX-202ENST00000381575 ANKRD19PQ9H560 264 aa11.94□□□□□ -0.5
SHOX-202ENST00000381575 NRIP3Q9NQ35 241 aa11.94□□□□□ -0.5
SHOX-202ENST00000381575 TMEM106BQ9NUM4 274 aa11.94□□□□□ -0.5
SHOX-202ENST00000381575 TBCCD1Q9NVR7 557 aa11.94□□□□□ -0.5
SHOX-202ENST00000381575 ADA2Q9NZK5 511 aa11.94□□□□□ -0.5
SHOX-202ENST00000381575 ABCD2Q9UBJ2 740 aa11.94□□□□□ -0.5
SHOX-202ENST00000381575 CGGBP1Q9UFW8 167 aaPredicted RBP11.94□□□□□ -0.5
SHOX-202ENST00000381575 AURKCQ9UQB9 309 aa11.94□□□□□ -0.5
SHOX-202ENST00000381575 POLR1DQ9Y2S0 133 aa11.94□□□□□ -0.5
SHOX-202ENST00000381575 FAM32AQ9Y421 112 aaKnown RBP11.94□□□□□ -0.5
SHOX-202ENST00000381575 A0A0A6YYJ9 748 aa11.93□□□□□ -0.5
SHOX-202ENST00000381575 A0A1W2PRQ8 180 aa11.93□□□□□ -0.5
SHOX-202ENST00000381575 OR6C6A6NF89 314 aa11.93□□□□□ -0.5
SHOX-202ENST00000381575 UNC119BA6NIH7 251 aa11.93□□□□□ -0.5
SHOX-202ENST00000381575 ZNF205O95201 554 aa11.93□□□□□ -0.5
SHOX-202ENST00000381575 KITLGP21583 273 aa11.93□□□□□ -0.5
SHOX-202ENST00000381575 MSX2P35548 267 aaPredicted RBP11.93□□□□□ -0.5
SHOX-202ENST00000381575 LIPAP38571 399 aa11.93□□□□□ -0.5
SHOX-202ENST00000381575 HILS1P60008 231 aa11.93□□□□□ -0.5
SHOX-202ENST00000381575 SCGB2A2Q13296 93 aa11.93□□□□□ -0.5
SHOX-202ENST00000381575 DGCR6Q14129 220 aa11.93□□□□□ -0.5
SHOX-202ENST00000381575 GLYATQ6IB77 296 aa11.93□□□□□ -0.5
SHOX-202ENST00000381575 OR2T2Q6IF00 324 aa11.93□□□□□ -0.5
SHOX-202ENST00000381575 C1orf174Q8IYL3 243 aa11.93□□□□□ -0.5
SHOX-202ENST00000381575 OR1F12Q8NHA8 337 aa11.93□□□□□ -0.5
SHOX-202ENST00000381575 OR2V2Q96R30 315 aa11.93□□□□□ -0.5
SHOX-202ENST00000381575 DIRC2Q96SL1 478 aa11.93□□□□□ -0.5
SHOX-202ENST00000381575 NDEL1Q9GZM8 345 aa11.93□□□□□ -0.5
SHOX-202ENST00000381575 WDR76Q9H967 626 aa11.93□□□□□ -0.5
SHOX-202ENST00000381575 ESM1Q9NQ30 184 aa11.93□□□□□ -0.5
SHOX-202ENST00000381575 MMP26Q9NRE1 261 aa11.93□□□□□ -0.5
SHOX-202ENST00000381575 VSX1Q9NZR4 365 aaPredicted RBP11.93□□□□□ -0.5
SHOX-202ENST00000381575 RPS6KA6Q9UK32 745 aa11.93□□□□□ -0.5
SHOX-202ENST00000381575 J3QLI3 93 aa11.92□□□□□ -0.5
SHOX-202ENST00000381575 RHCEP18577 417 aa11.92□□□□□ -0.5
SHOX-202ENST00000381575 TNFSF4P23510 183 aa11.92□□□□□ -0.5
SHOX-202ENST00000381575 ZMYND11Q15326 602 aa11.92□□□□□ -0.5
SHOX-202ENST00000381575 GPR139Q6DWJ6 353 aa11.92□□□□□ -0.5
SHOX-202ENST00000381575 ZER1Q7Z7L7 766 aa11.92□□□□□ -0.5
SHOX-202ENST00000381575 BPIFB2Q8N4F0 458 aa11.92□□□□□ -0.5
SHOX-202ENST00000381575 BHLHE23Q8NDY6 225 aa11.92□□□□□ -0.5
SHOX-202ENST00000381575 NANPQ8TBE9 248 aa11.92□□□□□ -0.5
SHOX-202ENST00000381575 FANK1Q8TC84 345 aa11.92□□□□□ -0.5
SHOX-202ENST00000381575 SIGLEC11Q96RL6 698 aa11.92□□□□□ -0.5
SHOX-202ENST00000381575 GPX7Q96SL4 187 aaPredicted RBP11.92□□□□□ -0.5
SHOX-202ENST00000381575 MYLK2Q9H1R3 596 aa11.92□□□□□ -0.5
SHOX-202ENST00000381575 FN3KQ9H479 309 aa11.92□□□□□ -0.5
SHOX-202ENST00000381575 DCAF13Q9NV06 445 aaKnown RBP11.92□□□□□ -0.5
SHOX-202ENST00000381575 LHFPL6Q9Y693 200 aa11.92□□□□□ -0.5
SHOX-202ENST00000381575 H0YL77 283 aa11.92□□□□□ -0.5
SHOX-202ENST00000381575 TRAPPC2LH3BP13 241 aa11.92□□□□□ -0.5
SHOX-202ENST00000381575 AHCYL1O43865 530 aa11.92□□□□□ -0.5
SHOX-202ENST00000381575 FSHBP01225 129 aa11.92□□□□□ -0.5
SHOX-202ENST00000381575 SELEP16581 610 aa11.92□□□□□ -0.5
SHOX-202ENST00000381575 LSM6P62312 80 aaKnown RBP11.92□□□□□ -0.5
SHOX-202ENST00000381575 BTG1P62324 171 aa11.92□□□□□ -0.5
SHOX-202ENST00000381575 SPIBQ01892 262 aa11.92□□□□□ -0.5
SHOX-202ENST00000381575 LEG1Q6P5S2 330 aa11.92□□□□□ -0.5
SHOX-202ENST00000381575 SMARCD3Q6STE5 483 aa11.92□□□□□ -0.5
SHOX-202ENST00000381575 ADCK1Q86TW2 530 aa11.92□□□□□ -0.5
SHOX-202ENST00000381575 LINC00346Q8IVM7 164 aa11.92□□□□□ -0.5
SHOX-202ENST00000381575 ZNF283Q8N7M2 679 aa11.92□□□□□ -0.5
SHOX-202ENST00000381575 ATG16L2Q8NAA4 619 aa11.92□□□□□ -0.5
SHOX-202ENST00000381575 DEFB108BQ8NET1 73 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms