RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 FAM24BQ8N5W8 94 aa12.49□□□□□ -0.41
SDC1-202ENST00000381150 CSNK1A1LQ8N752 337 aa12.49□□□□□ -0.41
SDC1-202ENST00000381150 WDSUB1Q8N9V3 476 aa12.49□□□□□ -0.41
SDC1-202ENST00000381150 ADAD2Q8NCV1 583 aaKnown RBP12.49□□□□□ -0.41
SDC1-202ENST00000381150 BHLHE23Q8NDY6 225 aa12.49□□□□□ -0.41
SDC1-202ENST00000381150 SLC25A36Q96CQ1 311 aa12.49□□□□□ -0.41
SDC1-202ENST00000381150 SEH1LQ96EE3 360 aa12.49□□□□□ -0.41
SDC1-202ENST00000381150 SERINC2Q96SA4 455 aa12.49□□□□□ -0.41
SDC1-202ENST00000381150 ELOVL3Q9HB03 270 aa12.49□□□□□ -0.41
SDC1-202ENST00000381150 KCNG2Q9UJ96 466 aa12.49□□□□□ -0.41
SDC1-202ENST00000381150 TINAGQ9UJW2 476 aa12.49□□□□□ -0.41
SDC1-202ENST00000381150 VSIG4Q9Y279 399 aa12.49□□□□□ -0.41
SDC1-202ENST00000381150 MRPS2Q9Y399 296 aaKnown RBP12.49□□□□□ -0.41
SDC1-202ENST00000381150 A0A0B4J2E0 115 aa12.48□□□□□ -0.41
SDC1-202ENST00000381150 A0A1B0GX12 115 aa12.48□□□□□ -0.41
SDC1-202ENST00000381150 METTL12A8MUP2 240 aa12.48□□□□□ -0.41
SDC1-202ENST00000381150 EIF1AYO14602 144 aaKnown RBP12.48□□□□□ -0.41
SDC1-202ENST00000381150 EIF1BO60739 113 aaKnown RBP12.48□□□□□ -0.41
SDC1-202ENST00000381150 CSTAP01040 98 aa12.48□□□□□ -0.41
SDC1-202ENST00000381150 PMP2P02689 132 aa12.48□□□□□ -0.41
SDC1-202ENST00000381150 CT62P0C5K7 136 aa12.48□□□□□ -0.41
SDC1-202ENST00000381150 PVRP15151 417 aa12.48□□□□□ -0.41
SDC1-202ENST00000381150 ABOP16442 354 aa12.48□□□□□ -0.41
SDC1-202ENST00000381150 HNRNPA2B1P22626 353 aaKnown RBP12.48□□□□□ -0.41
SDC1-202ENST00000381150 EIF1P41567 113 aaKnown RBP12.48□□□□□ -0.41
SDC1-202ENST00000381150 DNASE1L1P49184 302 aa12.48□□□□□ -0.41
SDC1-202ENST00000381150 GPR18Q14330 331 aa12.48□□□□□ -0.41
SDC1-202ENST00000381150 FIGLAQ6QHK4 219 aa12.48□□□□□ -0.41
SDC1-202ENST00000381150 OR52R1Q8NGF1 315 aa12.48□□□□□ -0.41
SDC1-202ENST00000381150 SECTM1Q8WVN6 248 aa12.48□□□□□ -0.41
SDC1-202ENST00000381150 GRHPRQ9UBQ7 328 aa12.48□□□□□ -0.41
SDC1-202ENST00000381150 CKLFQ9UBR5 152 aa12.48□□□□□ -0.41
SDC1-202ENST00000381150 A0A087WV62 115 aa12.48□□□□□ -0.41
SDC1-202ENST00000381150 HTR3BO95264 441 aa12.48□□□□□ -0.41
SDC1-202ENST00000381150 NUDT14O95848 222 aa12.48□□□□□ -0.41
SDC1-202ENST00000381150 PSMB6P28072 239 aa12.48□□□□□ -0.41
SDC1-202ENST00000381150 CD1CP29017 333 aa12.48□□□□□ -0.41
SDC1-202ENST00000381150 RIPPLY1Q0D2K3 151 aa12.48□□□□□ -0.41
SDC1-202ENST00000381150 MEP1BQ16820 701 aa12.48□□□□□ -0.41
SDC1-202ENST00000381150 LCN10Q6JVE6 187 aa12.48□□□□□ -0.41
SDC1-202ENST00000381150 PAPD4Q6PIY7 484 aaKnown RBP12.48□□□□□ -0.41
SDC1-202ENST00000381150 CLEC9AQ6UXN8 241 aa12.48□□□□□ -0.41
SDC1-202ENST00000381150 MDGA2Q7Z553 956 aa12.48□□□□□ -0.41
SDC1-202ENST00000381150 MARCH3Q86UD3 253 aa12.48□□□□□ -0.41
SDC1-202ENST00000381150 OR51A2Q8NGJ7 313 aa12.48□□□□□ -0.41
SDC1-202ENST00000381150 S100PBPQ96BU1 408 aa12.48□□□□□ -0.41
SDC1-202ENST00000381150 CMTM3Q96MX0 182 aa12.48□□□□□ -0.41
SDC1-202ENST00000381150 AMELYQ99218 206 aa12.48□□□□□ -0.41
SDC1-202ENST00000381150 EIF5A2Q9GZV4 153 aaKnown RBP12.48□□□□□ -0.41
SDC1-202ENST00000381150 ACKR4Q9NPB9 350 aa12.48□□□□□ -0.41
SDC1-202ENST00000381150 SMCO4Q9NRQ5 59 aa12.48□□□□□ -0.41
SDC1-202ENST00000381150 ASH2LQ9UBL3 628 aa12.48□□□□□ -0.41
SDC1-202ENST00000381150 A0A1W2PPH5 198 aa12.47□□□□□ -0.41
SDC1-202ENST00000381150 STK17BO94768 372 aa12.47□□□□□ -0.41
SDC1-202ENST00000381150 GLCEO94923 617 aa12.47□□□□□ -0.41
SDC1-202ENST00000381150 RNF224P0DH78 156 aa12.47□□□□□ -0.41
SDC1-202ENST00000381150 RCC1P18754 421 aaPredicted RBP12.47□□□□□ -0.41
SDC1-202ENST00000381150 GPR143P51810 404 aa12.47□□□□□ -0.41
SDC1-202ENST00000381150 BIKQ13323 160 aa12.47□□□□□ -0.41
SDC1-202ENST00000381150 TRAPPC6BQ86SZ2 158 aa12.47□□□□□ -0.41
SDC1-202ENST00000381150 SFTPA2Q8IWL1 248 aa12.47□□□□□ -0.41
SDC1-202ENST00000381150 FAM174AQ8TBP5 190 aa12.47□□□□□ -0.41
SDC1-202ENST00000381150 PATE1Q8WXA2 126 aa12.47□□□□□ -0.41
SDC1-202ENST00000381150 RHOVQ96L33 236 aa12.47□□□□□ -0.41
SDC1-202ENST00000381150 NRIP2Q9BQI9 281 aa12.47□□□□□ -0.41
SDC1-202ENST00000381150 TAS2R4Q9NYW5 299 aa12.47□□□□□ -0.41
SDC1-202ENST00000381150 ATXN7L1Q9ULK2 861 aaPredicted RBP12.47□□□□□ -0.41
SDC1-202ENST00000381150 DHDHQ9UQ10 334 aa12.47□□□□□ -0.41
SDC1-202ENST00000381150 PCDHGA1Q9Y5H4 931 aa12.47□□□□□ -0.41
SDC1-202ENST00000381150 LOC100289279A0A1B0GTE1 492 aa12.47□□□□□ -0.41
SDC1-202ENST00000381150 MSGN1A6NI15 193 aa12.47□□□□□ -0.41
SDC1-202ENST00000381150 SHISA7A6NL88 538 aa12.47□□□□□ -0.41
SDC1-202ENST00000381150 RNASEK-C17orf49H0YIS7 233 aa12.47□□□□□ -0.41
SDC1-202ENST00000381150 THBS1P07996 1170 aa12.47□□□□□ -0.41
SDC1-202ENST00000381150 HOXB5P09067 269 aa12.47□□□□□ -0.41
SDC1-202ENST00000381150 CDRT4Q8N9R6 151 aa12.47□□□□□ -0.41
SDC1-202ENST00000381150 TMEM52Q8NDY8 209 aa12.47□□□□□ -0.41
SDC1-202ENST00000381150 SLC41A2Q96JW4 573 aa12.47□□□□□ -0.41
SDC1-202ENST00000381150 SLC25A21Q9BQT8 299 aaPredicted RBP12.47□□□□□ -0.41
SDC1-202ENST00000381150 FN3KRPQ9HA64 309 aa12.47□□□□□ -0.41
SDC1-202ENST00000381150 MED12Q93074 2177 aa12.47□□□□□ -0.41
SDC1-202ENST00000381150 HOXB1P14653 301 aaPredicted RBP12.47□□□□□ -0.41
SDC1-202ENST00000381150 LTBRP36941 435 aa12.47□□□□□ -0.41
SDC1-202ENST00000381150 EIF1AXP47813 144 aaKnown RBP12.47□□□□□ -0.41
SDC1-202ENST00000381150 PJVKQ0ZLH3 352 aa12.47□□□□□ -0.41
SDC1-202ENST00000381150 ELOCQ15369 112 aa12.47□□□□□ -0.41
SDC1-202ENST00000381150 ALG10Q5BKT4 473 aa12.47□□□□□ -0.41
SDC1-202ENST00000381150 PPP1R3BQ86XI6 285 aa12.47□□□□□ -0.41
SDC1-202ENST00000381150 MARCH1Q8TCQ1 289 aa12.47□□□□□ -0.41
SDC1-202ENST00000381150 PIK3IP1Q96FE7 263 aa12.47□□□□□ -0.41
SDC1-202ENST00000381150 SLC25A44Q96H78 314 aaPredicted RBP12.47□□□□□ -0.41
SDC1-202ENST00000381150 RGCCQ9H4X1 137 aa12.47□□□□□ -0.41
SDC1-202ENST00000381150 ENTPD2Q9Y5L3 495 aa12.47□□□□□ -0.41
SDC1-202ENST00000381150 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.46□□□□□ -0.41
SDC1-202ENST00000381150 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.46□□□□□ -0.41
SDC1-202ENST00000381150 SCGB1D2O95969 90 aa12.46□□□□□ -0.41
SDC1-202ENST00000381150 ITGB2P05107 769 aa12.46□□□□□ -0.41
SDC1-202ENST00000381150 ZNF44P15621 663 aa12.46□□□□□ -0.41
SDC1-202ENST00000381150 HRH1P35367 487 aa12.46□□□□□ -0.41
SDC1-202ENST00000381150 NPY4RP50391 375 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms