RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 THEM6Q8WUY1 208 aa16.31■□□□□ 0.2
SMN2-202ENST00000380742 GGHQ92820 318 aa16.31■□□□□ 0.2
SMN2-202ENST00000380742 SLAMF6Q96DU3 332 aa16.31■□□□□ 0.2
SMN2-202ENST00000380742 PLPPR2Q96GM1 343 aa16.31■□□□□ 0.2
SMN2-202ENST00000380742 TBX5Q99593 518 aa16.31■□□□□ 0.2
SMN2-202ENST00000380742 LAMP5Q9UJQ1 280 aa16.31■□□□□ 0.2
SMN2-202ENST00000380742 FBXL3Q9UKT7 428 aa16.31■□□□□ 0.2
SMN2-202ENST00000380742 LRRC42Q9Y546 428 aa16.31■□□□□ 0.2
SMN2-202ENST00000380742 CRYBG3Q68DQ2 2970 aa16.31■□□□□ 0.2
SMN2-202ENST00000380742 LOC100509620A0A075B734 347 aa16.3■□□□□ 0.2
SMN2-202ENST00000380742 IQCMA0A1B0GVH7 501 aa16.3■□□□□ 0.2
SMN2-202ENST00000380742 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.3■□□□□ 0.2
SMN2-202ENST00000380742 FAM20BO75063 409 aa16.3■□□□□ 0.2
SMN2-202ENST00000380742 LYNP07948 512 aa16.3■□□□□ 0.2
SMN2-202ENST00000380742 OR2T7P0C7T2 308 aa16.3■□□□□ 0.2
SMN2-202ENST00000380742 CCL2P13500 99 aa16.3■□□□□ 0.2
SMN2-202ENST00000380742 CD40P25942 277 aa16.3■□□□□ 0.2
SMN2-202ENST00000380742 STOMP27105 288 aa16.3■□□□□ 0.2
SMN2-202ENST00000380742 LOXP28300 417 aaPredicted RBP16.3■□□□□ 0.2
SMN2-202ENST00000380742 CXCR4P61073 352 aa16.3■□□□□ 0.2
SMN2-202ENST00000380742 BSPH1Q075Z2 132 aa16.3■□□□□ 0.2
SMN2-202ENST00000380742 RAB40BQ12829 278 aa16.3■□□□□ 0.2
SMN2-202ENST00000380742 DAZAP2Q15038 168 aaPredicted RBP16.3■□□□□ 0.2
SMN2-202ENST00000380742 KLHL22Q53GT1 634 aa16.3■□□□□ 0.2
SMN2-202ENST00000380742 NCMAPQ5T1S8 102 aa16.3■□□□□ 0.2
SMN2-202ENST00000380742 SPATC1Q76KD6 591 aa16.3■□□□□ 0.2
SMN2-202ENST00000380742 SLC30A7Q8NEW0 376 aa16.3■□□□□ 0.2
SMN2-202ENST00000380742 OR10H4Q8NGA5 316 aa16.3■□□□□ 0.2
SMN2-202ENST00000380742 OR52I1Q8NGK6 324 aa16.3■□□□□ 0.2
SMN2-202ENST00000380742 OR2T27Q8NH04 317 aa16.3■□□□□ 0.2
SMN2-202ENST00000380742 OR1F12Q8NHA8 337 aa16.3■□□□□ 0.2
SMN2-202ENST00000380742 SLC7A6Q92536 515 aa16.3■□□□□ 0.2
SMN2-202ENST00000380742 HDHD2Q9H0R4 259 aa16.3■□□□□ 0.2
SMN2-202ENST00000380742 SLC24A3Q9HC58 644 aa16.3■□□□□ 0.2
SMN2-202ENST00000380742 KCNN3Q9UGI6 736 aa16.3■□□□□ 0.2
SMN2-202ENST00000380742 MYRFQ9Y2G1 1151 aa16.3■□□□□ 0.2
SMN2-202ENST00000380742 DCHS2Q6V1P9 2916 aa16.3■□□□□ 0.2
SMN2-202ENST00000380742 PRR32B1ATL7 298 aa16.29■□□□□ 0.2
SMN2-202ENST00000380742 SLC1A7O00341 560 aa16.29■□□□□ 0.2
SMN2-202ENST00000380742 ADRA2AP08913 450 aa16.29■□□□□ 0.2
SMN2-202ENST00000380742 COX5BP10606 129 aa16.29■□□□□ 0.2
SMN2-202ENST00000380742 COX6B1P14854 86 aa16.29■□□□□ 0.2
SMN2-202ENST00000380742 PTAFRP25105 342 aa16.29■□□□□ 0.2
SMN2-202ENST00000380742 HTR5AP47898 357 aa16.29■□□□□ 0.2
SMN2-202ENST00000380742 NAAAQ02083 359 aa16.29■□□□□ 0.2
SMN2-202ENST00000380742 MED21Q13503 144 aa16.29■□□□□ 0.2
SMN2-202ENST00000380742 RSPO1Q2MKA7 263 aaPredicted RBP16.29■□□□□ 0.2
SMN2-202ENST00000380742 BEX5Q5H9J7 111 aa16.29■□□□□ 0.2
SMN2-202ENST00000380742 TMEM108Q6UXF1 575 aa16.29■□□□□ 0.2
SMN2-202ENST00000380742 SSX6Q7RTT6 188 aa16.29■□□□□ 0.2
SMN2-202ENST00000380742 PAQR4Q8N4S7 273 aaPredicted RBP16.29■□□□□ 0.2
SMN2-202ENST00000380742 RNF133Q8WVZ7 376 aa16.29■□□□□ 0.2
SMN2-202ENST00000380742 POM121L2Q96KW2 1035 aa16.29■□□□□ 0.2
SMN2-202ENST00000380742 MNTQ99583 582 aa16.29■□□□□ 0.2
SMN2-202ENST00000380742 ATF6BQ99941 703 aa16.29■□□□□ 0.2
SMN2-202ENST00000380742 TTTY10Q9BZA0 68 aa16.29■□□□□ 0.2
SMN2-202ENST00000380742 ESRP2Q9H6T0 727 aaKnown RBP16.29■□□□□ 0.2
SMN2-202ENST00000380742 FGF20Q9NP95 211 aaPredicted RBP16.29■□□□□ 0.2
SMN2-202ENST00000380742 CENPMQ9NSP4 180 aa16.29■□□□□ 0.2
SMN2-202ENST00000380742 PSORS1C1Q9UIG5 152 aa16.29■□□□□ 0.2
SMN2-202ENST00000380742 TMEM14AQ9Y6G1 99 aa16.29■□□□□ 0.2
SMN2-202ENST00000380742 CADP27708 2225 aa16.29■□□□□ 0.2
SMN2-202ENST00000380742 HRNRQ86YZ3 2850 aaPredicted RBP16.29■□□□□ 0.2
SMN2-202ENST00000380742 PKDREJQ9NTG1 2253 aa16.29■□□□□ 0.2
SMN2-202ENST00000380742 A0A1W2PQL4 384 aaPredicted RBP16.28■□□□□ 0.2
SMN2-202ENST00000380742 ZNF670-ZNF695F2Z2N8 137 aa16.28■□□□□ 0.2
SMN2-202ENST00000380742 PTHP01270 115 aa16.28■□□□□ 0.2
SMN2-202ENST00000380742 DBHP09172 617 aa16.28■□□□□ 0.2
SMN2-202ENST00000380742 ZNF35P13682 527 aa16.28■□□□□ 0.2
SMN2-202ENST00000380742 CALCRP30988 508 aa16.28■□□□□ 0.2
SMN2-202ENST00000380742 APLNRP35414 380 aa16.28■□□□□ 0.2
SMN2-202ENST00000380742 ZNF85Q03923 595 aa16.28■□□□□ 0.2
SMN2-202ENST00000380742 SPOCK1Q08629 439 aa16.28■□□□□ 0.2
SMN2-202ENST00000380742 PIK3IP1Q96FE7 263 aa16.28■□□□□ 0.2
SMN2-202ENST00000380742 HS3ST6Q96QI5 342 aa16.28■□□□□ 0.2
SMN2-202ENST00000380742 COQ7Q99807 217 aa16.28■□□□□ 0.2
SMN2-202ENST00000380742 DDX28Q9NUL7 540 aaKnown RBP16.28■□□□□ 0.2
SMN2-202ENST00000380742 FKBP14Q9NWM8 211 aa16.28■□□□□ 0.2
SMN2-202ENST00000380742 PCDHGB1Q9Y5G3 927 aa16.28■□□□□ 0.2
SMN2-202ENST00000380742 C5orf49A4QMS7 147 aa16.27■□□□□ 0.2
SMN2-202ENST00000380742 ZNF878C9JN71 531 aa16.27■□□□□ 0.2
SMN2-202ENST00000380742 PSMD9O00233 223 aa16.27■□□□□ 0.2
SMN2-202ENST00000380742 ABCD4O14678 606 aa16.27■□□□□ 0.2
SMN2-202ENST00000380742 MAGEB4O15481 346 aaPredicted RBP16.27■□□□□ 0.2
SMN2-202ENST00000380742 FADS2O95864 444 aaKnown RBP16.27■□□□□ 0.2
SMN2-202ENST00000380742 IGHA1P01876 353 aa16.27■□□□□ 0.2
SMN2-202ENST00000380742 GDI2P50395 445 aaKnown RBP16.27■□□□□ 0.2
SMN2-202ENST00000380742 CSNK2BP67870 215 aa16.27■□□□□ 0.2
SMN2-202ENST00000380742 MVKQ03426 396 aa16.27■□□□□ 0.2
SMN2-202ENST00000380742 ECH1Q13011 328 aa16.27■□□□□ 0.2
SMN2-202ENST00000380742 TBC1D28Q2M2D7 210 aa16.27■□□□□ 0.2
SMN2-202ENST00000380742 KRTAP27-1Q3LI81 207 aa16.27■□□□□ 0.2
SMN2-202ENST00000380742 LRRN1Q6UXK5 716 aa16.27■□□□□ 0.2
SMN2-202ENST00000380742 ACBD7Q8N6N7 88 aa16.27■□□□□ 0.2
SMN2-202ENST00000380742 IL17RDQ8NFM7 739 aa16.27■□□□□ 0.2
SMN2-202ENST00000380742 PAK1IP1Q9NWT1 392 aaPredicted RBP16.27■□□□□ 0.2
SMN2-202ENST00000380742 SLCO1C1Q9NYB5 712 aa16.27■□□□□ 0.2
SMN2-202ENST00000380742 CNOT2Q9NZN8 540 aaKnown RBP16.27■□□□□ 0.2
SMN2-202ENST00000380742 ATPIF1Q9UII2 106 aa16.27■□□□□ 0.2
SMN2-202ENST00000380742 IGHV2OR16-5A0A0B4J2B6 119 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms