RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 EMC9Q9Y3B6 208 aa11.27□□□□□ -0.61
VPS16-202ENST00000380445 TMEM269A0A1B0GVZ9 245 aa11.26□□□□□ -0.61
VPS16-202ENST00000380445 B4E171 279 aa11.26□□□□□ -0.61
VPS16-202ENST00000380445 H3BSH0 61 aa11.26□□□□□ -0.61
VPS16-202ENST00000380445 SRSF10O75494 262 aaKnown RBP11.26□□□□□ -0.61
VPS16-202ENST00000380445 H2AFB2P0C5Z0 115 aa11.26□□□□□ -0.61
VPS16-202ENST00000380445 UBCP0CG48 685 aaKnown RBP11.26□□□□□ -0.61
VPS16-202ENST00000380445 STOMP27105 288 aa11.26□□□□□ -0.61
VPS16-202ENST00000380445 LAP3P28838 519 aa11.26□□□□□ -0.61
VPS16-202ENST00000380445 TSPAN7P41732 249 aa11.26□□□□□ -0.61
VPS16-202ENST00000380445 SSR4P51571 173 aa11.26□□□□□ -0.61
VPS16-202ENST00000380445 TAS2R20P59543 309 aa11.26□□□□□ -0.61
VPS16-202ENST00000380445 SLC35A1P78382 337 aa11.26□□□□□ -0.61
VPS16-202ENST00000380445 INPP5JQ15735 1006 aaPredicted RBP11.26□□□□□ -0.61
VPS16-202ENST00000380445 RAB11BQ15907 218 aa11.26□□□□□ -0.61
VPS16-202ENST00000380445 ZNF239Q16600 458 aaKnown RBP11.26□□□□□ -0.61
VPS16-202ENST00000380445 KLHL24Q6TFL4 600 aa11.26□□□□□ -0.61
VPS16-202ENST00000380445 RNF133Q8WVZ7 376 aa11.26□□□□□ -0.61
VPS16-202ENST00000380445 EMC6Q9BV81 110 aa11.26□□□□□ -0.61
VPS16-202ENST00000380445 GHITMQ9H3K2 345 aa11.26□□□□□ -0.61
VPS16-202ENST00000380445 ZNF224Q9NZL3 707 aa11.26□□□□□ -0.61
VPS16-202ENST00000380445 RCE1Q9Y256 329 aa11.26□□□□□ -0.61
VPS16-202ENST00000380445 HS3ST3B1Q9Y662 390 aa11.26□□□□□ -0.61
VPS16-202ENST00000380445 NSG1A0A0A6YYJ2 146 aa11.26□□□□□ -0.61
VPS16-202ENST00000380445 LOC102725191A0A1B0GVB3 256 aa11.26□□□□□ -0.61
VPS16-202ENST00000380445 TSC22D2O75157 780 aa11.26□□□□□ -0.61
VPS16-202ENST00000380445 MT-ND4P03905 459 aa11.26□□□□□ -0.61
VPS16-202ENST00000380445 NR2C1P13056 603 aa11.26□□□□□ -0.61
VPS16-202ENST00000380445 ZNF43P17038 809 aa11.26□□□□□ -0.61
VPS16-202ENST00000380445 ACP1P24666 158 aa11.26□□□□□ -0.61
VPS16-202ENST00000380445 DNASE1L1P49184 302 aa11.26□□□□□ -0.61
VPS16-202ENST00000380445 MMP16P51512 607 aa11.26□□□□□ -0.61
VPS16-202ENST00000380445 PRAMEF20Q5VT98 475 aa11.26□□□□□ -0.61
VPS16-202ENST00000380445 ANKRD16Q6P6B7 361 aa11.26□□□□□ -0.61
VPS16-202ENST00000380445 MDGA2Q7Z553 956 aa11.26□□□□□ -0.61
VPS16-202ENST00000380445 C1orf198Q9H425 327 aa11.26□□□□□ -0.61
VPS16-202ENST00000380445 CENPMQ9NSP4 180 aa11.26□□□□□ -0.61
VPS16-202ENST00000380445 EMC3Q9P0I2 261 aa11.26□□□□□ -0.61
VPS16-202ENST00000380445 FREM3P0C091 2139 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 IGKV1D-43A0A0B4J1Z2 117 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 LOC100289279A0A1B0GTE1 492 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 GLSO94925 669 aaPredicted RBP11.25□□□□□ -0.61
VPS16-202ENST00000380445 CCR6P51684 374 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 TOMM20Q15388 145 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 TMEM176BQ3YBM2 270 aaPredicted RBP11.25□□□□□ -0.61
VPS16-202ENST00000380445 ELFN2Q5R3F8 820 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 CD276Q5ZPR3 534 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 MTFR2Q6P444 385 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 NHLRC1Q6VVB1 395 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 GPAT4Q86UL3 456 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 LINC00346Q8IVM7 164 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 GTPBP8Q8N3Z3 284 aaPredicted RBP11.25□□□□□ -0.61
VPS16-202ENST00000380445 NOXO1Q8NFA2 376 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 OR51D1Q8NGF3 324 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 OR13C3Q8NGS6 347 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 OR6X1Q8NH79 312 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 C11orf40Q8WZ69 217 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 USB1Q9BQ65 265 aaKnown RBP11.25□□□□□ -0.61
VPS16-202ENST00000380445 ANGPTL4Q9BY76 406 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 TMEM185BQ9H7F4 350 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 HRASLSQ9HDD0 168 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 TAS2R8Q9NYW2 309 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 A0A1W2PNR3 127 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 CIB4A0PJX0 185 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 ANKRD20A5PA0PJZ0 165 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 SULT2B1O00204 365 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 TLX3O43711 291 aaPredicted RBP11.25□□□□□ -0.61
VPS16-202ENST00000380445 RAD1O60671 282 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 SLC22A5O76082 557 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 ZNF883P0CG24 379 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 CSRP1P21291 193 aaKnown RBP11.25□□□□□ -0.61
VPS16-202ENST00000380445 POU3F4P49335 361 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 P2RY4P51582 365 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 CAPZA1P52907 286 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 DCAF12Q5T6F0 453 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 ZBTB37Q5TC79 503 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 LAMTOR1Q6IAA8 161 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 RHOUQ7L0Q8 258 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 OR8H3Q8N146 312 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 TMEM156Q8N614 296 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 PPP1R14AQ96A00 147 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 FAM3DQ96BQ1 224 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 HYLS1Q96M11 299 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 OR51J1Q9H342 316 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 G6PC2Q9NQR9 355 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 CYB5R1Q9UHQ9 305 aa11.25□□□□□ -0.61
VPS16-202ENST00000380445 AQP7P3A6NL99 342 aa11.24□□□□□ -0.61
VPS16-202ENST00000380445 ZNF726A6NNF4 738 aa11.24□□□□□ -0.61
VPS16-202ENST00000380445 H0YC42 278 aa11.24□□□□□ -0.61
VPS16-202ENST00000380445 PRAF2O60831 178 aa11.24□□□□□ -0.61
VPS16-202ENST00000380445 RBBP9O75884 186 aa11.24□□□□□ -0.61
VPS16-202ENST00000380445 ITGA5P08648 1049 aa11.24□□□□□ -0.61
VPS16-202ENST00000380445 PGA4P0DJD7 388 aa11.24□□□□□ -0.61
VPS16-202ENST00000380445 PGA3P0DJD8 388 aa11.24□□□□□ -0.61
VPS16-202ENST00000380445 IGFBP3P17936 291 aaPredicted RBP11.24□□□□□ -0.61
VPS16-202ENST00000380445 PSMB1P20618 241 aaKnown RBP11.24□□□□□ -0.61
VPS16-202ENST00000380445 SFTPDP35247 375 aa11.24□□□□□ -0.61
VPS16-202ENST00000380445 FAUP35544 74 aaKnown RBP11.24□□□□□ -0.61
VPS16-202ENST00000380445 DSCR4P56555 118 aaPredicted RBP11.24□□□□□ -0.61
VPS16-202ENST00000380445 ZMYND11Q15326 602 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms